RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 DNASE1L2Q92874 299 aa8.59□□□□□ -1.03
SF1-218ENST00000489544 ATP2A3Q93084 1043 aa8.59□□□□□ -1.03
SF1-218ENST00000489544 PDLIM2Q96JY6 352 aa8.59□□□□□ -1.03
SF1-218ENST00000489544 PRICKLE1Q96MT3 831 aaPredicted RBP8.59□□□□□ -1.03
SF1-218ENST00000489544 PEBP4Q96S96 227 aa8.59□□□□□ -1.03
SF1-218ENST00000489544 BBS2Q9BXC9 721 aa8.59□□□□□ -1.03
SF1-218ENST00000489544 FOXQ1Q9C009 403 aa8.59□□□□□ -1.03
SF1-218ENST00000489544 LACRTQ9GZZ8 138 aa8.59□□□□□ -1.03
SF1-218ENST00000489544 GOLPH3Q9H4A6 298 aa8.59□□□□□ -1.03
SF1-218ENST00000489544 FBRSL1Q9HCM7 1045 aaKnown RBP8.59□□□□□ -1.03
SF1-218ENST00000489544 MRPL47Q9HD33 250 aaKnown RBP8.59□□□□□ -1.03
SF1-218ENST00000489544 ARHGEF3Q9NR81 526 aa8.59□□□□□ -1.03
SF1-218ENST00000489544 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.59□□□□□ -1.03
SF1-218ENST00000489544 GPATCH2LQ9NWQ4 482 aa8.59□□□□□ -1.03
SF1-218ENST00000489544 ARHGEF38Q9NXL2 777 aa8.59□□□□□ -1.03
SF1-218ENST00000489544 RRN3Q9NYV6 651 aa8.59□□□□□ -1.03
SF1-218ENST00000489544 STIM2Q9P246 746 aa8.59□□□□□ -1.03
SF1-218ENST00000489544 TRIM10Q9UDY6 481 aa8.59□□□□□ -1.03
SF1-218ENST00000489544 RAPGEFL1Q9UHV5 662 aa8.59□□□□□ -1.03
SF1-218ENST00000489544 SALL4Q9UJQ4 1053 aa8.59□□□□□ -1.03
SF1-218ENST00000489544 MTF2Q9Y483 593 aaPredicted RBP8.59□□□□□ -1.03
SF1-218ENST00000489544 HYOU1Q9Y4L1 999 aa8.59□□□□□ -1.03
SF1-218ENST00000489544 HS3ST4Q9Y661 456 aa8.59□□□□□ -1.03
SF1-218ENST00000489544 KIF26AQ9ULI4 1882 aaPredicted RBP8.59□□□□□ -1.03
SF1-218ENST00000489544 COL4A2P08572 1712 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 FAM72CH0Y354 149 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 GFRA2O00451 464 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 BUB1O43683 1085 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 LRCH4O75427 683 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 F9P00740 461 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 PTMAP06454 111 aaKnown RBP8.58□□□□□ -1.04
SF1-218ENST00000489544 TYRP14679 529 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 TACR2P21452 398 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 IL1R2P27930 398 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 MIPP30301 263 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 ADRA1BP35368 520 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 OPRD1P41143 372 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 GALK1P51570 392 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 PFKPQ01813 784 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 KDSRQ06136 332 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 SIGLEC14Q08ET2 396 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 AUHQ13825 339 aaKnown RBP8.58□□□□□ -1.04
SF1-218ENST00000489544 MESDQ14696 234 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 PON2Q15165 354 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 CA9Q16790 459 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 ARTNQ5T4W7 220 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 FAM72AQ5TYM5 149 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 FYB2Q5VWT5 728 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 ASTLQ6HA08 431 aaPredicted RBP8.58□□□□□ -1.04
SF1-218ENST00000489544 FAM72DQ6L9T8 149 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 FBXL22Q6P050 247 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 TRIM67Q6ZTA4 783 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 STRADAQ7RTN6 431 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 FAM72BQ86X60 149 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 FAM217AQ8IXS0 508 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 LGI2Q8N0V4 545 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 CPXM2Q8N436 756 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 ATP6V0D2Q8N8Y2 350 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 FLCNQ8NFG4 579 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 WFDC5Q8TCV5 224 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 DDI1Q8WTU0 396 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 RFFLQ8WZ73 363 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 IGSF8Q969P0 613 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 OTUB2Q96DC9 234 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 TMA16Q96EY4 203 aaKnown RBP8.58□□□□□ -1.04
SF1-218ENST00000489544 BTN2A3PQ96KV6 586 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 PRMT1Q99873 361 aaKnown RBP8.58□□□□□ -1.04
SF1-218ENST00000489544 KCNF1Q9H3M0 494 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 TRPV5Q9NQA5 729 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 WNT16Q9UBV4 365 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 STOML2Q9UJZ1 356 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 VANGL2Q9ULK5 521 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 NDRG2Q9UN36 371 aaKnown RBP8.58□□□□□ -1.04
SF1-218ENST00000489544 ZNF510Q9Y2H8 683 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 MYOFQ9NZM1 2061 aa8.58□□□□□ -1.04
SF1-218ENST00000489544 TRIOO75962 3097 aa8.57□□□□□ -1.04
SF1-218ENST00000489544 TMEM221A6NGB7 291 aa8.57□□□□□ -1.04
SF1-218ENST00000489544 M0R296 226 aa8.57□□□□□ -1.04
SF1-218ENST00000489544 MYO1FO00160 1098 aa8.57□□□□□ -1.04
SF1-218ENST00000489544 STK25O00506 426 aa8.57□□□□□ -1.04
SF1-218ENST00000489544 TBL1XO60907 577 aa8.57□□□□□ -1.04
SF1-218ENST00000489544 SRGAP2O75044 1071 aa8.57□□□□□ -1.04
SF1-218ENST00000489544 TULP3O75386 442 aa8.57□□□□□ -1.04
SF1-218ENST00000489544 CNTN5O94779 1100 aa8.57□□□□□ -1.04
SF1-218ENST00000489544 LATS1O95835 1130 aa8.57□□□□□ -1.04
SF1-218ENST00000489544 ADH1CP00326 375 aa8.57□□□□□ -1.04
SF1-218ENST00000489544 PENKP01210 267 aaPredicted RBP8.57□□□□□ -1.04
SF1-218ENST00000489544 SLC2A3P11169 496 aa8.57□□□□□ -1.04
SF1-218ENST00000489544 ALADP13716 330 aa8.57□□□□□ -1.04
SF1-218ENST00000489544 TARSP26639 723 aaKnown RBP8.57□□□□□ -1.04
SF1-218ENST00000489544 HOXD9P28356 352 aaPredicted RBP8.57□□□□□ -1.04
SF1-218ENST00000489544 CHKAP35790 457 aa8.57□□□□□ -1.04
SF1-218ENST00000489544 GJC1P36383 396 aa8.57□□□□□ -1.04
SF1-218ENST00000489544 NOP2P46087 812 aaKnown RBP8.57□□□□□ -1.04
SF1-218ENST00000489544 VAV2P52735 878 aa8.57□□□□□ -1.04
SF1-218ENST00000489544 MLLT6P55198 1093 aaPredicted RBP8.57□□□□□ -1.04
SF1-218ENST00000489544 TAS2R40P59535 323 aa8.57□□□□□ -1.04
SF1-218ENST00000489544 GAD2Q05329 585 aa8.57□□□□□ -1.04
SF1-218ENST00000489544 SMTNL2Q2TAL5 461 aa8.57□□□□□ -1.04
SF1-218ENST00000489544 ATP13A4Q4VNC1 1196 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms