RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 CHST8Q9H2A9 424 aa2.61□□□□□ -1.99
USP9X-208ENST00000487625 SAP30LQ9HAJ7 183 aa2.61□□□□□ -1.99
USP9X-208ENST00000487625 AS3MTQ9HBK9 375 aa2.61□□□□□ -1.99
USP9X-208ENST00000487625 ARL8BQ9NVJ2 186 aa2.61□□□□□ -1.99
USP9X-208ENST00000487625 DNAJB11Q9UBS4 358 aa2.61□□□□□ -1.99
USP9X-208ENST00000487625 AQP7P3A6NL99 342 aa2.6□□□□□ -1.99
USP9X-208ENST00000487625 ISM1B1AKI9 464 aa2.6□□□□□ -1.99
USP9X-208ENST00000487625 FAM227AF5H4B4 570 aa2.6□□□□□ -1.99
USP9X-208ENST00000487625 PRPF3O43395 683 aaKnown RBP2.6□□□□□ -1.99
USP9X-208ENST00000487625 FRS3O43559 492 aa2.6□□□□□ -1.99
USP9X-208ENST00000487625 CTNND1O60716 968 aaKnown RBP2.6□□□□□ -1.99
USP9X-208ENST00000487625 ZG16O60844 167 aa2.6□□□□□ -1.99
USP9X-208ENST00000487625 HOXC6P09630 235 aa2.6□□□□□ -1.99
USP9X-208ENST00000487625 ST6GAL1P15907 406 aa2.6□□□□□ -1.99
USP9X-208ENST00000487625 ZKSCAN1P17029 563 aaPredicted RBP2.6□□□□□ -1.99
USP9X-208ENST00000487625 TPH1P17752 444 aa2.6□□□□□ -1.99
USP9X-208ENST00000487625 RPS6KB1P23443 525 aa2.6□□□□□ -1.99
USP9X-208ENST00000487625 YY1P25490 414 aa2.6□□□□□ -1.99
USP9X-208ENST00000487625 IDUAP35475 653 aa2.6□□□□□ -1.99
USP9X-208ENST00000487625 JAK3P52333 1124 aa2.6□□□□□ -1.99
USP9X-208ENST00000487625 ERVK11-1P61568 191 aa2.6□□□□□ -1.99
USP9X-208ENST00000487625 WDR5P61964 334 aaKnown RBP2.6□□□□□ -1.99
USP9X-208ENST00000487625 FMO1Q01740 532 aa2.6□□□□□ -1.99
USP9X-208ENST00000487625 CCDC15Q0P6D6 951 aa2.6□□□□□ -1.99
USP9X-208ENST00000487625 MTAPQ13126 283 aa2.6□□□□□ -1.99
USP9X-208ENST00000487625 CLCA4Q14CN2 919 aa2.6□□□□□ -1.99
USP9X-208ENST00000487625 CCDC6Q16204 474 aa2.6□□□□□ -1.99
USP9X-208ENST00000487625 MANEALQ5VSG8 457 aa2.6□□□□□ -1.99
USP9X-208ENST00000487625 PLAG1Q6DJT9 500 aa2.6□□□□□ -1.99
USP9X-208ENST00000487625 FAM83HQ6ZRV2 1179 aaPredicted RBP2.6□□□□□ -1.99
USP9X-208ENST00000487625 TRAPPC11Q7Z392 1133 aa2.6□□□□□ -1.99
USP9X-208ENST00000487625 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.6□□□□□ -1.99
USP9X-208ENST00000487625 FAM71DQ8N9W8 422 aa2.6□□□□□ -1.99
USP9X-208ENST00000487625 VPS50Q96JG6 964 aa2.6□□□□□ -1.99
USP9X-208ENST00000487625 ZNF668Q96K58 619 aaPredicted RBP2.6□□□□□ -1.99
USP9X-208ENST00000487625 DCTN5Q9BTE1 182 aa2.6□□□□□ -1.99
USP9X-208ENST00000487625 FAM83DQ9H4H8 585 aa2.6□□□□□ -1.99
USP9X-208ENST00000487625 RETREG1Q9H6L5 497 aa2.6□□□□□ -1.99
USP9X-208ENST00000487625 TYW1Q9NV66 732 aaKnown RBP2.6□□□□□ -1.99
USP9X-208ENST00000487625 ZIM2Q9NZV7 527 aa2.6□□□□□ -1.99
USP9X-208ENST00000487625 RGS17Q9UGC6 210 aaPredicted RBP2.6□□□□□ -1.99
USP9X-208ENST00000487625 ANAPC4Q9UJX5 808 aa2.6□□□□□ -1.99
USP9X-208ENST00000487625 L1RE1Q9UN81 338 aa2.6□□□□□ -1.99
USP9X-208ENST00000487625 G3BP2Q9UN86 482 aaKnown RBP2.6□□□□□ -1.99
USP9X-208ENST00000487625 NOP58Q9Y2X3 529 aaKnown RBP2.6□□□□□ -1.99
USP9X-208ENST00000487625 SPATA31A1Q5TZJ5 1347 aa2.6□□□□□ -1.99
USP9X-208ENST00000487625 COL15A1P39059 1388 aa2.6□□□□□ -1.99
USP9X-208ENST00000487625 TRBV5-3A0A0A0MS03 114 aa2.59□□□□□ -1.99
USP9X-208ENST00000487625 RTL8CO15255 209 aa2.59□□□□□ -1.99
USP9X-208ENST00000487625 MARCH6O60337 910 aa2.59□□□□□ -1.99
USP9X-208ENST00000487625 SNX2O60749 519 aa2.59□□□□□ -1.99
USP9X-208ENST00000487625 WDR47O94967 919 aa2.59□□□□□ -1.99
USP9X-208ENST00000487625 CD63P08962 238 aa2.59□□□□□ -1.99
USP9X-208ENST00000487625 PDGFRBP09619 1106 aa2.59□□□□□ -1.99
USP9X-208ENST00000487625 ZNF883P0CG24 379 aa2.59□□□□□ -1.99
USP9X-208ENST00000487625 TMIGD3P0DMS9 266 aaPredicted RBP2.59□□□□□ -1.99
USP9X-208ENST00000487625 TMEM225BP0DP42 221 aa2.59□□□□□ -1.99
USP9X-208ENST00000487625 BTF3P20290 206 aaKnown RBP2.59□□□□□ -1.99
USP9X-208ENST00000487625 RFX2P48378 723 aa2.59□□□□□ -1.99
USP9X-208ENST00000487625 KIF5AQ12840 1032 aa2.59□□□□□ -1.99
USP9X-208ENST00000487625 DNASE1L3Q13609 305 aa2.59□□□□□ -1.99
USP9X-208ENST00000487625 SLC1A5Q15758 541 aa2.59□□□□□ -1.99
USP9X-208ENST00000487625 ZNF772Q68DY9 489 aaPredicted RBP2.59□□□□□ -1.99
USP9X-208ENST00000487625 RBM44Q6ZP01 1051 aaKnown RBP2.59□□□□□ -1.99
USP9X-208ENST00000487625 UNC13DQ70J99 1090 aa2.59□□□□□ -1.99
USP9X-208ENST00000487625 P3H2Q8IVL5 708 aa2.59□□□□□ -1.99
USP9X-208ENST00000487625 YAF2Q8IY57 180 aa2.59□□□□□ -1.99
USP9X-208ENST00000487625 RAVER1Q8IY67 606 aaKnown RBP2.59□□□□□ -1.99
USP9X-208ENST00000487625 SMCR8Q8TEV9 937 aaPredicted RBP2.59□□□□□ -1.99
USP9X-208ENST00000487625 PIGKQ92643 395 aa2.59□□□□□ -1.99
USP9X-208ENST00000487625 ZDHHC12Q96GR4 267 aa2.59□□□□□ -1.99
USP9X-208ENST00000487625 CINPQ9BW66 212 aaPredicted RBP2.59□□□□□ -1.99
USP9X-208ENST00000487625 MOV10Q9HCE1 1003 aaKnown RBP2.59□□□□□ -1.99
USP9X-208ENST00000487625 FZD3Q9NPG1 666 aa2.59□□□□□ -1.99
USP9X-208ENST00000487625 DDX56Q9NY93 547 aaKnown RBP2.59□□□□□ -1.99
USP9X-208ENST00000487625 ITGB1BP2Q9UKP3 347 aa2.59□□□□□ -1.99
USP9X-208ENST00000487625 TPCN1Q9ULQ1 816 aa2.59□□□□□ -1.99
USP9X-208ENST00000487625 HPSEQ9Y251 543 aa2.59□□□□□ -1.99
USP9X-208ENST00000487625 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.58□□□□□ -2
USP9X-208ENST00000487625 PRYO14603 147 aa2.58□□□□□ -2
USP9X-208ENST00000487625 CARSP49589 748 aaKnown RBP2.58□□□□□ -2
USP9X-208ENST00000487625 POU3F1Q03052 451 aaPredicted RBP2.58□□□□□ -2
USP9X-208ENST00000487625 CRYZQ08257 329 aaKnown RBP2.58□□□□□ -2
USP9X-208ENST00000487625 MTA1Q13330 715 aa2.58□□□□□ -2
USP9X-208ENST00000487625 GAB1Q13480 694 aa2.58□□□□□ -2
USP9X-208ENST00000487625 ACOX1Q15067 660 aa2.58□□□□□ -2
USP9X-208ENST00000487625 AASDHQ4L235 1098 aaPredicted RBP2.58□□□□□ -2
USP9X-208ENST00000487625 PMS2CLQ68D20 193 aa2.58□□□□□ -2
USP9X-208ENST00000487625 DSTYKQ6XUX3 929 aa2.58□□□□□ -2
USP9X-208ENST00000487625 FSTL5Q8N475 847 aaPredicted RBP2.58□□□□□ -2
USP9X-208ENST00000487625 MBD3L2Q8NHZ7 208 aaPredicted RBP2.58□□□□□ -2
USP9X-208ENST00000487625 BCAS4Q8TDM0 211 aa2.58□□□□□ -2
USP9X-208ENST00000487625 LRTOMTQ8WZ04 291 aa2.58□□□□□ -2
USP9X-208ENST00000487625 P2RY11Q96G91 374 aa2.58□□□□□ -2
USP9X-208ENST00000487625 PIMREGQ9BSJ6 248 aa2.58□□□□□ -2
USP9X-208ENST00000487625 C1QTNF4Q9BXJ3 329 aa2.58□□□□□ -2
USP9X-208ENST00000487625 ABHD10Q9NUJ1 306 aa2.58□□□□□ -2
USP9X-208ENST00000487625 OGDHLQ9ULD0 1010 aa2.58□□□□□ -2
USP9X-208ENST00000487625 NOB1Q9ULX3 412 aaKnown RBP2.58□□□□□ -2
USP9X-208ENST00000487625 CAPN11Q9UMQ6 739 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms