RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 CHST9Q7L1S5 443 aa25.55■■□□□ 1.68
LIME1-206ENST00000487026 WFDC5Q8TCV5 224 aa25.55■■□□□ 1.68
LIME1-206ENST00000487026 PRCCQ92733 491 aaPredicted RBP25.55■■□□□ 1.68
LIME1-206ENST00000487026 GPR174Q9BXC1 333 aa25.55■■□□□ 1.68
LIME1-206ENST00000487026 ACP6Q9NPH0 428 aa25.55■■□□□ 1.68
LIME1-206ENST00000487026 CEP295Q9C0D2 2601 aa25.54■■□□□ 1.68
LIME1-206ENST00000487026 ARHGAP33O14559 1287 aa25.54■■□□□ 1.68
LIME1-206ENST00000487026 TBL1XO60907 577 aa25.54■■□□□ 1.68
LIME1-206ENST00000487026 FBXO21O94952 628 aa25.54■■□□□ 1.68
LIME1-206ENST00000487026 SHC2P98077 582 aa25.54■■□□□ 1.68
LIME1-206ENST00000487026 ST3GAL2Q16842 350 aa25.54■■□□□ 1.68
LIME1-206ENST00000487026 FNDC3BQ53EP0 1204 aaKnown RBP25.54■■□□□ 1.68
LIME1-206ENST00000487026 FAM133BQ5BKY9 247 aaKnown RBP25.54■■□□□ 1.68
LIME1-206ENST00000487026 SYCP2LQ5T4T6 812 aa25.54■■□□□ 1.68
LIME1-206ENST00000487026 PIK3R6Q5UE93 754 aa25.54■■□□□ 1.68
LIME1-206ENST00000487026 GJB7Q6PEY0 223 aa25.54■■□□□ 1.68
LIME1-206ENST00000487026 ADIPOR2Q86V24 386 aa25.54■■□□□ 1.68
LIME1-206ENST00000487026 UNC45BQ8IWX7 931 aa25.54■■□□□ 1.68
LIME1-206ENST00000487026 ADAM32Q8TC27 787 aa25.54■■□□□ 1.68
LIME1-206ENST00000487026 FOXJ1Q92949 421 aa25.54■■□□□ 1.68
LIME1-206ENST00000487026 CRACR2AQ9BSW2 395 aa25.54■■□□□ 1.68
LIME1-206ENST00000487026 STIM2Q9P246 746 aa25.54■■□□□ 1.68
LIME1-206ENST00000487026 GGA2Q9UJY4 613 aa25.54■■□□□ 1.68
LIME1-206ENST00000487026 PLA2G4CQ9UP65 541 aa25.54■■□□□ 1.68
LIME1-206ENST00000487026 CNTN6Q9UQ52 1028 aa25.54■■□□□ 1.68
LIME1-206ENST00000487026 NAALADL1Q9UQQ1 740 aa25.54■■□□□ 1.68
LIME1-206ENST00000487026 KMT2BQ9UMN6 2715 aaPredicted RBP25.53■■□□□ 1.68
LIME1-206ENST00000487026 ACSL4O60488 711 aa25.53■■□□□ 1.68
LIME1-206ENST00000487026 LETM1O95202 739 aaPredicted RBP25.53■■□□□ 1.68
LIME1-206ENST00000487026 CD70P32970 193 aa25.53■■□□□ 1.68
LIME1-206ENST00000487026 SLC11A2P49281 568 aa25.53■■□□□ 1.68
LIME1-206ENST00000487026 ZNF445P59923 1031 aa25.53■■□□□ 1.68
LIME1-206ENST00000487026 FOXC1Q12948 553 aa25.53■■□□□ 1.68
LIME1-206ENST00000487026 E2F5Q15329 346 aa25.53■■□□□ 1.68
LIME1-206ENST00000487026 NUGGCQ68CJ6 796 aa25.53■■□□□ 1.68
LIME1-206ENST00000487026 NADSYN1Q6IA69 706 aa25.53■■□□□ 1.68
LIME1-206ENST00000487026 RABEPKQ7Z6M1 372 aa25.53■■□□□ 1.68
LIME1-206ENST00000487026 DQX1Q8TE96 717 aaKnown RBP25.53■■□□□ 1.68
LIME1-206ENST00000487026 KIAA1468Q9P260 1216 aa25.53■■□□□ 1.68
LIME1-206ENST00000487026 CYTH4Q9UIA0 394 aa25.53■■□□□ 1.68
LIME1-206ENST00000487026 TOP3BO95985 862 aaKnown RBP25.52■■□□□ 1.68
LIME1-206ENST00000487026 ACADMP11310 421 aa25.52■■□□□ 1.68
LIME1-206ENST00000487026 PABPC1P11940 636 aaKnown RBP25.52■■□□□ 1.68
LIME1-206ENST00000487026 SPINK2P20155 84 aa25.52■■□□□ 1.68
LIME1-206ENST00000487026 APBA1Q02410 837 aa25.52■■□□□ 1.68
LIME1-206ENST00000487026 RING1Q06587 406 aa25.52■■□□□ 1.68
LIME1-206ENST00000487026 PLEKHG6Q3KR16 790 aa25.52■■□□□ 1.68
LIME1-206ENST00000487026 WDR45BQ5MNZ6 344 aa25.52■■□□□ 1.68
LIME1-206ENST00000487026 MBLAC2Q68D91 279 aa25.52■■□□□ 1.68
LIME1-206ENST00000487026 KIAA0907Q7Z7F0 614 aaPredicted RBP25.52■■□□□ 1.68
LIME1-206ENST00000487026 FAM124AQ86V42 546 aa25.52■■□□□ 1.68
LIME1-206ENST00000487026 HDDC3Q8N4P3 179 aa25.52■■□□□ 1.68
LIME1-206ENST00000487026 MINDY1Q8N5J2 469 aa25.52■■□□□ 1.68
LIME1-206ENST00000487026 WFIKKN2Q8TEU8 576 aa25.52■■□□□ 1.68
LIME1-206ENST00000487026 FAM149B1Q96BN6 582 aa25.52■■□□□ 1.68
LIME1-206ENST00000487026 MYEOVQ96EZ4 313 aa25.52■■□□□ 1.68
LIME1-206ENST00000487026 FCRL2Q96LA5 508 aaPredicted RBP25.52■■□□□ 1.68
LIME1-206ENST00000487026 MED15Q96RN5 788 aa25.52■■□□□ 1.68
LIME1-206ENST00000487026 MEI4A8MW99 385 aa25.51■■□□□ 1.67
LIME1-206ENST00000487026 FGFR1OPO95684 399 aaKnown RBP25.51■■□□□ 1.67
LIME1-206ENST00000487026 SLC9A1P19634 815 aa25.51■■□□□ 1.67
LIME1-206ENST00000487026 RPL34P49207 117 aaKnown RBP25.51■■□□□ 1.67
LIME1-206ENST00000487026 SEMA3BQ13214 749 aa25.51■■□□□ 1.67
LIME1-206ENST00000487026 PTPRNQ16849 979 aa25.51■■□□□ 1.67
LIME1-206ENST00000487026 SYPL2Q5VXT5 272 aa25.51■■□□□ 1.67
LIME1-206ENST00000487026 AHI1Q8N157 1196 aa25.51■■□□□ 1.67
LIME1-206ENST00000487026 DDX51Q8N8A6 666 aaKnown RBP eCLIP25.51■■□□□ 1.67
LIME1-206ENST00000487026 ZNF606Q8WXB4 792 aa25.51■■□□□ 1.67
LIME1-206ENST00000487026 TMEM245Q9H330 911 aa25.51■■□□□ 1.67
LIME1-206ENST00000487026 SLC32A1Q9H598 525 aa25.51■■□□□ 1.67
LIME1-206ENST00000487026 RWDD2AQ9UIY3 292 aa25.51■■□□□ 1.67
LIME1-206ENST00000487026 THAP12O43422 761 aa25.5■■□□□ 1.67
LIME1-206ENST00000487026 OPHN1O60890 802 aa25.5■■□□□ 1.67
LIME1-206ENST00000487026 OXTRP30559 389 aa25.5■■□□□ 1.67
LIME1-206ENST00000487026 CAMK2GQ13555 558 aaPredicted RBP25.5■■□□□ 1.67
LIME1-206ENST00000487026 CKAP5Q14008 2032 aa25.5■■□□□ 1.67
LIME1-206ENST00000487026 DCAF12L1Q5VU92 463 aa25.5■■□□□ 1.67
LIME1-206ENST00000487026 PIP4P1Q86T03 277 aa25.5■■□□□ 1.67
LIME1-206ENST00000487026 OR2T3Q8NH03 318 aa25.5■■□□□ 1.67
LIME1-206ENST00000487026 AZIN2Q96A70 460 aa25.5■■□□□ 1.67
LIME1-206ENST00000487026 PCDH15Q96QU1 1955 aa25.5■■□□□ 1.67
LIME1-206ENST00000487026 SLC4A5Q9BY07 1137 aa25.5■■□□□ 1.67
LIME1-206ENST00000487026 MIR1-1HGQ9H1L0 117 aa25.5■■□□□ 1.67
LIME1-206ENST00000487026 SYPP08247 313 aa25.49■■□□□ 1.67
LIME1-206ENST00000487026 GNSP15586 552 aa25.49■■□□□ 1.67
LIME1-206ENST00000487026 POLR2EP19388 210 aaKnown RBP25.49■■□□□ 1.67
LIME1-206ENST00000487026 USP8P40818 1118 aa25.49■■□□□ 1.67
LIME1-206ENST00000487026 ACADSBP45954 432 aa25.49■■□□□ 1.67
LIME1-206ENST00000487026 RPS24P62847 133 aaKnown RBP25.49■■□□□ 1.67
LIME1-206ENST00000487026 ARHGAP44Q17R89 818 aa25.49■■□□□ 1.67
LIME1-206ENST00000487026 MPP7Q5T2T1 576 aa25.49■■□□□ 1.67
LIME1-206ENST00000487026 MFN1Q8IWA4 741 aa25.49■■□□□ 1.67
LIME1-206ENST00000487026 CADM4Q8NFZ8 388 aa25.49■■□□□ 1.67
LIME1-206ENST00000487026 DNASE2BQ8WZ79 361 aa25.49■■□□□ 1.67
LIME1-206ENST00000487026 PRICKLE1Q96MT3 831 aaPredicted RBP25.49■■□□□ 1.67
LIME1-206ENST00000487026 SERPINB11Q96P15 392 aa25.49■■□□□ 1.67
LIME1-206ENST00000487026 NUP58Q9BVL2 599 aa25.49■■□□□ 1.67
LIME1-206ENST00000487026 NUCKS1Q9H1E3 243 aaKnown RBP25.49■■□□□ 1.67
LIME1-206ENST00000487026 MTG2Q9H4K7 406 aa25.49■■□□□ 1.67
LIME1-206ENST00000487026 SUSD2Q9UGT4 822 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms