RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 CMASQ8NFW8 434 aaPredicted RBP12.74□□□□□ -0.37
HSPG2-211ENST00000486901 TMIGD2Q96BF3 282 aa12.74□□□□□ -0.37
HSPG2-211ENST00000486901 DCUN1D1Q96GG9 259 aa12.74□□□□□ -0.37
HSPG2-211ENST00000486901 XYLT2Q9H1B5 865 aa12.74□□□□□ -0.37
HSPG2-211ENST00000486901 ASNSD1Q9NWL6 643 aa12.74□□□□□ -0.37
HSPG2-211ENST00000486901 NFASCO94856 1347 aa12.74□□□□□ -0.37
HSPG2-211ENST00000486901 PDGFRBP09619 1106 aa12.74□□□□□ -0.37
HSPG2-211ENST00000486901 FAM200BP0CF97 657 aa12.74□□□□□ -0.37
HSPG2-211ENST00000486901 RALBP11234 206 aa12.74□□□□□ -0.37
HSPG2-211ENST00000486901 LCP1P13796 627 aa12.74□□□□□ -0.37
HSPG2-211ENST00000486901 CHN2P52757 468 aa12.74□□□□□ -0.37
HSPG2-211ENST00000486901 MBLAC2Q68D91 279 aa12.74□□□□□ -0.37
HSPG2-211ENST00000486901 ACAD11Q709F0 780 aa12.74□□□□□ -0.37
HSPG2-211ENST00000486901 SIGLEC10Q96LC7 697 aa12.74□□□□□ -0.37
HSPG2-211ENST00000486901 ZNF512Q96ME7 567 aaPredicted RBP12.74□□□□□ -0.37
HSPG2-211ENST00000486901 MRPL1Q9BYD6 325 aaKnown RBP12.74□□□□□ -0.37
HSPG2-211ENST00000486901 PAK5Q9P286 719 aa12.74□□□□□ -0.37
HSPG2-211ENST00000486901 TSPAN16Q9UKR8 245 aa12.74□□□□□ -0.37
HSPG2-211ENST00000486901 GREB1LQ9C091 1923 aaPredicted RBP12.74□□□□□ -0.37
HSPG2-211ENST00000486901 SRGAP2BP0DMP2 458 aa12.74□□□□□ -0.37
HSPG2-211ENST00000486901 CYP3A5P20815 502 aa12.74□□□□□ -0.37
HSPG2-211ENST00000486901 MPSTP25325 297 aa12.74□□□□□ -0.37
HSPG2-211ENST00000486901 NAMPTP43490 491 aa12.74□□□□□ -0.37
HSPG2-211ENST00000486901 NDST1P52848 882 aa12.74□□□□□ -0.37
HSPG2-211ENST00000486901 THOP1P52888 689 aa12.74□□□□□ -0.37
HSPG2-211ENST00000486901 CLDN10P78369 228 aa12.74□□□□□ -0.37
HSPG2-211ENST00000486901 DYNC1I2Q13409 638 aaKnown RBP12.74□□□□□ -0.37
HSPG2-211ENST00000486901 TUBB3Q13509 450 aa12.74□□□□□ -0.37
HSPG2-211ENST00000486901 TMEM132BQ14DG7 1078 aa12.74□□□□□ -0.37
HSPG2-211ENST00000486901 PCLAFQ15004 111 aa12.74□□□□□ -0.37
HSPG2-211ENST00000486901 R3HDM1Q15032 1099 aaKnown RBP12.74□□□□□ -0.37
HSPG2-211ENST00000486901 GLRA4Q5JXX5 417 aa12.74□□□□□ -0.37
HSPG2-211ENST00000486901 GJC2Q5T442 439 aaPredicted RBP12.74□□□□□ -0.37
HSPG2-211ENST00000486901 PCDH20Q8N6Y1 951 aaKnown RBP12.74□□□□□ -0.37
HSPG2-211ENST00000486901 GSDMBQ8TAX9 411 aa12.74□□□□□ -0.37
HSPG2-211ENST00000486901 RAB3IL1Q8TBN0 382 aa12.74□□□□□ -0.37
HSPG2-211ENST00000486901 SSX2IPQ9Y2D8 614 aa12.74□□□□□ -0.37
HSPG2-211ENST00000486901 FOCADQ5VW36 1801 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 TMEM233B4DJY2 109 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 WDR46O15213 610 aaKnown RBP12.73□□□□□ -0.37
HSPG2-211ENST00000486901 SEC24DO94855 1032 aaPredicted RBP12.73□□□□□ -0.37
HSPG2-211ENST00000486901 LDHAP00338 332 aaKnown RBP12.73□□□□□ -0.37
HSPG2-211ENST00000486901 JUNP05412 331 aaKnown RBP12.73□□□□□ -0.37
HSPG2-211ENST00000486901 HOXC6P09630 235 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 CYP2F1P24903 491 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 RXRBP28702 533 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 PRAMEP78395 509 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 GSTA3Q16772 222 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 CMPK2Q5EBM0 449 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 PMF1Q6P1K2 205 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 CYP2R1Q6VVX0 501 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 C1orf127Q8N9H9 656 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 ANKRD36BP1Q96IX9 119 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 LRGUKQ96M69 825 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 OMDQ99983 421 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 GSRP00390 522 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 COX4I1P13073 169 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 ADORA2BP29275 332 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 CDH15P55291 814 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 CDKL1Q00532 357 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 ZNF460Q14592 562 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 JADE1Q6IE81 842 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 KLHDC10Q6PID8 442 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 ZNF534Q76KX8 674 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 NIPA1Q7RTP0 329 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.73□□□□□ -0.378e-9■■■□□ 19.2
HSPG2-211ENST00000486901 COPS5Q92905 334 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 RCN3Q96D15 328 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 NPAS2Q99743 824 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 EBNA1BP2Q99848 306 aaKnown RBP12.73□□□□□ -0.37
HSPG2-211ENST00000486901 FAM192AQ9GZU8 254 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 PCDH18Q9HCL0 1135 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 SIX4Q9UIU6 781 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 AP4B1Q9Y6B7 739 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 LSM8O95777 96 aaKnown RBP12.73□□□□□ -0.37
HSPG2-211ENST00000486901 STAT5BP51692 787 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 MS4A2Q01362 244 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 LAMTOR4Q0VGL1 99 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 LSAMPQ13449 338 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 FLOT2Q14254 428 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 MYLK3Q32MK0 819 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 CCDC14Q49A88 953 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 CYP4V2Q6ZWL3 525 aaPredicted RBP12.73□□□□□ -0.37
HSPG2-211ENST00000486901 DCLK2Q8N568 766 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 BHLHE22Q8NFJ8 381 aaPredicted RBP12.73□□□□□ -0.37
HSPG2-211ENST00000486901 ZFP28Q8NHY6 868 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 FAM149B1Q96BN6 582 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 HSPBAP1Q96EW2 488 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 SORT1Q99523 831 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 DCUN1D5Q9BTE7 237 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 GMPR2Q9P2T1 348 aaKnown RBP12.73□□□□□ -0.37
HSPG2-211ENST00000486901 ZNF711Q9Y462 761 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 RPS6KL1Q9Y6S9 549 aa12.73□□□□□ -0.37
HSPG2-211ENST00000486901 BPTFQ12830 3046 aa12.72□□□□□ -0.37
HSPG2-211ENST00000486901 PHGDHO43175 533 aaKnown RBP12.72□□□□□ -0.37
HSPG2-211ENST00000486901 PLIN3O60664 434 aa12.72□□□□□ -0.37
HSPG2-211ENST00000486901 SNNO75324 88 aaPredicted RBP12.72□□□□□ -0.37
HSPG2-211ENST00000486901 ATG7O95352 703 aa12.72□□□□□ -0.37
HSPG2-211ENST00000486901 GOT1P17174 413 aa12.72□□□□□ -0.37
HSPG2-211ENST00000486901 FDFT1P37268 417 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms