RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 DECR2Q9NUI1 292 aa4.38□□□□□ -1.71
HMGN1-218ENST00000490032 FAM50BQ9Y247 325 aa4.38□□□□□ -1.71
HMGN1-218ENST00000490032 LRP12Q9Y561 859 aa4.38□□□□□ -1.71
HMGN1-218ENST00000490032 KIR2DS5A0A0G2JLQ3 304 aa4.37□□□□□ -1.71
HMGN1-218ENST00000490032 KIR2DS3K7RE56 304 aa4.37□□□□□ -1.71
HMGN1-218ENST00000490032 UGDHO60701 494 aa4.37□□□□□ -1.71
HMGN1-218ENST00000490032 NDUFB8O95169 186 aa4.37□□□□□ -1.71
HMGN1-218ENST00000490032 CBSLP0DN79 551 aa4.37□□□□□ -1.71
HMGN1-218ENST00000490032 TRIM27P14373 513 aa4.37□□□□□ -1.71
HMGN1-218ENST00000490032 AKR1A1P14550 325 aa4.37□□□□□ -1.71
HMGN1-218ENST00000490032 CBSP35520 551 aa4.37□□□□□ -1.71
HMGN1-218ENST00000490032 ERV3-1Q14264 604 aa4.37□□□□□ -1.71
HMGN1-218ENST00000490032 INPP5JQ15735 1006 aaPredicted RBP4.37□□□□□ -1.71
HMGN1-218ENST00000490032 ARL13BQ3SXY8 428 aa4.37□□□□□ -1.71
HMGN1-218ENST00000490032 TTLL5Q6EMB2 1281 aa4.37□□□□□ -1.71
HMGN1-218ENST00000490032 HIBCHQ6NVY1 386 aaPredicted RBP4.37□□□□□ -1.71
HMGN1-218ENST00000490032 C16orf89Q6UX73 402 aa4.37□□□□□ -1.71
HMGN1-218ENST00000490032 RFX8Q6ZV50 586 aa4.37□□□□□ -1.71
HMGN1-218ENST00000490032 ARL14EPQ8N8R7 260 aaPredicted RBP4.37□□□□□ -1.71
HMGN1-218ENST00000490032 C8orf48Q96LL4 319 aa4.37□□□□□ -1.71
HMGN1-218ENST00000490032 EIF3CQ99613 913 aaKnown RBP4.37□□□□□ -1.71
HMGN1-218ENST00000490032 NAA15Q9BXJ9 866 aaKnown RBP4.37□□□□□ -1.71
HMGN1-218ENST00000490032 TRIM2Q9C040 744 aa4.37□□□□□ -1.71
HMGN1-218ENST00000490032 THSD1Q9NS62 852 aa4.37□□□□□ -1.71
HMGN1-218ENST00000490032 CA14Q9ULX7 337 aa4.37□□□□□ -1.71
HMGN1-218ENST00000490032 COG5Q9UP83 839 aa4.37□□□□□ -1.71
HMGN1-218ENST00000490032 DTNAQ9Y4J8 743 aa4.37□□□□□ -1.71
HMGN1-218ENST00000490032 TRIP12Q14669 1992 aaPredicted RBP4.36□□□□□ -1.71
HMGN1-218ENST00000490032 CKAP5Q14008 2032 aa4.36□□□□□ -1.71
HMGN1-218ENST00000490032 A0A1W2PPC1 479 aa4.36□□□□□ -1.71
HMGN1-218ENST00000490032 FAM234BA2RU67 622 aa4.36□□□□□ -1.71
HMGN1-218ENST00000490032 APAF1O14727 1248 aa4.36□□□□□ -1.71
HMGN1-218ENST00000490032 NPC1O15118 1278 aa4.36□□□□□ -1.71
HMGN1-218ENST00000490032 PMM2O15305 246 aa4.36□□□□□ -1.71
HMGN1-218ENST00000490032 FGF18O76093 207 aa4.36□□□□□ -1.71
HMGN1-218ENST00000490032 RFPL3SP0C7P2 107 aa4.36□□□□□ -1.71
HMGN1-218ENST00000490032 TBXAS1P24557 533 aaPredicted RBP4.36□□□□□ -1.71
HMGN1-218ENST00000490032 TM4SF4P48230 202 aa4.36□□□□□ -1.71
HMGN1-218ENST00000490032 PMS2P11Q13670 270 aa4.36□□□□□ -1.71
HMGN1-218ENST00000490032 SEMA3AQ14563 771 aa4.36□□□□□ -1.71
HMGN1-218ENST00000490032 PGM5Q15124 567 aa4.36□□□□□ -1.71
HMGN1-218ENST00000490032 DLGAP5Q15398 846 aa4.36□□□□□ -1.71
HMGN1-218ENST00000490032 SLC35G1Q2M3R5 365 aa4.36□□□□□ -1.71
HMGN1-218ENST00000490032 LIPMQ5VYY2 423 aa4.36□□□□□ -1.71
HMGN1-218ENST00000490032 MSANTD2Q6P1R3 559 aa4.36□□□□□ -1.71
HMGN1-218ENST00000490032 ZNF549Q6P9A3 640 aa4.36□□□□□ -1.71
HMGN1-218ENST00000490032 DHRS13Q6UX07 377 aa4.36□□□□□ -1.71
HMGN1-218ENST00000490032 DPP9Q86TI2 863 aa4.36□□□□□ -1.71
HMGN1-218ENST00000490032 TXLNBQ8N3L3 684 aa4.36□□□□□ -1.71
HMGN1-218ENST00000490032 ADAMTS15Q8TE58 950 aa4.36□□□□□ -1.71
HMGN1-218ENST00000490032 NPIPB3Q92617 1050 aa4.36□□□□□ -1.71
HMGN1-218ENST00000490032 KRTAP2-2Q9BYT5 123 aa4.36□□□□□ -1.71
HMGN1-218ENST00000490032 MLXIPQ9HAP2 919 aa4.36□□□□□ -1.71
HMGN1-218ENST00000490032 FSCN3Q9NQT6 498 aa4.36□□□□□ -1.71
HMGN1-218ENST00000490032 IPO11Q9UI26 975 aaKnown RBP4.36□□□□□ -1.71
HMGN1-218ENST00000490032 B3GNT3Q9Y2A9 372 aa4.36□□□□□ -1.71
HMGN1-218ENST00000490032 UBE2J1Q9Y385 318 aaPredicted RBP4.36□□□□□ -1.71
HMGN1-218ENST00000490032 TMEM272A0A1B0GTI8 110 aa4.35□□□□□ -1.71
HMGN1-218ENST00000490032 SPTLC2O15270 562 aa4.35□□□□□ -1.71
HMGN1-218ENST00000490032 PARNO95453 639 aaKnown RBP4.35□□□□□ -1.71
HMGN1-218ENST00000490032 WNT1P04628 370 aa4.35□□□□□ -1.71
HMGN1-218ENST00000490032 ITGA5P08648 1049 aa4.35□□□□□ -1.71
HMGN1-218ENST00000490032 HARSP12081 509 aaKnown RBP4.35□□□□□ -1.71
HMGN1-218ENST00000490032 CBFBQ13951 182 aa4.35□□□□□ -1.71
HMGN1-218ENST00000490032 HLTFQ14527 1009 aaKnown RBP eCLIP4.35□□□□□ -1.71
HMGN1-218ENST00000490032 SMTNL2Q2TAL5 461 aa4.35□□□□□ -1.71
HMGN1-218ENST00000490032 PRTGQ2VWP7 1150 aa4.35□□□□□ -1.71
HMGN1-218ENST00000490032 ANXA2RQ3ZCQ2 193 aa4.35□□□□□ -1.71
HMGN1-218ENST00000490032 PIK3CD-AS1Q5SR53 167 aa4.35□□□□□ -1.71
HMGN1-218ENST00000490032 ISM2Q6H9L7 571 aa4.35□□□□□ -1.71
HMGN1-218ENST00000490032 KIAA1161Q6NSJ0 714 aa4.35□□□□□ -1.71
HMGN1-218ENST00000490032 C11orf96Q7Z7L8 435 aa4.35□□□□□ -1.71
HMGN1-218ENST00000490032 RASGRP3Q8IV61 690 aa4.35□□□□□ -1.71
HMGN1-218ENST00000490032 FAM47BQ8NA70 645 aa4.35□□□□□ -1.71
HMGN1-218ENST00000490032 PJA1Q8NG27 643 aa4.35□□□□□ -1.71
HMGN1-218ENST00000490032 OR52N4Q8NGI2 321 aa4.35□□□□□ -1.71
HMGN1-218ENST00000490032 GPR78Q96P69 363 aa4.35□□□□□ -1.71
HMGN1-218ENST00000490032 WDR83Q9BRX9 315 aaKnown RBP4.35□□□□□ -1.71
HMGN1-218ENST00000490032 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.35□□□□□ -1.71
HMGN1-218ENST00000490032 NECTIN3Q9NQS3 549 aa4.35□□□□□ -1.71
HMGN1-218ENST00000490032 J3KTA2 159 aa4.34□□□□□ -1.71
HMGN1-218ENST00000490032 KIF3BO15066 747 aa4.34□□□□□ -1.71
HMGN1-218ENST00000490032 NCK2O43639 380 aa4.34□□□□□ -1.71
HMGN1-218ENST00000490032 PPP6R2O75170 966 aa4.34□□□□□ -1.71
HMGN1-218ENST00000490032 TAF5LO75529 589 aa4.34□□□□□ -1.71
HMGN1-218ENST00000490032 SYF2O95926 243 aaKnown RBP4.34□□□□□ -1.71
HMGN1-218ENST00000490032 SRGAP2BP0DMP2 458 aa4.34□□□□□ -1.71
HMGN1-218ENST00000490032 HOXB2P14652 356 aa4.34□□□□□ -1.71
HMGN1-218ENST00000490032 TNFSF4P23510 183 aa4.34□□□□□ -1.71
HMGN1-218ENST00000490032 POLD2P49005 469 aa4.34□□□□□ -1.71
HMGN1-218ENST00000490032 CSHL1Q14406 222 aa4.34□□□□□ -1.71
HMGN1-218ENST00000490032 P3H1Q32P28 736 aa4.34□□□□□ -1.71
HMGN1-218ENST00000490032 FAM209BQ5JX69 171 aa4.34□□□□□ -1.71
HMGN1-218ENST00000490032 ASPHD1Q5U4P2 390 aa4.34□□□□□ -1.71
HMGN1-218ENST00000490032 KRT27Q7Z3Y8 459 aa4.34□□□□□ -1.71
HMGN1-218ENST00000490032 B4GALNT2Q8NHY0 566 aa4.34□□□□□ -1.71
HMGN1-218ENST00000490032 CLMNQ96JQ2 1002 aa4.34□□□□□ -1.71
HMGN1-218ENST00000490032 HIPK2Q9H2X6 1198 aa4.34□□□□□ -1.71
HMGN1-218ENST00000490032 FZD3Q9NPG1 666 aa4.34□□□□□ -1.71
HMGN1-218ENST00000490032 HELLSQ9NRZ9 838 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms