RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 KLHDC10Q6PID8 442 aa12.01□□□□□ -0.49
PRKCB-207ENST00000486868 KDM7AQ6ZMT4 941 aa12.01□□□□□ -0.49
PRKCB-207ENST00000486868 TADA2BQ86TJ2 420 aa12.01□□□□□ -0.49
PRKCB-207ENST00000486868 DDX53Q86TM3 631 aaKnown RBP12.01□□□□□ -0.49
PRKCB-207ENST00000486868 CCDC25Q86WR0 208 aa12.01□□□□□ -0.49
PRKCB-207ENST00000486868 TDRPQ86YL5 185 aa12.01□□□□□ -0.49
PRKCB-207ENST00000486868 PDIK1LQ8N165 341 aa12.01□□□□□ -0.49
PRKCB-207ENST00000486868 PYROXD2Q8N2H3 581 aa12.01□□□□□ -0.49
PRKCB-207ENST00000486868 PDZD8Q8NEN9 1154 aa12.01□□□□□ -0.49
PRKCB-207ENST00000486868 BCL7CQ8WUZ0 217 aaPredicted RBP12.01□□□□□ -0.49
PRKCB-207ENST00000486868 HTR3CQ8WXA8 447 aa12.01□□□□□ -0.49
PRKCB-207ENST00000486868 TLCD1Q96CP7 247 aa12.01□□□□□ -0.49
PRKCB-207ENST00000486868 SPATA13Q96N96 652 aa12.01□□□□□ -0.49
PRKCB-207ENST00000486868 VAT1Q99536 393 aa12.01□□□□□ -0.49
PRKCB-207ENST00000486868 UBE2OQ9C0C9 1292 aaKnown RBP12.01□□□□□ -0.49
PRKCB-207ENST00000486868 NMUR1Q9HB89 426 aa12.01□□□□□ -0.49
PRKCB-207ENST00000486868 IL23AQ9NPF7 189 aa12.01□□□□□ -0.49
PRKCB-207ENST00000486868 EIF2B3Q9NR50 452 aaKnown RBP12.01□□□□□ -0.49
PRKCB-207ENST00000486868 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.01□□□□□ -0.49
PRKCB-207ENST00000486868 SPG21Q9NZD8 308 aa12.01□□□□□ -0.49
PRKCB-207ENST00000486868 OR12D3Q9UGF7 316 aa12.01□□□□□ -0.49
PRKCB-207ENST00000486868 PTPRDP23468 1912 aa12□□□□□ -0.49
PRKCB-207ENST00000486868 A0A087WUV0 522 aaPredicted RBP12□□□□□ -0.49
PRKCB-207ENST00000486868 TRIM43BA6NCK2 446 aa12□□□□□ -0.49
PRKCB-207ENST00000486868 SRRM3A6NNA2 597 aaPredicted RBP12□□□□□ -0.49
PRKCB-207ENST00000486868 E7EVH7 732 aa12□□□□□ -0.49
PRKCB-207ENST00000486868 I6L893 689 aaPredicted RBP12□□□□□ -0.49
PRKCB-207ENST00000486868 RASGRF2O14827 1237 aa12□□□□□ -0.49
PRKCB-207ENST00000486868 CREB3O43889 395 aa12□□□□□ -0.49
PRKCB-207ENST00000486868 LRIG2O94898 1065 aa12□□□□□ -0.49
PRKCB-207ENST00000486868 ABLIM3O94929 683 aa12□□□□□ -0.49
PRKCB-207ENST00000486868 GSTA2P09210 222 aa12□□□□□ -0.49
PRKCB-207ENST00000486868 MLNP12872 115 aa12□□□□□ -0.49
PRKCB-207ENST00000486868 RAG1P15918 1043 aa12□□□□□ -0.49
PRKCB-207ENST00000486868 PPP3CCP48454 512 aa12□□□□□ -0.49
PRKCB-207ENST00000486868 WDR5P61964 334 aaKnown RBP12□□□□□ -0.49
PRKCB-207ENST00000486868 PPIDQ08752 370 aaKnown RBP12□□□□□ -0.49
PRKCB-207ENST00000486868 GALNT2Q10471 571 aa12□□□□□ -0.49
PRKCB-207ENST00000486868 SEMA5AQ13591 1074 aa12□□□□□ -0.49
PRKCB-207ENST00000486868 TRIP4Q15650 581 aaPredicted RBP12□□□□□ -0.49
PRKCB-207ENST00000486868 DDR2Q16832 855 aa12□□□□□ -0.49
PRKCB-207ENST00000486868 KRT71Q3SY84 523 aa12□□□□□ -0.49
PRKCB-207ENST00000486868 RSPO2Q6UXX9 243 aaPredicted RBP12□□□□□ -0.49
PRKCB-207ENST00000486868 RNF19BQ6ZMZ0 732 aa12□□□□□ -0.49
PRKCB-207ENST00000486868 TAS1R1Q7RTX1 841 aa12□□□□□ -0.49
PRKCB-207ENST00000486868 PRUNE1Q86TP1 453 aa12□□□□□ -0.49
PRKCB-207ENST00000486868 TMEM173Q86WV6 379 aaPredicted RBP12□□□□□ -0.49
PRKCB-207ENST00000486868 VPS52Q8N1B4 723 aa12□□□□□ -0.49
PRKCB-207ENST00000486868 TET1Q8NFU7 2136 aa12□□□□□ -0.49
PRKCB-207ENST00000486868 ZNF461Q8TAF7 563 aa12□□□□□ -0.49
PRKCB-207ENST00000486868 RNF34Q969K3 372 aa12□□□□□ -0.49
PRKCB-207ENST00000486868 FBXO32Q969P5 355 aa12□□□□□ -0.49
PRKCB-207ENST00000486868 TRIM43Q96BQ3 446 aaPredicted RBP12□□□□□ -0.49
PRKCB-207ENST00000486868 HDAC11Q96DB2 347 aa12□□□□□ -0.49
PRKCB-207ENST00000486868 TMEM169Q96HH4 297 aa12□□□□□ -0.49
PRKCB-207ENST00000486868 TSGA13Q96PP4 275 aa12□□□□□ -0.49
PRKCB-207ENST00000486868 CATSPERBQ9H7T0 1116 aa12□□□□□ -0.49
PRKCB-207ENST00000486868 ANLNQ9NQW6 1124 aa12□□□□□ -0.49
PRKCB-207ENST00000486868 ETNK2Q9NVF9 386 aa12□□□□□ -0.49
PRKCB-207ENST00000486868 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12□□□□□ -0.49
PRKCB-207ENST00000486868 IGSF9Q9P2J2 1179 aa12□□□□□ -0.49
PRKCB-207ENST00000486868 SLC12A6Q9UHW9 1150 aa12□□□□□ -0.49
PRKCB-207ENST00000486868 SSX2IPQ9Y2D8 614 aa12□□□□□ -0.49
PRKCB-207ENST00000486868 PATJQ8NI35 1801 aa12□□□□□ -0.49
PRKCB-207ENST00000486868 NLRC5Q86WI3 1866 aa12□□□□□ -0.49
PRKCB-207ENST00000486868 SYNJ2BP-COX16A0A087WUM0 186 aa11.99□□□□□ -0.49
PRKCB-207ENST00000486868 NT5C1B-RDH14C9J2C7 533 aa11.99□□□□□ -0.49
PRKCB-207ENST00000486868 FAM72CH0Y354 149 aa11.99□□□□□ -0.49
PRKCB-207ENST00000486868 MFSD11O43934 449 aa11.99□□□□□ -0.49
PRKCB-207ENST00000486868 UPP2O95045 317 aa11.99□□□□□ -0.49
PRKCB-207ENST00000486868 CSH1P0DML2 217 aa11.99□□□□□ -0.49
PRKCB-207ENST00000486868 CSH2P0DML3 217 aa11.99□□□□□ -0.49
PRKCB-207ENST00000486868 PHBP35232 272 aa11.99□□□□□ -0.49
PRKCB-207ENST00000486868 MLLT6P55198 1093 aaPredicted RBP11.99□□□□□ -0.49
PRKCB-207ENST00000486868 SARNPP82979 210 aaKnown RBP11.99□□□□□ -0.49
PRKCB-207ENST00000486868 PPIGQ13427 754 aaKnown RBP eCLIP11.99□□□□□ -0.49
PRKCB-207ENST00000486868 RAB33AQ14088 237 aa11.99□□□□□ -0.49
PRKCB-207ENST00000486868 KYNUQ16719 465 aa11.99□□□□□ -0.49
PRKCB-207ENST00000486868 PARP6Q2NL67 630 aa11.99□□□□□ -0.49
PRKCB-207ENST00000486868 MGAT5BQ3V5L5 792 aa11.99□□□□□ -0.49
PRKCB-207ENST00000486868 FAM72AQ5TYM5 149 aa11.99□□□□□ -0.49
PRKCB-207ENST00000486868 FAM72DQ6L9T8 149 aa11.99□□□□□ -0.49
PRKCB-207ENST00000486868 KIAA1841Q6NSI8 718 aa11.99□□□□□ -0.49
PRKCB-207ENST00000486868 UBE2Q1Q7Z7E8 422 aa11.99□□□□□ -0.49
PRKCB-207ENST00000486868 FAM72BQ86X60 149 aa11.99□□□□□ -0.49
PRKCB-207ENST00000486868 ATP6V0D2Q8N8Y2 350 aa11.99□□□□□ -0.49
PRKCB-207ENST00000486868 ATP11CQ8NB49 1132 aa11.99□□□□□ -0.49
PRKCB-207ENST00000486868 COLGALT1Q8NBJ5 622 aa11.99□□□□□ -0.49
PRKCB-207ENST00000486868 ADAM32Q8TC27 787 aa11.99□□□□□ -0.49
PRKCB-207ENST00000486868 CASP10Q92851 521 aa11.99□□□□□ -0.49
PRKCB-207ENST00000486868 FATE1Q969F0 183 aa11.99□□□□□ -0.49
PRKCB-207ENST00000486868 TBC1D31Q96DN5 1066 aa11.99□□□□□ -0.49
PRKCB-207ENST00000486868 MYRFLQ96LU7 910 aa11.99□□□□□ -0.49
PRKCB-207ENST00000486868 VN1R3Q9BXE9 311 aa11.99□□□□□ -0.49
PRKCB-207ENST00000486868 MAGEB5Q9BZ81 275 aa11.99□□□□□ -0.49
PRKCB-207ENST00000486868 PRDM12Q9H4Q4 367 aa11.99□□□□□ -0.49
PRKCB-207ENST00000486868 CNOT10Q9H9A5 744 aaKnown RBP11.99□□□□□ -0.49
PRKCB-207ENST00000486868 XAB2Q9HCS7 855 aaKnown RBP11.99□□□□□ -0.49
PRKCB-207ENST00000486868 SAYSD1Q9NPB0 183 aa11.99□□□□□ -0.49
PRKCB-207ENST00000486868 RAB6BQ9NRW1 208 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms