RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 SMARCD1Q96GM5 515 aa9.36□□□□□ -0.91
TNRC6B-208ENST00000489500 LOXL4Q96JB6 756 aa9.36□□□□□ -0.91
TNRC6B-208ENST00000489500 LRRC3BQ96PB8 259 aa9.36□□□□□ -0.91
TNRC6B-208ENST00000489500 CYP2S1Q96SQ9 504 aa9.36□□□□□ -0.91
TNRC6B-208ENST00000489500 MRPL45Q9BRJ2 306 aaKnown RBP9.36□□□□□ -0.91
TNRC6B-208ENST00000489500 RTKNQ9BST9 563 aa9.36□□□□□ -0.91
TNRC6B-208ENST00000489500 GTPBP4Q9BZE4 634 aaKnown RBP9.36□□□□□ -0.91
TNRC6B-208ENST00000489500 FBXO44Q9H4M3 255 aa9.36□□□□□ -0.91
TNRC6B-208ENST00000489500 DMAP1Q9NPF5 467 aaPredicted RBP9.36□□□□□ -0.91
TNRC6B-208ENST00000489500 CRTAC1Q9NQ79 661 aa9.36□□□□□ -0.91
TNRC6B-208ENST00000489500 HPS4Q9NQG7 708 aa9.36□□□□□ -0.91
TNRC6B-208ENST00000489500 HOOK1Q9UJC3 728 aaKnown RBP9.36□□□□□ -0.91
TNRC6B-208ENST00000489500 CCL26Q9Y258 94 aa9.36□□□□□ -0.91
TNRC6B-208ENST00000489500 EP300Q09472 2414 aaPredicted RBP9.36□□□□□ -0.91
TNRC6B-208ENST00000489500 PTPRJQ12913 1337 aa9.35□□□□□ -0.91
TNRC6B-208ENST00000489500 A0A1B0GVL5 298 aa9.35□□□□□ -0.91
TNRC6B-208ENST00000489500 SOWAHDA6NJG2 315 aa9.35□□□□□ -0.91
TNRC6B-208ENST00000489500 F8VP50 259 aa9.35□□□□□ -0.91
TNRC6B-208ENST00000489500 MAPK13O15264 365 aa9.35□□□□□ -0.91
TNRC6B-208ENST00000489500 RPP40O75818 363 aaKnown RBP9.35□□□□□ -0.91
TNRC6B-208ENST00000489500 AKAP3O75969 853 aa9.35□□□□□ -0.91
TNRC6B-208ENST00000489500 ALDH1A2O94788 518 aa9.35□□□□□ -0.91
TNRC6B-208ENST00000489500 RHOBTB1O94844 696 aa9.35□□□□□ -0.91
TNRC6B-208ENST00000489500 NR3C1P04150 777 aa9.35□□□□□ -0.91
TNRC6B-208ENST00000489500 MBL2P11226 248 aaPredicted RBP9.35□□□□□ -0.91
TNRC6B-208ENST00000489500 PFKFB1P16118 471 aa9.35□□□□□ -0.91
TNRC6B-208ENST00000489500 GJA4P35212 333 aa9.35□□□□□ -0.91
TNRC6B-208ENST00000489500 PSMC2P35998 433 aaKnown RBP9.35□□□□□ -0.91
TNRC6B-208ENST00000489500 PIK3CAP42336 1068 aa9.35□□□□□ -0.91
TNRC6B-208ENST00000489500 GALK1P51570 392 aa9.35□□□□□ -0.91
TNRC6B-208ENST00000489500 VAMP7P51809 220 aa9.35□□□□□ -0.91
TNRC6B-208ENST00000489500 SLC7A9P82251 487 aa9.35□□□□□ -0.91
TNRC6B-208ENST00000489500 ELF2Q15723 593 aa9.35□□□□□ -0.91
TNRC6B-208ENST00000489500 ZNF77Q15935 545 aa9.35□□□□□ -0.91
TNRC6B-208ENST00000489500 TRIM68Q6AZZ1 485 aa9.35□□□□□ -0.91
TNRC6B-208ENST00000489500 Q6ZS52 159 aa9.35□□□□□ -0.91
TNRC6B-208ENST00000489500 INTS8Q75QN2 995 aaKnown RBP9.35□□□□□ -0.91
TNRC6B-208ENST00000489500 PARD3BQ8TEW8 1205 aa9.35□□□□□ -0.91
TNRC6B-208ENST00000489500 RMDN1Q96DB5 314 aa9.35□□□□□ -0.91
TNRC6B-208ENST00000489500 OTUB2Q96DC9 234 aa9.35□□□□□ -0.91
TNRC6B-208ENST00000489500 FANCD2OSQ96PS1 177 aa9.35□□□□□ -0.91
TNRC6B-208ENST00000489500 TTLL2Q9BWV7 592 aa9.35□□□□□ -0.91
TNRC6B-208ENST00000489500 RMND1Q9NWS8 449 aa9.35□□□□□ -0.91
TNRC6B-208ENST00000489500 GCNT4Q9P109 453 aa9.35□□□□□ -0.91
TNRC6B-208ENST00000489500 SH3BP1Q9Y3L3 701 aa9.35□□□□□ -0.91
TNRC6B-208ENST00000489500 WNT6Q9Y6F9 365 aa9.35□□□□□ -0.91
TNRC6B-208ENST00000489500 OTOGLQ3ZCN5 2332 aa9.34□□□□□ -0.91
TNRC6B-208ENST00000489500 MYO16Q9Y6X6 1858 aa9.34□□□□□ -0.91
TNRC6B-208ENST00000489500 USP34Q70CQ2 3546 aa9.34□□□□□ -0.91
TNRC6B-208ENST00000489500 C2orf78A6NCI8 922 aa9.34□□□□□ -0.91
TNRC6B-208ENST00000489500 ZNF840PA6NDX5 716 aa9.34□□□□□ -0.91
TNRC6B-208ENST00000489500 LRRIQ3A6PVS8 624 aaPredicted RBP9.34□□□□□ -0.91
TNRC6B-208ENST00000489500 K7ESF4 209 aa9.34□□□□□ -0.91
TNRC6B-208ENST00000489500 LEFTY2O00292 366 aa9.34□□□□□ -0.91
TNRC6B-208ENST00000489500 TADA3O75528 432 aa9.34□□□□□ -0.91
TNRC6B-208ENST00000489500 APBB3O95704 486 aa9.34□□□□□ -0.91
TNRC6B-208ENST00000489500 C4BPAP04003 597 aaKnown RBP9.34□□□□□ -0.91
TNRC6B-208ENST00000489500 APODP05090 189 aa9.34□□□□□ -0.91
TNRC6B-208ENST00000489500 GSTP1P09211 210 aaKnown RBP9.34□□□□□ -0.91
TNRC6B-208ENST00000489500 TDGF1P13385 188 aa9.34□□□□□ -0.91
TNRC6B-208ENST00000489500 ARSAP15289 507 aa9.34□□□□□ -0.91
TNRC6B-208ENST00000489500 CASP1P29466 404 aa9.34□□□□□ -0.91
TNRC6B-208ENST00000489500 SLC8A3P57103 927 aa9.34□□□□□ -0.91
TNRC6B-208ENST00000489500 ENPEPQ07075 957 aa9.34□□□□□ -0.91
TNRC6B-208ENST00000489500 TAF10Q12962 218 aa9.34□□□□□ -0.91
TNRC6B-208ENST00000489500 STK4Q13043 487 aa9.34□□□□□ -0.91
TNRC6B-208ENST00000489500 CDK5R2Q13319 367 aa9.34□□□□□ -0.91
TNRC6B-208ENST00000489500 BYSLQ13895 437 aaKnown RBP9.34□□□□□ -0.91
TNRC6B-208ENST00000489500 CSRP2Q16527 193 aa9.34□□□□□ -0.91
TNRC6B-208ENST00000489500 LPAL2Q16609 132 aa9.34□□□□□ -0.91
TNRC6B-208ENST00000489500 HSF5Q4G112 596 aaPredicted RBP9.34□□□□□ -0.91
TNRC6B-208ENST00000489500 HECTD3Q5T447 861 aa9.34□□□□□ -0.91
TNRC6B-208ENST00000489500 FSTL4Q6MZW2 842 aa9.34□□□□□ -0.91
TNRC6B-208ENST00000489500 SYT13Q7L8C5 426 aa9.34□□□□□ -0.91
TNRC6B-208ENST00000489500 TADA2BQ86TJ2 420 aa9.34□□□□□ -0.91
TNRC6B-208ENST00000489500 RPLP0P6Q8NHW5 317 aa9.34□□□□□ -0.91
TNRC6B-208ENST00000489500 NETO1Q8TDF5 533 aa9.34□□□□□ -0.91
TNRC6B-208ENST00000489500 STK35Q8TDR2 534 aa9.34□□□□□ -0.91
TNRC6B-208ENST00000489500 GAB3Q8WWW8 586 aa9.34□□□□□ -0.91
TNRC6B-208ENST00000489500 TSG101Q99816 390 aa9.34□□□□□ -0.91
TNRC6B-208ENST00000489500 B3GNT5Q9BYG0 378 aa9.34□□□□□ -0.91
TNRC6B-208ENST00000489500 CYP3A43Q9HB55 503 aa9.34□□□□□ -0.91
TNRC6B-208ENST00000489500 TLR8Q9NR97 1041 aaKnown RBP9.34□□□□□ -0.91
TNRC6B-208ENST00000489500 TRAF3IP3Q9Y228 551 aa9.34□□□□□ -0.91
TNRC6B-208ENST00000489500 MYOFQ9NZM1 2061 aa9.33□□□□□ -0.92
TNRC6B-208ENST00000489500 GVINP1Q7Z2Y8 2422 aa9.33□□□□□ -0.92
TNRC6B-208ENST00000489500 A0A1W2PQ27 194 aa9.33□□□□□ -0.92
TNRC6B-208ENST00000489500 A0A1W2PQ64 194 aa9.33□□□□□ -0.92
TNRC6B-208ENST00000489500 A0A1W2PQD8 194 aa9.33□□□□□ -0.92
TNRC6B-208ENST00000489500 E2F8A0AVK6 867 aa9.33□□□□□ -0.92
TNRC6B-208ENST00000489500 HCRTO43612 131 aa9.33□□□□□ -0.92
TNRC6B-208ENST00000489500 KLRC4O43908 158 aa9.33□□□□□ -0.92
TNRC6B-208ENST00000489500 RHOBTB3O94955 611 aa9.33□□□□□ -0.92
TNRC6B-208ENST00000489500 EGFP01133 1207 aa9.33□□□□□ -0.92
TNRC6B-208ENST00000489500 FAM200BP0CF97 657 aa9.33□□□□□ -0.92
TNRC6B-208ENST00000489500 NR2F2P24468 414 aa9.33□□□□□ -0.92
TNRC6B-208ENST00000489500 EIF2DP41214 584 aaKnown RBP9.33□□□□□ -0.92
TNRC6B-208ENST00000489500 TUBP50607 506 aa9.33□□□□□ -0.92
TNRC6B-208ENST00000489500 MRPS21P82921 87 aaKnown RBP9.33□□□□□ -0.92
TNRC6B-208ENST00000489500 ID3Q02535 119 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms