RNA–Protein interactions for RNA: ENST00000489160.1

CCL20-204, Transcript of C-C motif chemokine ligand 20, humanhuman

TSL 3

Gene CCL20, Length 673 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-204ENST00000489160 VPS4AQ9UN37 437 aa5.61□□□□□ -1.51
CCL20-204ENST00000489160 TBC1D3DA0A087WVF3 549 aa5.6□□□□□ -1.51
CCL20-204ENST00000489160 TBC1D3IA0A087WXS9 549 aa5.6□□□□□ -1.51
CCL20-204ENST00000489160 TBC1D3EA0A087X179 549 aa5.6□□□□□ -1.51
CCL20-204ENST00000489160 TBC1D3KA0A087X1G2 549 aa5.6□□□□□ -1.51
CCL20-204ENST00000489160 TBC1D3BA6NDS4 549 aa5.6□□□□□ -1.51
CCL20-204ENST00000489160 TBC1D3FA6NER0 549 aaPredicted RBP5.6□□□□□ -1.51
CCL20-204ENST00000489160 TBC1D3LB9A6J9 549 aa5.6□□□□□ -1.51
CCL20-204ENST00000489160 H3BNC9 293 aa5.6□□□□□ -1.51
CCL20-204ENST00000489160 NCAM2O15394 837 aa5.6□□□□□ -1.51
CCL20-204ENST00000489160 KRT38O76015 456 aa5.6□□□□□ -1.51
CCL20-204ENST00000489160 CYP3A4P08684 503 aa5.6□□□□□ -1.51
CCL20-204ENST00000489160 TBC1D3HP0C7X1 549 aa5.6□□□□□ -1.51
CCL20-204ENST00000489160 GPD1P21695 349 aa5.6□□□□□ -1.51
CCL20-204ENST00000489160 GRK5P34947 590 aa5.6□□□□□ -1.51
CCL20-204ENST00000489160 CASP2P42575 452 aa5.6□□□□□ -1.51
CCL20-204ENST00000489160 TBC1D3GQ6DHY5 549 aa5.6□□□□□ -1.51
CCL20-204ENST00000489160 TBC1D3CQ6IPX1 549 aa5.6□□□□□ -1.51
CCL20-204ENST00000489160 WDR93Q6P2C0 686 aa5.6□□□□□ -1.51
CCL20-204ENST00000489160 PCSK4Q6UW60 755 aa5.6□□□□□ -1.51
CCL20-204ENST00000489160 ANKS1BQ7Z6G8 1248 aa5.6□□□□□ -1.51
CCL20-204ENST00000489160 TBC1D3Q8IZP1 549 aaPredicted RBP5.6□□□□□ -1.51
CCL20-204ENST00000489160 TMEM57Q8N5G2 664 aa5.6□□□□□ -1.51
CCL20-204ENST00000489160 PDILTQ8N807 584 aa5.6□□□□□ -1.51
CCL20-204ENST00000489160 USP13Q92995 863 aaPredicted RBP5.6□□□□□ -1.51
CCL20-204ENST00000489160 SARAFQ96BY9 339 aa5.6□□□□□ -1.51
CCL20-204ENST00000489160 KAZALD1Q96I82 304 aa5.6□□□□□ -1.51
CCL20-204ENST00000489160 TBATAQ96M53 351 aa5.6□□□□□ -1.51
CCL20-204ENST00000489160 ABHD16BQ9H3Z7 469 aa5.6□□□□□ -1.51
CCL20-204ENST00000489160 RASSF1Q9NS23 344 aa5.6□□□□□ -1.51
CCL20-204ENST00000489160 ASIC5Q9NY37 505 aa5.6□□□□□ -1.51
CCL20-204ENST00000489160 KCND3Q9UK17 655 aa5.6□□□□□ -1.51
CCL20-204ENST00000489160 ADAM21Q9UKJ8 722 aa5.6□□□□□ -1.51
CCL20-204ENST00000489160 RAB21Q9UL25 225 aa5.6□□□□□ -1.51
CCL20-204ENST00000489160 TRPC5Q9UL62 973 aaPredicted RBP5.6□□□□□ -1.51
CCL20-204ENST00000489160 DMRT1Q9Y5R6 373 aa5.6□□□□□ -1.51
CCL20-204ENST00000489160 SPATA31A1Q5TZJ5 1347 aa5.59□□□□□ -1.51
CCL20-204ENST00000489160 FAM90A20PA6NIJ5 464 aa5.59□□□□□ -1.51
CCL20-204ENST00000489160 C3orf70A6NLC5 250 aaPredicted RBP5.59□□□□□ -1.51
CCL20-204ENST00000489160 TTC34A8MYJ7 566 aa5.59□□□□□ -1.51
CCL20-204ENST00000489160 TARM1B6A8C7 271 aa5.59□□□□□ -1.51
CCL20-204ENST00000489160 BTBD19C9JJ37 291 aa5.59□□□□□ -1.51
CCL20-204ENST00000489160 CLIC1O00299 241 aa5.59□□□□□ -1.51
CCL20-204ENST00000489160 FYB1O15117 783 aa5.59□□□□□ -1.51
CCL20-204ENST00000489160 ALDOAP04075 364 aaKnown RBP5.59□□□□□ -1.51
CCL20-204ENST00000489160 SLC3A2P08195 630 aaKnown RBP5.59□□□□□ -1.51
CCL20-204ENST00000489160 RBM5P52756 815 aaKnown RBP eCLIP5.59□□□□□ -1.51
CCL20-204ENST00000489160 FAM3BP58499 235 aaPredicted RBP5.59□□□□□ -1.51
CCL20-204ENST00000489160 WDR5P61964 334 aaKnown RBP5.59□□□□□ -1.51
CCL20-204ENST00000489160 RNASELQ05823 741 aaKnown RBP5.59□□□□□ -1.51
CCL20-204ENST00000489160 KCNB1Q14721 858 aa5.59□□□□□ -1.51
CCL20-204ENST00000489160 MFSD13AQ14CX5 517 aa5.59□□□□□ -1.51
CCL20-204ENST00000489160 LARS2Q15031 903 aaKnown RBP5.59□□□□□ -1.51
CCL20-204ENST00000489160 FAM110CQ1W6H9 321 aa5.59□□□□□ -1.51
CCL20-204ENST00000489160 TMEM65Q6PI78 240 aa5.59□□□□□ -1.51
CCL20-204ENST00000489160 DCDC5Q6ZRR9 648 aa5.59□□□□□ -1.51
CCL20-204ENST00000489160 SYT13Q7L8C5 426 aa5.59□□□□□ -1.51
CCL20-204ENST00000489160 TMTC2Q8N394 836 aa5.59□□□□□ -1.51
CCL20-204ENST00000489160 GPR150Q8NGU9 434 aa5.59□□□□□ -1.51
CCL20-204ENST00000489160 SLC2A12Q8TD20 617 aa5.59□□□□□ -1.51
CCL20-204ENST00000489160 ADAMTS18Q8TE60 1221 aa5.59□□□□□ -1.51
CCL20-204ENST00000489160 AKAP1Q92667 903 aaKnown RBP eCLIP5.59□□□□□ -1.51
CCL20-204ENST00000489160 REPS1Q96D71 796 aa5.59□□□□□ -1.51
CCL20-204ENST00000489160 TRMT61AQ96FX7 289 aaKnown RBP5.59□□□□□ -1.51
CCL20-204ENST00000489160 HIC2Q96JB3 615 aa5.59□□□□□ -1.51
CCL20-204ENST00000489160 CCDC17Q96LX7 622 aa5.59□□□□□ -1.51
CCL20-204ENST00000489160 ELOVL1Q9BW60 279 aa5.59□□□□□ -1.51
CCL20-204ENST00000489160 KLK15Q9H2R5 256 aa5.59□□□□□ -1.51
CCL20-204ENST00000489160 IKZF4Q9H2S9 585 aa5.59□□□□□ -1.51
CCL20-204ENST00000489160 CHODLQ9H9P2 273 aa5.59□□□□□ -1.51
CCL20-204ENST00000489160 RIC8AQ9NPQ8 531 aa5.59□□□□□ -1.51
CCL20-204ENST00000489160 ASB6Q9NWX5 421 aa5.59□□□□□ -1.51
CCL20-204ENST00000489160 SH3BP4Q9P0V3 963 aa5.59□□□□□ -1.51
CCL20-204ENST00000489160 SEMA5BQ9P283 1151 aa5.59□□□□□ -1.51
CCL20-204ENST00000489160 GJD2Q9UKL4 321 aa5.59□□□□□ -1.51
CCL20-204ENST00000489160 SLC12A4Q9UP95 1085 aa5.59□□□□□ -1.51
CCL20-204ENST00000489160 INSL6Q9Y581 213 aa5.59□□□□□ -1.51
CCL20-204ENST00000489160 WNT6Q9Y6F9 365 aa5.59□□□□□ -1.51
CCL20-204ENST00000489160 TCRBV5S1A1TA0A578 114 aa5.58□□□□□ -1.52
CCL20-204ENST00000489160 SEPT4O43236 478 aa5.58□□□□□ -1.52
CCL20-204ENST00000489160 HNRNPRO43390 633 aaKnown RBP5.58□□□□□ -1.52
CCL20-204ENST00000489160 GCATO75600 419 aa5.58□□□□□ -1.52
CCL20-204ENST00000489160 CKMT1AP12532 417 aa5.58□□□□□ -1.52
CCL20-204ENST00000489160 RXRAP19793 462 aa5.58□□□□□ -1.52
CCL20-204ENST00000489160 SLC8A1P32418 973 aa5.58□□□□□ -1.52
CCL20-204ENST00000489160 FOXL2P58012 376 aa5.58□□□□□ -1.52
CCL20-204ENST00000489160 TAS2R50P59544 299 aa5.58□□□□□ -1.52
CCL20-204ENST00000489160 DCTN1Q14203 1278 aa5.58□□□□□ -1.52
CCL20-204ENST00000489160 CNGA3Q16281 694 aa5.58□□□□□ -1.52
CCL20-204ENST00000489160 VSTM1Q6UX27 236 aa5.58□□□□□ -1.52
CCL20-204ENST00000489160 SERPINA13PQ6UXR4 307 aa5.58□□□□□ -1.52
CCL20-204ENST00000489160 KYAT3Q6YP21 454 aaKnown RBP5.58□□□□□ -1.52
CCL20-204ENST00000489160 RASGRP2Q7LDG7 609 aa5.58□□□□□ -1.52
CCL20-204ENST00000489160 AMIGO2Q86SJ2 522 aa5.58□□□□□ -1.52
CCL20-204ENST00000489160 LRRTM4Q86VH4 590 aa5.58□□□□□ -1.52
CCL20-204ENST00000489160 LAS2Q8IYD9 372 aa5.58□□□□□ -1.52
CCL20-204ENST00000489160 SRFBP1Q8NEF9 429 aaKnown RBP5.58□□□□□ -1.52
CCL20-204ENST00000489160 PPHLN1Q8NEY8 458 aaKnown RBP5.58□□□□□ -1.52
CCL20-204ENST00000489160 MPP4Q96JB8 637 aa5.58□□□□□ -1.52
CCL20-204ENST00000489160 COG8Q96MW5 612 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms