RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 LEMD2Q8NC56 503 aa14.65□□□□□ -0.06
VPS26A-205ENST00000489656 SLC35B2Q8TB61 432 aa14.65□□□□□ -0.06
VPS26A-205ENST00000489656 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.65□□□□□ -0.06
VPS26A-205ENST00000489656 GDPD5Q8WTR4 605 aa14.65□□□□□ -0.06
VPS26A-205ENST00000489656 NKD2Q969F2 451 aaPredicted RBP14.65□□□□□ -0.06
VPS26A-205ENST00000489656 AZIN2Q96A70 460 aa14.65□□□□□ -0.06
VPS26A-205ENST00000489656 PLD4Q96BZ4 506 aa14.65□□□□□ -0.06
VPS26A-205ENST00000489656 LRRC1Q9BTT6 524 aa14.65□□□□□ -0.06
VPS26A-205ENST00000489656 ANKZF1Q9H8Y5 726 aa14.65□□□□□ -0.06
VPS26A-205ENST00000489656 ASAH2Q9NR71 780 aa14.65□□□□□ -0.06
VPS26A-205ENST00000489656 ARHGEF4Q9NR80 690 aa14.65□□□□□ -0.06
VPS26A-205ENST00000489656 OR12D3Q9UGF7 316 aa14.65□□□□□ -0.06
VPS26A-205ENST00000489656 SLC12A6Q9UHW9 1150 aa14.65□□□□□ -0.06
VPS26A-205ENST00000489656 FEZ2Q9UHY8 353 aaPredicted RBP14.65□□□□□ -0.06
VPS26A-205ENST00000489656 DRG1Q9Y295 367 aaKnown RBP14.65□□□□□ -0.06
VPS26A-205ENST00000489656 HCFC2Q9Y5Z7 792 aa14.65□□□□□ -0.06
VPS26A-205ENST00000489656 FAM187AA6NFU0 413 aa14.64□□□□□ -0.07
VPS26A-205ENST00000489656 FAM72CH0Y354 149 aa14.64□□□□□ -0.07
VPS26A-205ENST00000489656 CCL16O15467 120 aa14.64□□□□□ -0.07
VPS26A-205ENST00000489656 RAD51CO43502 376 aa14.64□□□□□ -0.07
VPS26A-205ENST00000489656 LIASO43766 372 aa14.64□□□□□ -0.07
VPS26A-205ENST00000489656 XYLBO75191 536 aa14.64□□□□□ -0.07
VPS26A-205ENST00000489656 PTPN2P17706 415 aa14.64□□□□□ -0.07
VPS26A-205ENST00000489656 GABRR2P28476 465 aa14.64□□□□□ -0.07
VPS26A-205ENST00000489656 PTGIRP43119 386 aa14.64□□□□□ -0.07
VPS26A-205ENST00000489656 NR2C2P49116 596 aa14.64□□□□□ -0.07
VPS26A-205ENST00000489656 TPI1P60174 286 aa14.64□□□□□ -0.07
VPS26A-205ENST00000489656 KCNC3Q14003 757 aa14.64□□□□□ -0.07
VPS26A-205ENST00000489656 NOMO1Q15155 1222 aa14.64□□□□□ -0.07
VPS26A-205ENST00000489656 OASLQ15646 514 aaKnown RBP14.64□□□□□ -0.07
VPS26A-205ENST00000489656 ELF2Q15723 593 aa14.64□□□□□ -0.07
VPS26A-205ENST00000489656 ARTNQ5T4W7 220 aa14.64□□□□□ -0.07
VPS26A-205ENST00000489656 FAM72AQ5TYM5 149 aa14.64□□□□□ -0.07
VPS26A-205ENST00000489656 FAM72DQ6L9T8 149 aa14.64□□□□□ -0.07
VPS26A-205ENST00000489656 RFX8Q6ZV50 586 aa14.64□□□□□ -0.07
VPS26A-205ENST00000489656 ADGRD2Q7Z7M1 963 aa14.64□□□□□ -0.07
VPS26A-205ENST00000489656 FAM72BQ86X60 149 aa14.64□□□□□ -0.07
VPS26A-205ENST00000489656 MIB1Q86YT6 1006 aa14.64□□□□□ -0.07
VPS26A-205ENST00000489656 ACTL9Q8TC94 416 aa14.64□□□□□ -0.07
VPS26A-205ENST00000489656 GRK7Q8WTQ7 553 aa14.64□□□□□ -0.07
VPS26A-205ENST00000489656 C1orf54Q8WWF1 131 aa14.64□□□□□ -0.07
VPS26A-205ENST00000489656 MRPS31Q92665 395 aaKnown RBP14.64□□□□□ -0.07
VPS26A-205ENST00000489656 MRPL38Q96DV4 380 aaKnown RBP14.64□□□□□ -0.07
VPS26A-205ENST00000489656 BTN2A3PQ96KV6 586 aa14.64□□□□□ -0.07
VPS26A-205ENST00000489656 KLF16Q9BXK1 252 aaPredicted RBP14.64□□□□□ -0.07
VPS26A-205ENST00000489656 PRKD2Q9BZL6 878 aa14.64□□□□□ -0.07
VPS26A-205ENST00000489656 TLE6Q9H808 572 aa14.64□□□□□ -0.07
VPS26A-205ENST00000489656 AMACRQ9UHK6 382 aa14.64□□□□□ -0.07
VPS26A-205ENST00000489656 MYO18AQ92614 2054 aaKnown RBP14.64□□□□□ -0.07
VPS26A-205ENST00000489656 DENND4AQ7Z401 1863 aa14.63□□□□□ -0.07
VPS26A-205ENST00000489656 A0A1W2PPC1 479 aa14.63□□□□□ -0.07
VPS26A-205ENST00000489656 C2orf78A6NCI8 922 aa14.63□□□□□ -0.07
VPS26A-205ENST00000489656 DCLK1O15075 740 aa14.63□□□□□ -0.07
VPS26A-205ENST00000489656 CREB3O43889 395 aa14.63□□□□□ -0.07
VPS26A-205ENST00000489656 RFPL2O75678 378 aa14.63□□□□□ -0.07
VPS26A-205ENST00000489656 LRIG2O94898 1065 aa14.63□□□□□ -0.07
VPS26A-205ENST00000489656 ITGAVP06756 1048 aa14.63□□□□□ -0.07
VPS26A-205ENST00000489656 RHOXF2BP0C7M4 288 aa14.63□□□□□ -0.07
VPS26A-205ENST00000489656 DDX6P26196 483 aaKnown RBP eCLIP14.63□□□□□ -0.07
VPS26A-205ENST00000489656 VCPP55072 806 aaKnown RBP14.63□□□□□ -0.07
VPS26A-205ENST00000489656 MLLT6P55198 1093 aaPredicted RBP14.63□□□□□ -0.07
VPS26A-205ENST00000489656 DYNLT1P63172 113 aa14.63□□□□□ -0.07
VPS26A-205ENST00000489656 DR1Q01658 176 aa14.63□□□□□ -0.07
VPS26A-205ENST00000489656 OTUD4Q01804 1114 aaKnown RBP14.63□□□□□ -0.07
VPS26A-205ENST00000489656 LMNB2Q03252 620 aa14.63□□□□□ -0.07
VPS26A-205ENST00000489656 BYSLQ13895 437 aaKnown RBP14.63□□□□□ -0.07
VPS26A-205ENST00000489656 PAFAH1B3Q15102 231 aaKnown RBP14.63□□□□□ -0.07
VPS26A-205ENST00000489656 NCBP2-AS2Q69YL0 99 aa14.63□□□□□ -0.07
VPS26A-205ENST00000489656 WDR93Q6P2C0 686 aa14.63□□□□□ -0.07
VPS26A-205ENST00000489656 SYDE1Q6ZW31 735 aaPredicted RBP14.63□□□□□ -0.07
VPS26A-205ENST00000489656 ATL2Q8NHH9 583 aa14.63□□□□□ -0.07
VPS26A-205ENST00000489656 ATG4AQ8WYN0 398 aa14.63□□□□□ -0.07
VPS26A-205ENST00000489656 PPP2R3CQ969Q6 453 aa14.63□□□□□ -0.07
VPS26A-205ENST00000489656 GCNAQ96QF7 691 aa14.63□□□□□ -0.07
VPS26A-205ENST00000489656 RHOXF2Q9BQY4 288 aa14.63□□□□□ -0.07
VPS26A-205ENST00000489656 CORO1BQ9BR76 489 aa14.63□□□□□ -0.07
VPS26A-205ENST00000489656 NACA2Q9H009 215 aa14.63□□□□□ -0.07
VPS26A-205ENST00000489656 RNF38Q9H0F5 515 aa14.63□□□□□ -0.07
VPS26A-205ENST00000489656 STIM2Q9P246 746 aa14.63□□□□□ -0.07
VPS26A-205ENST00000489656 NEU3Q9UQ49 428 aa14.63□□□□□ -0.07
VPS26A-205ENST00000489656 RAD54BQ9Y620 910 aa14.63□□□□□ -0.07
VPS26A-205ENST00000489656 HS3ST4Q9Y661 456 aa14.63□□□□□ -0.07
VPS26A-205ENST00000489656 KIF26AQ9ULI4 1882 aaPredicted RBP14.63□□□□□ -0.07
VPS26A-205ENST00000489656 DYNC1I1O14576 645 aa14.62□□□□□ -0.07
VPS26A-205ENST00000489656 PER2O15055 1255 aa14.62□□□□□ -0.07
VPS26A-205ENST00000489656 MCF2LO15068 1137 aa14.62□□□□□ -0.07
VPS26A-205ENST00000489656 FGF10O15520 208 aaPredicted RBP14.62□□□□□ -0.07
VPS26A-205ENST00000489656 LATS1O95835 1130 aa14.62□□□□□ -0.07
VPS26A-205ENST00000489656 PECAM1P16284 738 aaPredicted RBP14.62□□□□□ -0.07
VPS26A-205ENST00000489656 AMPD1P23109 780 aa14.62□□□□□ -0.07
VPS26A-205ENST00000489656 MCM3P25205 808 aa14.62□□□□□ -0.07
VPS26A-205ENST00000489656 TNFRSF8P28908 595 aa14.62□□□□□ -0.07
VPS26A-205ENST00000489656 SLC7A9P82251 487 aa14.62□□□□□ -0.07
VPS26A-205ENST00000489656 XRCC4Q13426 336 aa14.62□□□□□ -0.07
VPS26A-205ENST00000489656 PIK3R6Q5UE93 754 aa14.62□□□□□ -0.07
VPS26A-205ENST00000489656 CCDC105Q8IYK2 499 aa14.62□□□□□ -0.07
VPS26A-205ENST00000489656 ZNF683Q8IZ20 524 aa14.62□□□□□ -0.07
VPS26A-205ENST00000489656 SEC14L1Q92503 715 aa14.62□□□□□ -0.07
VPS26A-205ENST00000489656 P3H4Q92791 437 aa14.62□□□□□ -0.07
VPS26A-205ENST00000489656 ZNF707Q96C28 371 aaPredicted RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms