RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 TYRP14679 529 aa11.45□□□□□ -0.58
UBE4B-210ENST00000488228 TACR2P21452 398 aa11.45□□□□□ -0.58
UBE4B-210ENST00000488228 TARSP26639 723 aaKnown RBP11.45□□□□□ -0.58
UBE4B-210ENST00000488228 HOXD9P28356 352 aaPredicted RBP11.45□□□□□ -0.58
UBE4B-210ENST00000488228 CYLC1P35663 651 aaPredicted RBP11.45□□□□□ -0.58
UBE4B-210ENST00000488228 SLC6A11P48066 632 aa11.45□□□□□ -0.58
UBE4B-210ENST00000488228 IRAK1P51617 712 aa11.45□□□□□ -0.58
UBE4B-210ENST00000488228 GSDMDP57764 484 aa11.45□□□□□ -0.58
UBE4B-210ENST00000488228 STARD6P59095 220 aa11.45□□□□□ -0.58
UBE4B-210ENST00000488228 NR1H3Q13133 447 aa11.45□□□□□ -0.58
UBE4B-210ENST00000488228 UBXN2BQ14CS0 331 aa11.45□□□□□ -0.58
UBE4B-210ENST00000488228 MS4A13Q5J8X5 152 aa11.45□□□□□ -0.58
UBE4B-210ENST00000488228 FYB2Q5VWT5 728 aa11.45□□□□□ -0.58
UBE4B-210ENST00000488228 STRADAQ7RTN6 431 aa11.45□□□□□ -0.58
UBE4B-210ENST00000488228 CIR1Q86X95 450 aaPredicted RBP11.45□□□□□ -0.58
UBE4B-210ENST00000488228 TMTC1Q8IUR5 882 aa11.45□□□□□ -0.58
UBE4B-210ENST00000488228 SFTPA1Q8IWL2 248 aa11.45□□□□□ -0.58
UBE4B-210ENST00000488228 LGI2Q8N0V4 545 aa11.45□□□□□ -0.58
UBE4B-210ENST00000488228 ATP6V0D2Q8N8Y2 350 aa11.45□□□□□ -0.58
UBE4B-210ENST00000488228 ACRBPQ8NEB7 543 aa11.45□□□□□ -0.58
UBE4B-210ENST00000488228 ZNF564Q8TBZ8 553 aaPredicted RBP11.45□□□□□ -0.58
UBE4B-210ENST00000488228 FAM3CQ92520 227 aa11.45□□□□□ -0.58
UBE4B-210ENST00000488228 CENPIQ92674 756 aaPredicted RBP11.45□□□□□ -0.58
UBE4B-210ENST00000488228 DESI2Q9BSY9 194 aa11.45□□□□□ -0.58
UBE4B-210ENST00000488228 TKTL2Q9H0I9 626 aa11.45□□□□□ -0.58
UBE4B-210ENST00000488228 MRPL47Q9HD33 250 aaKnown RBP11.45□□□□□ -0.58
UBE4B-210ENST00000488228 LTB4R2Q9NPC1 389 aa11.45□□□□□ -0.58
UBE4B-210ENST00000488228 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.45□□□□□ -0.58
UBE4B-210ENST00000488228 ARHGEF38Q9NXL2 777 aa11.45□□□□□ -0.58
UBE4B-210ENST00000488228 MARK1Q9P0L2 795 aa11.45□□□□□ -0.58
UBE4B-210ENST00000488228 CTTNBP2NLQ9P2B4 639 aa11.45□□□□□ -0.58
UBE4B-210ENST00000488228 REXO2Q9Y3B8 237 aaKnown RBP11.45□□□□□ -0.58
UBE4B-210ENST00000488228 MTF2Q9Y483 593 aaPredicted RBP11.45□□□□□ -0.58
UBE4B-210ENST00000488228 HS3ST4Q9Y661 456 aa11.45□□□□□ -0.58
UBE4B-210ENST00000488228 KANSL1LA0AUZ9 987 aa11.44□□□□□ -0.58
UBE4B-210ENST00000488228 CACNG3O60359 315 aa11.44□□□□□ -0.58
UBE4B-210ENST00000488228 TULP3O75386 442 aa11.44□□□□□ -0.58
UBE4B-210ENST00000488228 ENDOD1O94919 500 aa11.44□□□□□ -0.58
UBE4B-210ENST00000488228 LCA5LO95447 670 aa11.44□□□□□ -0.58
UBE4B-210ENST00000488228 F9P00740 461 aa11.44□□□□□ -0.58
UBE4B-210ENST00000488228 PENKP01210 267 aaPredicted RBP11.44□□□□□ -0.58
UBE4B-210ENST00000488228 TCF4P15884 667 aa11.44□□□□□ -0.58
UBE4B-210ENST00000488228 CHKAP35790 457 aa11.44□□□□□ -0.58
UBE4B-210ENST00000488228 RPS24P62847 133 aaKnown RBP11.44□□□□□ -0.58
UBE4B-210ENST00000488228 GAD2Q05329 585 aa11.44□□□□□ -0.58
UBE4B-210ENST00000488228 GSE1Q14687 1217 aa11.44□□□□□ -0.58
UBE4B-210ENST00000488228 BRMS1LQ5PSV4 323 aa11.44□□□□□ -0.58
UBE4B-210ENST00000488228 FSTL4Q6MZW2 842 aa11.44□□□□□ -0.58
UBE4B-210ENST00000488228 ZNF852Q6ZMS4 543 aa11.44□□□□□ -0.58
UBE4B-210ENST00000488228 CPNE8Q86YQ8 564 aa11.44□□□□□ -0.58
UBE4B-210ENST00000488228 ETFBKMTQ8IXQ9 262 aa11.44□□□□□ -0.58
UBE4B-210ENST00000488228 CCDC105Q8IYK2 499 aa11.44□□□□□ -0.58
UBE4B-210ENST00000488228 CCDC170Q8IYT3 715 aa11.44□□□□□ -0.58
UBE4B-210ENST00000488228 CFAP52Q8N1V2 620 aa11.44□□□□□ -0.58
UBE4B-210ENST00000488228 HJURPQ8NCD3 748 aaPredicted RBP11.44□□□□□ -0.58
UBE4B-210ENST00000488228 PJA1Q8NG27 643 aa11.44□□□□□ -0.58
UBE4B-210ENST00000488228 WFDC5Q8TCV5 224 aa11.44□□□□□ -0.58
UBE4B-210ENST00000488228 DDI1Q8WTU0 396 aa11.44□□□□□ -0.58
UBE4B-210ENST00000488228 EZH1Q92800 747 aaPredicted RBP11.44□□□□□ -0.58
UBE4B-210ENST00000488228 CD101Q93033 1021 aa11.44□□□□□ -0.58
UBE4B-210ENST00000488228 AZIN2Q96A70 460 aa11.44□□□□□ -0.58
UBE4B-210ENST00000488228 MSANTD3Q96H12 275 aa11.44□□□□□ -0.58
UBE4B-210ENST00000488228 SHDQ96IW2 340 aa11.44□□□□□ -0.58
UBE4B-210ENST00000488228 PEBP4Q96S96 227 aa11.44□□□□□ -0.58
UBE4B-210ENST00000488228 PRMT1Q99873 361 aaKnown RBP11.44□□□□□ -0.58
UBE4B-210ENST00000488228 P2RY13Q9BPV8 354 aa11.44□□□□□ -0.58
UBE4B-210ENST00000488228 SIK2Q9H0K1 926 aa11.44□□□□□ -0.58
UBE4B-210ENST00000488228 WDCPQ9H6R7 721 aa11.44□□□□□ -0.58
UBE4B-210ENST00000488228 FBRSL1Q9HCM7 1045 aaKnown RBP11.44□□□□□ -0.58
UBE4B-210ENST00000488228 OSGEPQ9NPF4 335 aa11.44□□□□□ -0.58
UBE4B-210ENST00000488228 RBM12Q9NTZ6 932 aaKnown RBP11.44□□□□□ -0.58
UBE4B-210ENST00000488228 DNAJC17Q9NVM6 304 aaKnown RBP11.44□□□□□ -0.58
UBE4B-210ENST00000488228 GPATCH2LQ9NWQ4 482 aa11.44□□□□□ -0.58
UBE4B-210ENST00000488228 STIM2Q9P246 746 aa11.44□□□□□ -0.58
UBE4B-210ENST00000488228 VANGL2Q9ULK5 521 aa11.44□□□□□ -0.58
UBE4B-210ENST00000488228 CLEC4EQ9ULY5 219 aa11.44□□□□□ -0.58
UBE4B-210ENST00000488228 PAXBP1Q9Y5B6 917 aa11.44□□□□□ -0.58
UBE4B-210ENST00000488228 EPN1Q9Y6I3 576 aaPredicted RBP11.44□□□□□ -0.58
UBE4B-210ENST00000488228 ANTXRLA6NF34 631 aa11.43□□□□□ -0.58
UBE4B-210ENST00000488228 TMEM110-MUSTN1A8MSY1 372 aa11.43□□□□□ -0.58
UBE4B-210ENST00000488228 EIF3CLB5ME19 914 aaKnown RBP11.43□□□□□ -0.58
UBE4B-210ENST00000488228 F5H5T6 163 aa11.43□□□□□ -0.58
UBE4B-210ENST00000488228 STK25O00506 426 aa11.43□□□□□ -0.58
UBE4B-210ENST00000488228 MAN2B1O00754 1011 aa11.43□□□□□ -0.58
UBE4B-210ENST00000488228 TBL1XO60907 577 aa11.43□□□□□ -0.58
UBE4B-210ENST00000488228 LRCH4O75427 683 aa11.43□□□□□ -0.58
UBE4B-210ENST00000488228 EGFP01133 1207 aa11.43□□□□□ -0.58
UBE4B-210ENST00000488228 CYBBP04839 570 aa11.43□□□□□ -0.58
UBE4B-210ENST00000488228 GLULP15104 373 aa11.43□□□□□ -0.58
UBE4B-210ENST00000488228 MAGEA1P43355 309 aa11.43□□□□□ -0.58
UBE4B-210ENST00000488228 MLLT6P55198 1093 aaPredicted RBP11.43□□□□□ -0.58
UBE4B-210ENST00000488228 AUHQ13825 339 aaKnown RBP11.43□□□□□ -0.58
UBE4B-210ENST00000488228 SPA17Q15506 151 aa11.43□□□□□ -0.58
UBE4B-210ENST00000488228 MPPE1Q53F39 396 aa11.43□□□□□ -0.58
UBE4B-210ENST00000488228 GRAMD4Q6IC98 578 aa11.43□□□□□ -0.58
UBE4B-210ENST00000488228 SCYL2Q6P3W7 929 aa11.43□□□□□ -0.58
UBE4B-210ENST00000488228 Q6ZS52 159 aa11.43□□□□□ -0.58
UBE4B-210ENST00000488228 C14orf80Q86SX3 495 aa11.43□□□□□ -0.58
UBE4B-210ENST00000488228 ZNF687Q8N1G0 1237 aa11.43□□□□□ -0.58
UBE4B-210ENST00000488228 PHTF2Q8N3S3 785 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms