RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 P2RY11Q96G91 374 aa18.53■□□□□ 0.56
PDLIM7-207ENST00000486828 FERMT1Q9BQL6 677 aa18.53■□□□□ 0.56
PDLIM7-207ENST00000486828 TMEM120AQ9BXJ8 343 aa18.53■□□□□ 0.56
PDLIM7-207ENST00000486828 TMPRSS4Q9NRS4 437 aa18.53■□□□□ 0.56
PDLIM7-207ENST00000486828 HEY2Q9UBP5 337 aa18.53■□□□□ 0.56
PDLIM7-207ENST00000486828 LNPEPQ9UIQ6 1025 aa18.53■□□□□ 0.56
PDLIM7-207ENST00000486828 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.53■□□□□ 0.56
PDLIM7-207ENST00000486828 Q9Y3F1 56 aa18.53■□□□□ 0.56
PDLIM7-207ENST00000486828 TRIP12Q14669 1992 aaPredicted RBP18.53■□□□□ 0.56
PDLIM7-207ENST00000486828 RNF103O00237 685 aa18.53■□□□□ 0.56
PDLIM7-207ENST00000486828 DNAJC6O75061 913 aa18.53■□□□□ 0.56
PDLIM7-207ENST00000486828 ALDH1A2O94788 518 aa18.53■□□□□ 0.56
PDLIM7-207ENST00000486828 GNAT1P11488 350 aa18.53■□□□□ 0.56
PDLIM7-207ENST00000486828 CNTFP26441 200 aa18.53■□□□□ 0.56
PDLIM7-207ENST00000486828 AP1B1Q10567 949 aa18.53■□□□□ 0.56
PDLIM7-207ENST00000486828 SREBF2Q12772 1141 aa18.53■□□□□ 0.56
PDLIM7-207ENST00000486828 PAFAH1B3Q15102 231 aaKnown RBP18.53■□□□□ 0.56
PDLIM7-207ENST00000486828 PDK1Q15118 436 aa18.53■□□□□ 0.56
PDLIM7-207ENST00000486828 MDH1BQ5I0G3 518 aa18.53■□□□□ 0.56
PDLIM7-207ENST00000486828 TIFABQ6ZNK6 161 aa18.53■□□□□ 0.56
PDLIM7-207ENST00000486828 IFNL1Q8IU54 200 aa18.53■□□□□ 0.56
PDLIM7-207ENST00000486828 WNT8BQ93098 351 aa18.53■□□□□ 0.56
PDLIM7-207ENST00000486828 MED10Q9BTT4 135 aa18.53■□□□□ 0.56
PDLIM7-207ENST00000486828 SLC13A1Q9BZW2 595 aa18.53■□□□□ 0.56
PDLIM7-207ENST00000486828 EBF2Q9HAK2 575 aa18.53■□□□□ 0.56
PDLIM7-207ENST00000486828 SYNJ2BP-COX16A0A087WUM0 186 aa18.52■□□□□ 0.56
PDLIM7-207ENST00000486828 WDR27A2RRH5 827 aa18.52■□□□□ 0.56
PDLIM7-207ENST00000486828 SDR42E2A6NKP2 422 aa18.52■□□□□ 0.56
PDLIM7-207ENST00000486828 PTPN4P29074 926 aa18.52■□□□□ 0.56
PDLIM7-207ENST00000486828 CRHR1P34998 444 aa18.52■□□□□ 0.56
PDLIM7-207ENST00000486828 VEGFBP49765 207 aa18.52■□□□□ 0.56
PDLIM7-207ENST00000486828 DEUP1Q05D60 604 aa18.52■□□□□ 0.56
PDLIM7-207ENST00000486828 DPYSQ14117 519 aa18.52■□□□□ 0.56
PDLIM7-207ENST00000486828 CCL14Q16627 93 aa18.52■□□□□ 0.56
PDLIM7-207ENST00000486828 MROH9Q5TGP6 573 aa18.52■□□□□ 0.56
PDLIM7-207ENST00000486828 KIAA0319Q5VV43 1072 aa18.52■□□□□ 0.56
PDLIM7-207ENST00000486828 SYPL2Q5VXT5 272 aa18.52■□□□□ 0.56
PDLIM7-207ENST00000486828 MARK2Q7KZI7 788 aaKnown RBP18.52■□□□□ 0.56
PDLIM7-207ENST00000486828 PDCD7Q8N8D1 485 aaKnown RBP18.52■□□□□ 0.56
PDLIM7-207ENST00000486828 ARMC2Q8NEN0 867 aa18.52■□□□□ 0.56
PDLIM7-207ENST00000486828 SKA1Q96BD8 255 aa18.52■□□□□ 0.56
PDLIM7-207ENST00000486828 ZFP42Q96MM3 310 aa18.52■□□□□ 0.56
PDLIM7-207ENST00000486828 TACO1Q9BSH4 297 aaKnown RBP18.52■□□□□ 0.56
PDLIM7-207ENST00000486828 TBC1D10AQ9BXI6 508 aa18.52■□□□□ 0.56
PDLIM7-207ENST00000486828 COX16Q9P0S2 106 aa18.52■□□□□ 0.56
PDLIM7-207ENST00000486828 SIRPGQ9P1W8 387 aa18.52■□□□□ 0.56
PDLIM7-207ENST00000486828 L3MBTL1Q9Y468 752 aa18.52■□□□□ 0.56
PDLIM7-207ENST00000486828 TSC2P49815 1807 aa18.51■□□□□ 0.55
PDLIM7-207ENST00000486828 F5H423 210 aaPredicted RBP18.51■□□□□ 0.55
PDLIM7-207ENST00000486828 I3L4J1 428 aa18.51■□□□□ 0.55
PDLIM7-207ENST00000486828 PPP1R12AO14974 1030 aaPredicted RBP18.51■□□□□ 0.55
PDLIM7-207ENST00000486828 CREB3O43889 395 aa18.51■□□□□ 0.55
PDLIM7-207ENST00000486828 HAUS5O94927 633 aa18.51■□□□□ 0.55
PDLIM7-207ENST00000486828 FAM200BP0CF97 657 aa18.51■□□□□ 0.55
PDLIM7-207ENST00000486828 TM4SF4P48230 202 aa18.51■□□□□ 0.55
PDLIM7-207ENST00000486828 TKTL1P51854 596 aa18.51■□□□□ 0.55
PDLIM7-207ENST00000486828 MAP3K7CLP57077 242 aa18.51■□□□□ 0.55
PDLIM7-207ENST00000486828 NME3Q13232 169 aa18.51■□□□□ 0.55
PDLIM7-207ENST00000486828 ATG16L1Q676U5 607 aa18.51■□□□□ 0.55
PDLIM7-207ENST00000486828 RFX8Q6ZV50 586 aa18.51■□□□□ 0.55
PDLIM7-207ENST00000486828 HFE2Q6ZVN8 426 aa18.51■□□□□ 0.55
PDLIM7-207ENST00000486828 CCNJLQ8IV13 435 aa18.51■□□□□ 0.55
PDLIM7-207ENST00000486828 NDUFAF2Q8N183 169 aa18.51■□□□□ 0.55
PDLIM7-207ENST00000486828 DNAJC5GQ8N7S2 189 aa18.51■□□□□ 0.55
PDLIM7-207ENST00000486828 C7orf26Q96N11 449 aa18.51■□□□□ 0.55
PDLIM7-207ENST00000486828 SLC9A7Q96T83 725 aa18.51■□□□□ 0.55
PDLIM7-207ENST00000486828 TUBB6Q9BUF5 446 aa18.51■□□□□ 0.55
PDLIM7-207ENST00000486828 KRT82Q9NSB4 513 aa18.51■□□□□ 0.55
PDLIM7-207ENST00000486828 PIGVQ9NUD9 493 aa18.51■□□□□ 0.55
PDLIM7-207ENST00000486828 PCMTD2Q9NV79 361 aa18.51■□□□□ 0.55
PDLIM7-207ENST00000486828 DDX43Q9NXZ2 648 aaKnown RBP18.51■□□□□ 0.55
PDLIM7-207ENST00000486828 MCM8Q9UJA3 840 aa18.51■□□□□ 0.55
PDLIM7-207ENST00000486828 EEF2KO00418 725 aaKnown RBP18.51■□□□□ 0.55
PDLIM7-207ENST00000486828 AOC2O75106 756 aa18.51■□□□□ 0.55
PDLIM7-207ENST00000486828 FBXO21O94952 628 aa18.51■□□□□ 0.55
PDLIM7-207ENST00000486828 AIF1P55008 147 aa18.51■□□□□ 0.55
PDLIM7-207ENST00000486828 CASC4Q6P4E1 433 aa18.51■□□□□ 0.55
PDLIM7-207ENST00000486828 RAB3IL1Q8TBN0 382 aa18.51■□□□□ 0.55
PDLIM7-207ENST00000486828 E2F7Q96AV8 911 aa18.51■□□□□ 0.55
PDLIM7-207ENST00000486828 SENP8Q96LD8 212 aa18.51■□□□□ 0.55
PDLIM7-207ENST00000486828 MECRQ9BV79 373 aa18.51■□□□□ 0.55
PDLIM7-207ENST00000486828 TLE6Q9H808 572 aa18.51■□□□□ 0.55
PDLIM7-207ENST00000486828 CRTAC1Q9NQ79 661 aa18.51■□□□□ 0.55
PDLIM7-207ENST00000486828 SLC38A7Q9NVC3 462 aa18.51■□□□□ 0.55
PDLIM7-207ENST00000486828 DCLK1O15075 740 aa18.5■□□□□ 0.55
PDLIM7-207ENST00000486828 PGAM1P18669 254 aa18.5■□□□□ 0.55
PDLIM7-207ENST00000486828 IGFBP6P24592 240 aaPredicted RBP18.5■□□□□ 0.55
PDLIM7-207ENST00000486828 SERPINB3P29508 390 aa18.5■□□□□ 0.55
PDLIM7-207ENST00000486828 PURAQ00577 322 aaKnown RBP18.5■□□□□ 0.55
PDLIM7-207ENST00000486828 NIPAL4Q0D2K0 466 aa18.5■□□□□ 0.55
PDLIM7-207ENST00000486828 WASHC5Q12768 1159 aa18.5■□□□□ 0.55
PDLIM7-207ENST00000486828 LONP2Q86WA8 852 aa18.5■□□□□ 0.55
PDLIM7-207ENST00000486828 NETO2Q8NC67 525 aa18.5■□□□□ 0.55
PDLIM7-207ENST00000486828 CCNYQ8ND76 341 aa18.5■□□□□ 0.55
PDLIM7-207ENST00000486828 ARNTL2Q8WYA1 636 aa18.5■□□□□ 0.55
PDLIM7-207ENST00000486828 NTAN1Q96AB6 310 aa18.5■□□□□ 0.55
PDLIM7-207ENST00000486828 ULBP1Q9BZM6 244 aa18.5■□□□□ 0.55
PDLIM7-207ENST00000486828 TSPYL2Q9H2G4 693 aaPredicted RBP18.5■□□□□ 0.55
PDLIM7-207ENST00000486828 PRDM12Q9H4Q4 367 aa18.5■□□□□ 0.55
PDLIM7-207ENST00000486828 NOP53Q9NZM5 478 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms