RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 ERVK-5Q9HDB9 667 aa4.98□□□□□ -1.61
ITGB1-214ENST00000488427 GJB4Q9NTQ9 266 aa4.98□□□□□ -1.61
ITGB1-214ENST00000488427 ASIC5Q9NY37 505 aa4.98□□□□□ -1.61
ITGB1-214ENST00000488427 LPAR3Q9UBY5 353 aa4.98□□□□□ -1.61
ITGB1-214ENST00000488427 DTNAQ9Y4J8 743 aa4.98□□□□□ -1.61
ITGB1-214ENST00000488427 PCDHB7Q9Y5E2 793 aa4.98□□□□□ -1.61
ITGB1-214ENST00000488427 SIRT4Q9Y6E7 314 aaPredicted RBP4.98□□□□□ -1.61
ITGB1-214ENST00000488427 A2ML1A8K2U0 1454 aa4.98□□□□□ -1.61
ITGB1-214ENST00000488427 LRRC9Q6ZRR7 1453 aa4.98□□□□□ -1.61
ITGB1-214ENST00000488427 AFF2P51816 1311 aa4.97□□□□□ -1.61
ITGB1-214ENST00000488427 WDR17Q8IZU2 1322 aa4.97□□□□□ -1.61
ITGB1-214ENST00000488427 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.97□□□□□ -1.61
ITGB1-214ENST00000488427 KIF14Q15058 1648 aa4.97□□□□□ -1.61
ITGB1-214ENST00000488427 BCL9LQ86UU0 1499 aa4.97□□□□□ -1.61
ITGB1-214ENST00000488427 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.97□□□□□ -1.61
ITGB1-214ENST00000488427 TCRBV5S1A1TA0A578 114 aa4.97□□□□□ -1.61
ITGB1-214ENST00000488427 FYB1O15117 783 aa4.97□□□□□ -1.61
ITGB1-214ENST00000488427 NTSR2O95665 410 aa4.97□□□□□ -1.61
ITGB1-214ENST00000488427 CELA2AP08217 269 aa4.97□□□□□ -1.61
ITGB1-214ENST00000488427 NPPBP16860 134 aa4.97□□□□□ -1.61
ITGB1-214ENST00000488427 KELP23276 732 aa4.97□□□□□ -1.61
ITGB1-214ENST00000488427 SLC8A1P32418 973 aa4.97□□□□□ -1.61
ITGB1-214ENST00000488427 GALNSP34059 522 aa4.97□□□□□ -1.61
ITGB1-214ENST00000488427 ATPAF1Q5TC12 328 aaPredicted RBP4.97□□□□□ -1.61
ITGB1-214ENST00000488427 MORN5Q5VZ52 161 aa4.97□□□□□ -1.61
ITGB1-214ENST00000488427 FAM90A2PQ658T7 463 aa4.97□□□□□ -1.61
ITGB1-214ENST00000488427 ZNF782Q6ZMW2 699 aaPredicted RBP4.97□□□□□ -1.61
ITGB1-214ENST00000488427 PRSS3P2Q8NHM4 247 aa4.97□□□□□ -1.61
ITGB1-214ENST00000488427 C5orf34Q96MH7 638 aa4.97□□□□□ -1.61
ITGB1-214ENST00000488427 MPHOSPH6Q99547 160 aaKnown RBP4.97□□□□□ -1.61
ITGB1-214ENST00000488427 NUAK2Q9H093 628 aa4.97□□□□□ -1.61
ITGB1-214ENST00000488427 PLCB1Q9NQ66 1216 aa4.97□□□□□ -1.61
ITGB1-214ENST00000488427 SLC52A1Q9NWF4 448 aa4.97□□□□□ -1.61
ITGB1-214ENST00000488427 COMMD10Q9Y6G5 202 aa4.97□□□□□ -1.61
ITGB1-214ENST00000488427 ABCA6Q8N139 1617 aa4.97□□□□□ -1.61
ITGB1-214ENST00000488427 NPHP4O75161 1426 aaPredicted RBP4.97□□□□□ -1.61
ITGB1-214ENST00000488427 FGD6Q6ZV73 1430 aa4.97□□□□□ -1.61
ITGB1-214ENST00000488427 ZNF804BA4D1E1 1349 aa4.97□□□□□ -1.61
ITGB1-214ENST00000488427 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.96□□□□□ -1.62
ITGB1-214ENST00000488427 J3KTA2 159 aa4.96□□□□□ -1.62
ITGB1-214ENST00000488427 CA12O43570 354 aa4.96□□□□□ -1.62
ITGB1-214ENST00000488427 CBFA2T3O75081 653 aa4.96□□□□□ -1.62
ITGB1-214ENST00000488427 LATS1O95835 1130 aa4.96□□□□□ -1.62
ITGB1-214ENST00000488427 DEUP1Q05D60 604 aa4.96□□□□□ -1.62
ITGB1-214ENST00000488427 ZNF569Q5MCW4 686 aa4.96□□□□□ -1.62
ITGB1-214ENST00000488427 TMTC4Q5T4D3 741 aa4.96□□□□□ -1.62
ITGB1-214ENST00000488427 XRRA1Q6P2D8 792 aa4.96□□□□□ -1.62
ITGB1-214ENST00000488427 CNGA4Q8IV77 575 aa4.96□□□□□ -1.62
ITGB1-214ENST00000488427 ENAHQ8N8S7 591 aaPredicted RBP4.96□□□□□ -1.62
ITGB1-214ENST00000488427 SRFBP1Q8NEF9 429 aaKnown RBP4.96□□□□□ -1.62
ITGB1-214ENST00000488427 ZNF398Q8TD17 642 aa4.96□□□□□ -1.62
ITGB1-214ENST00000488427 PIGOQ8TEQ8 1089 aa4.96□□□□□ -1.62
ITGB1-214ENST00000488427 GLMPQ8WWB7 406 aa4.96□□□□□ -1.62
ITGB1-214ENST00000488427 DPF1Q92782 380 aa4.96□□□□□ -1.62
ITGB1-214ENST00000488427 NAF1Q96HR8 494 aaKnown RBP4.96□□□□□ -1.62
ITGB1-214ENST00000488427 EFHD1Q9BUP0 239 aa4.96□□□□□ -1.62
ITGB1-214ENST00000488427 VPS45Q9NRW7 570 aa4.96□□□□□ -1.62
ITGB1-214ENST00000488427 ABHD10Q9NUJ1 306 aa4.96□□□□□ -1.62
ITGB1-214ENST00000488427 ATP10BO94823 1461 aa4.95□□□□□ -1.62
ITGB1-214ENST00000488427 CYP2D7A0A087X1C5 515 aa4.95□□□□□ -1.62
ITGB1-214ENST00000488427 ABHD14A-ACY1A0A1B0GW23 586 aa4.95□□□□□ -1.62
ITGB1-214ENST00000488427 WIPF3A6NGB9 483 aa4.95□□□□□ -1.62
ITGB1-214ENST00000488427 EFCAB8A8MWE9 144 aa4.95□□□□□ -1.62
ITGB1-214ENST00000488427 NPC1O15118 1278 aa4.95□□□□□ -1.62
ITGB1-214ENST00000488427 ITGA2BP08514 1039 aa4.95□□□□□ -1.62
ITGB1-214ENST00000488427 MMP13P45452 471 aa4.95□□□□□ -1.62
ITGB1-214ENST00000488427 ABCG1P45844 678 aa4.95□□□□□ -1.62
ITGB1-214ENST00000488427 SLC12A2P55011 1212 aa4.95□□□□□ -1.62
ITGB1-214ENST00000488427 PDCD2Q16342 344 aaPredicted RBP4.95□□□□□ -1.62
ITGB1-214ENST00000488427 GRHL2Q6ISB3 625 aa4.95□□□□□ -1.62
ITGB1-214ENST00000488427 SLC18B1Q6NT16 456 aa4.95□□□□□ -1.62
ITGB1-214ENST00000488427 WDR93Q6P2C0 686 aa4.95□□□□□ -1.62
ITGB1-214ENST00000488427 ACSM6Q6P461 480 aa4.95□□□□□ -1.62
ITGB1-214ENST00000488427 YTHDF3Q7Z739 585 aaKnown RBP4.95□□□□□ -1.62
ITGB1-214ENST00000488427 FAM71BQ8TC56 605 aa4.95□□□□□ -1.62
ITGB1-214ENST00000488427 BCAS4Q8TDM0 211 aa4.95□□□□□ -1.62
ITGB1-214ENST00000488427 NTN5Q8WTR8 489 aaPredicted RBP4.95□□□□□ -1.62
ITGB1-214ENST00000488427 AKAP1Q92667 903 aaKnown RBP eCLIP4.95□□□□□ -1.62
ITGB1-214ENST00000488427 KAT2BQ92831 832 aa4.95□□□□□ -1.62
ITGB1-214ENST00000488427 PAAF1Q9BRP4 392 aa4.95□□□□□ -1.62
ITGB1-214ENST00000488427 TP63Q9H3D4 680 aaPredicted RBP4.95□□□□□ -1.62
ITGB1-214ENST00000488427 IPO11Q9UI26 975 aaKnown RBP4.95□□□□□ -1.62
ITGB1-214ENST00000488427 ASAP1Q9ULH1 1129 aa4.95□□□□□ -1.62
ITGB1-214ENST00000488427 HEMK1Q9Y5R4 338 aaPredicted RBP4.95□□□□□ -1.62
ITGB1-214ENST00000488427 SCAPERQ9BY12 1400 aa4.95□□□□□ -1.62
ITGB1-214ENST00000488427 ZC3H13Q5T200 1668 aaKnown RBP4.95□□□□□ -1.62
ITGB1-214ENST00000488427 MED14O60244 1454 aa4.94□□□□□ -1.62
ITGB1-214ENST00000488427 KDM5DQ9BY66 1539 aa4.94□□□□□ -1.62
ITGB1-214ENST00000488427 CTTNBP2Q8WZ74 1663 aa4.94□□□□□ -1.62
ITGB1-214ENST00000488427 A0A087WV62 115 aa4.94□□□□□ -1.62
ITGB1-214ENST00000488427 C3orf70A6NLC5 250 aaPredicted RBP4.94□□□□□ -1.62
ITGB1-214ENST00000488427 PIP5K1BO14986 540 aa4.94□□□□□ -1.62
ITGB1-214ENST00000488427 INPPL1O15357 1258 aa4.94□□□□□ -1.62
ITGB1-214ENST00000488427 CTIFO43310 598 aaKnown RBP4.94□□□□□ -1.62
ITGB1-214ENST00000488427 PRAMEF2O60811 474 aa4.94□□□□□ -1.62
ITGB1-214ENST00000488427 LARGE1O95461 756 aa4.94□□□□□ -1.62
ITGB1-214ENST00000488427 PRR35P0CG20 571 aa4.94□□□□□ -1.62
ITGB1-214ENST00000488427 RPS13P62277 151 aaKnown RBP4.94□□□□□ -1.62
ITGB1-214ENST00000488427 RAE1P78406 368 aaKnown RBP4.94□□□□□ -1.62
ITGB1-214ENST00000488427 BIRC2Q13490 618 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms