RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	FAM102A	Q5T9C2	384 aa	Predicted RBP	11.51	□□□□□ -0.57
GGA1-222	ENST00000489772	PIK3R6	Q5UE93	754 aa		11.51	□□□□□ -0.57
GGA1-222	ENST00000489772	NAA35	Q5VZE5	725 aa		11.51	□□□□□ -0.57
GGA1-222	ENST00000489772	EGFLAM	Q63HQ2	1017 aa		11.51	□□□□□ -0.57
GGA1-222	ENST00000489772	ANO7	Q6IWH7	933 aa		11.51	□□□□□ -0.57
GGA1-222	ENST00000489772	RFWD3	Q6PCD5	774 aa		11.51	□□□□□ -0.57
GGA1-222	ENST00000489772	CEP68	Q76N32	757 aa		11.51	□□□□□ -0.57
GGA1-222	ENST00000489772	ZNF557	Q8N988	423 aa	Predicted RBP	11.51	□□□□□ -0.57
GGA1-222	ENST00000489772	SLC20A1	Q8WUM9	679 aa		11.51	□□□□□ -0.57
GGA1-222	ENST00000489772	UCMA	Q8WVF2	138 aa		11.51	□□□□□ -0.57
GGA1-222	ENST00000489772	GAB3	Q8WWW8	586 aa		11.51	□□□□□ -0.57
GGA1-222	ENST00000489772	RNF34	Q969K3	372 aa		11.51	□□□□□ -0.57
GGA1-222	ENST00000489772	BTN2A3P	Q96KV6	586 aa		11.51	□□□□□ -0.57
GGA1-222	ENST00000489772	CBX8	Q9HC52	389 aa		11.51	□□□□□ -0.57
GGA1-222	ENST00000489772	ZDHHC4	Q9NPG8	344 aa		11.51	□□□□□ -0.57
GGA1-222	ENST00000489772	TMEM51	Q9NW97	253 aa		11.51	□□□□□ -0.57
GGA1-222	ENST00000489772	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	11.51	□□□□□ -0.57
GGA1-222	ENST00000489772	RRN3	Q9NYV6	651 aa		11.51	□□□□□ -0.57
GGA1-222	ENST00000489772	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	11.51	□□□□□ -0.57
GGA1-222	ENST00000489772	COX16	Q9P0S2	106 aa		11.51	□□□□□ -0.57
GGA1-222	ENST00000489772	NCDN	Q9UBB6	729 aa		11.51	□□□□□ -0.57
GGA1-222	ENST00000489772	CLEC4E	Q9ULY5	219 aa		11.51	□□□□□ -0.57
GGA1-222	ENST00000489772	STAP1	Q9ULZ2	295 aa		11.51	□□□□□ -0.57
GGA1-222	ENST00000489772		A0A1B0GTH6	734 aa		11.5	□□□□□ -0.57
GGA1-222	ENST00000489772		A0A1W2PQC6	194 aa		11.5	□□□□□ -0.57
GGA1-222	ENST00000489772	FAM170A	A1A519	330 aa		11.5	□□□□□ -0.57
GGA1-222	ENST00000489772	NPC1	O15118	1278 aa		11.5	□□□□□ -0.57
GGA1-222	ENST00000489772	ZBTB24	O43167	697 aa	Predicted RBP	11.5	□□□□□ -0.57
GGA1-222	ENST00000489772	MAP3K13	O43283	966 aa		11.5	□□□□□ -0.57
GGA1-222	ENST00000489772	TBL1X	O60907	577 aa		11.5	□□□□□ -0.57
GGA1-222	ENST00000489772	CYP1A1	P04798	512 aa	Predicted RBP	11.5	□□□□□ -0.57
GGA1-222	ENST00000489772	CHRNB2	P17787	502 aa		11.5	□□□□□ -0.57
GGA1-222	ENST00000489772	SLC6A4	P31645	630 aa		11.5	□□□□□ -0.57
GGA1-222	ENST00000489772	NOMO3	P69849	1222 aa		11.5	□□□□□ -0.57
GGA1-222	ENST00000489772	PITX1	P78337	314 aa	Predicted RBP	11.5	□□□□□ -0.57
GGA1-222	ENST00000489772	FMO1	Q01740	532 aa		11.5	□□□□□ -0.57
GGA1-222	ENST00000489772	NME3	Q13232	169 aa		11.5	□□□□□ -0.57
GGA1-222	ENST00000489772	EIF4EBP2	Q13542	120 aa	Predicted RBP	11.5	□□□□□ -0.57
GGA1-222	ENST00000489772	EIF4H	Q15056	248 aa	Known RBP	11.5	□□□□□ -0.57
GGA1-222	ENST00000489772	GEN1	Q17RS7	908 aa		11.5	□□□□□ -0.57
GGA1-222	ENST00000489772	USP39	Q53GS9	565 aa	Known RBP	11.5	□□□□□ -0.57
GGA1-222	ENST00000489772	NADSYN1	Q6IA69	706 aa		11.5	□□□□□ -0.57
GGA1-222	ENST00000489772	TMEM92	Q6UXU6	159 aa		11.5	□□□□□ -0.57
GGA1-222	ENST00000489772	LUZP1	Q86V48	1076 aa		11.5	□□□□□ -0.57
GGA1-222	ENST00000489772	RASSF3	Q86WH2	238 aa		11.5	□□□□□ -0.57
GGA1-222	ENST00000489772	XYLT1	Q86Y38	959 aa		11.5	□□□□□ -0.57
GGA1-222	ENST00000489772	CCDC117	Q8IWD4	279 aa	Predicted RBP	11.5	□□□□□ -0.57
GGA1-222	ENST00000489772	ATP6V0D2	Q8N8Y2	350 aa		11.5	□□□□□ -0.57
GGA1-222	ENST00000489772	HJURP	Q8NCD3	748 aa	Predicted RBP	11.5	□□□□□ -0.57
GGA1-222	ENST00000489772	BCCIP	Q9P287	314 aa	Known RBP eCLIP	11.5	□□□□□ -0.57
GGA1-222	ENST00000489772	GMEB2	Q9UKD1	530 aa		11.5	□□□□□ -0.57
GGA1-222	ENST00000489772	HCN2	Q9UL51	889 aa		11.5	□□□□□ -0.57
GGA1-222	ENST00000489772	RIF1	Q5UIP0	2472 aa	Known RBP	11.5	□□□□□ -0.57
GGA1-222	ENST00000489772	GPR179	Q6PRD1	2367 aa		11.49	□□□□□ -0.57
GGA1-222	ENST00000489772	TCRBV21S2A2	A0A5A6	115 aa		11.49	□□□□□ -0.57
GGA1-222	ENST00000489772	KCNU1	A8MYU2	1149 aa		11.49	□□□□□ -0.57
GGA1-222	ENST00000489772	GOLGA8S	H3BPF8	625 aa		11.49	□□□□□ -0.57
GGA1-222	ENST00000489772		M0QYT0	321 aa		11.49	□□□□□ -0.57
GGA1-222	ENST00000489772	HOXB2	P14652	356 aa		11.49	□□□□□ -0.57
GGA1-222	ENST00000489772	HNRNPL	P14866	589 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
GGA1-222	ENST00000489772	FER	P16591	822 aa		11.49	□□□□□ -0.57
GGA1-222	ENST00000489772	MMP8	P22894	467 aa		11.49	□□□□□ -0.57
GGA1-222	ENST00000489772	HLA-F	P30511	346 aa		11.49	□□□□□ -0.57
GGA1-222	ENST00000489772	WAS	P42768	502 aa		11.49	□□□□□ -0.57
GGA1-222	ENST00000489772	NSF	P46459	744 aa	Known RBP	11.49	□□□□□ -0.57
GGA1-222	ENST00000489772	SGSH	P51688	502 aa		11.49	□□□□□ -0.57
GGA1-222	ENST00000489772	NR1I3	Q14994	352 aa		11.49	□□□□□ -0.57
GGA1-222	ENST00000489772	LPAL2	Q16609	132 aa		11.49	□□□□□ -0.57
GGA1-222	ENST00000489772	C2CD6	Q53TS8	623 aa		11.49	□□□□□ -0.57
GGA1-222	ENST00000489772	MS4A13	Q5J8X5	152 aa		11.49	□□□□□ -0.57
GGA1-222	ENST00000489772	LAIR1	Q6GTX8	287 aa		11.49	□□□□□ -0.57
GGA1-222	ENST00000489772	MMS22L	Q6ZRQ5	1243 aa		11.49	□□□□□ -0.57
GGA1-222	ENST00000489772	SND1	Q7KZF4	910 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
GGA1-222	ENST00000489772	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	11.49	□□□□□ -0.57
GGA1-222	ENST00000489772	CHSY1	Q86X52	802 aa		11.49	□□□□□ -0.57
GGA1-222	ENST00000489772	MFN1	Q8IWA4	741 aa		11.49	□□□□□ -0.57
GGA1-222	ENST00000489772	PGBD3	Q8N328	593 aa		11.49	□□□□□ -0.57
GGA1-222	ENST00000489772	MDGA1	Q8NFP4	955 aa		11.49	□□□□□ -0.57
GGA1-222	ENST00000489772	WFIKKN2	Q8TEU8	576 aa		11.49	□□□□□ -0.57
GGA1-222	ENST00000489772	HMGB4	Q8WW32	186 aa		11.49	□□□□□ -0.57
GGA1-222	ENST00000489772	NAP1L5	Q96NT1	182 aa	Predicted RBP	11.49	□□□□□ -0.57
GGA1-222	ENST00000489772	ACOX2	Q99424	681 aa		11.49	□□□□□ -0.57
GGA1-222	ENST00000489772	GABRG3	Q99928	467 aa		11.49	□□□□□ -0.57
GGA1-222	ENST00000489772	CIPC	Q9C0C6	399 aa		11.49	□□□□□ -0.57
GGA1-222	ENST00000489772	NUCKS1	Q9H1E3	243 aa	Known RBP	11.49	□□□□□ -0.57
GGA1-222	ENST00000489772	SEPT11	Q9NVA2	429 aa	Known RBP	11.49	□□□□□ -0.57
GGA1-222	ENST00000489772	ELOVL2	Q9NXB9	296 aa		11.49	□□□□□ -0.57
GGA1-222	ENST00000489772	CACNA2D2	Q9NY47	1150 aa		11.49	□□□□□ -0.57
GGA1-222	ENST00000489772	STIM2	Q9P246	746 aa		11.49	□□□□□ -0.57
GGA1-222	ENST00000489772	MYO6	Q9UM54	1294 aa		11.49	□□□□□ -0.57
GGA1-222	ENST00000489772	PAXBP1	Q9Y5B6	917 aa		11.49	□□□□□ -0.57
GGA1-222	ENST00000489772		F5H5T6	163 aa		11.48	□□□□□ -0.57
GGA1-222	ENST00000489772	F9	P00740	461 aa		11.48	□□□□□ -0.57
GGA1-222	ENST00000489772	UNG	P13051	313 aa	Predicted RBP	11.48	□□□□□ -0.57
GGA1-222	ENST00000489772	TACR2	P21452	398 aa		11.48	□□□□□ -0.57
GGA1-222	ENST00000489772	SULT1E1	P49888	294 aa		11.48	□□□□□ -0.57
GGA1-222	ENST00000489772	RPS24	P62847	133 aa	Known RBP	11.48	□□□□□ -0.57
GGA1-222	ENST00000489772	CDH18	Q13634	790 aa		11.48	□□□□□ -0.57
GGA1-222	ENST00000489772	SLC25A52	Q3SY17	297 aa		11.48	□□□□□ -0.57
GGA1-222	ENST00000489772	RAP1GAP2	Q684P5	730 aa		11.48	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms