RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 AWAT2Q6E213 333 aa3.29□□□□□ -1.88
R3HDM1-219ENST00000488035 RASGRP2Q7LDG7 609 aa3.29□□□□□ -1.88
R3HDM1-219ENST00000488035 KRT27Q7Z3Y8 459 aa3.29□□□□□ -1.88
R3HDM1-219ENST00000488035 NEK8Q86SG6 692 aa3.29□□□□□ -1.88
R3HDM1-219ENST00000488035 TRABD2AQ86V40 505 aa3.29□□□□□ -1.88
R3HDM1-219ENST00000488035 NRSN1Q8IZ57 195 aa3.29□□□□□ -1.88
R3HDM1-219ENST00000488035 PNPLA1Q8N8W4 532 aa3.29□□□□□ -1.88
R3HDM1-219ENST00000488035 TERB1Q8NA31 727 aa3.29□□□□□ -1.88
R3HDM1-219ENST00000488035 MAFAQ8NHW3 353 aaPredicted RBP3.29□□□□□ -1.88
R3HDM1-219ENST00000488035 HMCESQ96FZ2 354 aa3.29□□□□□ -1.88
R3HDM1-219ENST00000488035 LTV1Q96GA3 475 aaPredicted RBP3.29□□□□□ -1.88
R3HDM1-219ENST00000488035 SCLT1Q96NL6 688 aa3.29□□□□□ -1.88
R3HDM1-219ENST00000488035 PAAF1Q9BRP4 392 aa3.29□□□□□ -1.88
R3HDM1-219ENST00000488035 PAGR1Q9BTK6 254 aa3.29□□□□□ -1.88
R3HDM1-219ENST00000488035 ISCA1Q9BUE6 129 aa3.29□□□□□ -1.88
R3HDM1-219ENST00000488035 ARHGAP39Q9C0H5 1083 aa3.29□□□□□ -1.88
R3HDM1-219ENST00000488035 VPS33BQ9H267 617 aa3.29□□□□□ -1.88
R3HDM1-219ENST00000488035 USP29Q9HBJ7 922 aa3.29□□□□□ -1.88
R3HDM1-219ENST00000488035 TCRBV5S1A1TA0A578 114 aa3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 CCDC189A1A4V9 331 aa3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 SLC38A8A6NNN8 435 aa3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 C16orf96A6NNT2 1141 aa3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 H0Y3Z8 333 aa3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 PPEF2O14830 753 aa3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 FYB1O15117 783 aa3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 FAM155BO75949 473 aa3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 HEXIM1O94992 359 aaKnown RBP3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 KAT7O95251 611 aa3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 CYP2D6P10635 497 aa3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 CST5P28325 142 aaPredicted RBP3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 THBS4P35443 961 aa3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 IGHMBP2P38935 993 aaKnown RBP3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 TXNL4AP83876 142 aaKnown RBP3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 SF3A3Q12874 501 aaKnown RBP eCLIP3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 FAM187BQ17R55 369 aa3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 AAK1Q2M2I8 961 aa3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 ANKRD40Q6AI12 368 aa3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 NFRKBQ6P4R8 1299 aa3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 SLC29A4Q7RTT9 530 aa3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 CCDC117Q8IWD4 279 aaPredicted RBP3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 SFTPA1Q8IWL2 248 aa3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 SAMD14Q8IZD0 417 aaPredicted RBP3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 HMGB4Q8WW32 186 aa3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 TBC1D5Q92609 795 aa3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 TRMT61AQ96FX7 289 aaKnown RBP3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 VPS50Q96JG6 964 aa3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 SNX18Q96RF0 628 aa3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 FAM167BQ9BTA0 163 aa3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 ELOVL1Q9BW60 279 aa3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 ABHD16BQ9H3Z7 469 aa3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 CDCP1Q9H5V8 836 aa3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 CCDC134Q9H6E4 229 aa3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 ELAC1Q9H777 363 aaKnown RBP3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 KCNK9Q9NPC2 374 aa3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 SNX15Q9NRS6 342 aa3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 SH3BP4Q9P0V3 963 aa3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 KCND3Q9UK17 655 aa3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 FEM1BQ9UK73 627 aa3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 RAB21Q9UL25 225 aa3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 RCE1Q9Y256 329 aa3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 ZBTB1Q9Y2K1 713 aa3.28□□□□□ -1.88
R3HDM1-219ENST00000488035 FAM90A20PA6NIJ5 464 aa3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 AGAP5A6NIR3 686 aa3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 PRR23D1E9PI22 279 aaPredicted RBP3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 PRR23D2P0DMB1 279 aaPredicted RBP3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 MYCLP12524 364 aaPredicted RBP3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 CKMT1AP12532 417 aa3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 ADD2P35612 726 aa3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 PPM1FP49593 454 aaPredicted RBP3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 JAK3P52333 1124 aa3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 DGKQP52824 942 aa3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 FOXL2P58012 376 aa3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 RPL15P61313 204 aaKnown RBP3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 CCDC15Q0P6D6 951 aa3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 PDCLQ13371 301 aa3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 MFSD13AQ14CX5 517 aa3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 TBC1D25Q3MII6 688 aa3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 LRRC24Q50LG9 513 aa3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 ATPAF1Q5TC12 328 aaPredicted RBP3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 ACSM6Q6P461 480 aa3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 KIAA1324Q6UXG2 1013 aaKnown RBP3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 KYAT3Q6YP21 454 aaKnown RBP3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 TRIM72Q6ZMU5 477 aa3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 RAB11FIP2Q7L804 512 aa3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 ZDHHC17Q8IUH5 632 aa3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 HERC6Q8IVU3 1022 aa3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 CPXCR1Q8N123 301 aa3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 C12orf76Q8N812 135 aaPredicted RBP3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 CLEC4CQ8WTT0 213 aa3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 WDR60Q8WVS4 1066 aa3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 RUBCNQ92622 972 aa3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 RSC1A1Q92681 617 aa3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 C3orf49Q96BT1 292 aa3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 GCC1Q96CN9 775 aa3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 TRAPPC9Q96Q05 1148 aa3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 EIF3CQ99613 913 aaKnown RBP3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 BRD8Q9H0E9 1235 aa3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 TAF1DQ9H5J8 278 aaPredicted RBP3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 RXFP3Q9NSD7 469 aa3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 ABHD10Q9NUJ1 306 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms