RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 DPP6P42658 865 aa10.94□□□□□ -0.66
CCDC171-208ENST00000486641 HARS2P49590 506 aaKnown RBP10.94□□□□□ -0.66
CCDC171-208ENST00000486641 TAP1Q03518 808 aa10.94□□□□□ -0.66
CCDC171-208ENST00000486641 MMRN1Q13201 1228 aa10.94□□□□□ -0.66
CCDC171-208ENST00000486641 PDE1CQ14123 709 aaPredicted RBP10.94□□□□□ -0.66
CCDC171-208ENST00000486641 HADHQ16836 314 aaKnown RBP10.94□□□□□ -0.66
CCDC171-208ENST00000486641 ABCB5Q2M3G0 1257 aa10.94□□□□□ -0.66
CCDC171-208ENST00000486641 ZNF829Q3KNS6 432 aaPredicted RBP10.94□□□□□ -0.66
CCDC171-208ENST00000486641 DCAF6Q58WW2 860 aa10.94□□□□□ -0.66
CCDC171-208ENST00000486641 WDR78Q5VTH9 848 aa10.94□□□□□ -0.66
CCDC171-208ENST00000486641 APOBEC3HQ6NTF7 200 aaKnown RBP10.94□□□□□ -0.66
CCDC171-208ENST00000486641 CCDC80Q76M96 950 aa10.94□□□□□ -0.66
CCDC171-208ENST00000486641 SNX32Q86XE0 403 aa10.94□□□□□ -0.66
CCDC171-208ENST00000486641 MYO1HQ8N1T3 1032 aa10.94□□□□□ -0.66
CCDC171-208ENST00000486641 CENPSQ8N2Z9 138 aa10.94□□□□□ -0.66
CCDC171-208ENST00000486641 PDCD6IPQ8WUM4 868 aaKnown RBP10.94□□□□□ -0.66
CCDC171-208ENST00000486641 DEPDC1BQ8WUY9 529 aa10.94□□□□□ -0.66
CCDC171-208ENST00000486641 BORCS5Q969J3 196 aa10.94□□□□□ -0.66
CCDC171-208ENST00000486641 PLEKHA8Q96JA3 519 aa10.94□□□□□ -0.66
CCDC171-208ENST00000486641 ZNF597Q96LX8 424 aa10.94□□□□□ -0.66
CCDC171-208ENST00000486641 OR52B2Q96RD2 323 aa10.94□□□□□ -0.66
CCDC171-208ENST00000486641 CALN1Q9BXU9 219 aa10.94□□□□□ -0.66
CCDC171-208ENST00000486641 ITGB1BP2Q9UKP3 347 aa10.94□□□□□ -0.66
CCDC171-208ENST00000486641 TRIM17Q9Y577 477 aa10.94□□□□□ -0.66
CCDC171-208ENST00000486641 SOBPA7XYQ1 873 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 H7C0C1 242 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 K7EPI3 171 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 RIMBP2O15034 1052 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 STAM2O75886 525 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 ATE1O95260 518 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 BMP10O95393 424 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 ZBTB11O95625 1053 aaPredicted RBP10.93□□□□□ -0.66
CCDC171-208ENST00000486641 ALDOAP04075 364 aaKnown RBP10.93□□□□□ -0.66
CCDC171-208ENST00000486641 APRTP07741 180 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 RALBP11234 206 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 ZNF12P17014 697 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 GRK2P25098 689 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 PIK3R1P27986 724 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 GMPRP36959 345 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 ATP5OP48047 213 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 ACOT2P49753 483 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 SERPINB9P50453 376 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 TUBA4AP68366 448 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 ZNF394Q53GI3 561 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 IL23RQ5VWK5 629 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 DCLRE1AQ6PJP8 1040 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 TMEM179Q6ZVK1 233 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 GPR141Q7Z602 305 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 TRIM50Q86XT4 487 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 UNC5BQ8IZJ1 945 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 ZNF781Q8N8C0 355 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 DDHD1Q8NEL9 900 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 RMND5BQ96G75 393 aaPredicted RBP10.93□□□□□ -0.66
CCDC171-208ENST00000486641 HEPHQ9BQS7 1158 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 GPATCH1Q9BRR8 931 aaKnown RBP10.93□□□□□ -0.66
CCDC171-208ENST00000486641 SLC4A5Q9BY07 1137 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 EHMT1Q9H9B1 1298 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 VPS45Q9NRW7 570 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 SLC17A6Q9P2U8 582 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 PPP1R1BQ9UD71 204 aaPredicted RBP10.93□□□□□ -0.66
CCDC171-208ENST00000486641 TJP2Q9UDY2 1190 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 BCAP29Q9UHQ4 241 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 VPS28Q9UK41 221 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 CDC14AQ9UNH5 594 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 FAM32AQ9Y421 112 aaKnown RBP10.93□□□□□ -0.66
CCDC171-208ENST00000486641 ZNF541Q9H0D2 1346 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 ADAMTSL1Q8N6G6 1762 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 RGSL1A5PLK6 1076 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 TPP1O14773 563 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 GLRA3O75311 464 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 BCAS2O75934 225 aaPredicted RBP10.93□□□□□ -0.66
CCDC171-208ENST00000486641 LYPLA2O95372 231 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 GSTT2P0CG29 244 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 GSTT2BP0CG30 244 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 GARTP22102 1010 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 GLDCP23378 1020 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 C21orf59P57076 290 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 NLRP11P59045 1033 aaKnown RBP10.93□□□□□ -0.66
CCDC171-208ENST00000486641 IKBKEQ14164 716 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 NOMO1Q15155 1222 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 KRT80Q6KB66 452 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 GPAT2Q6NUI2 795 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 XKR5Q6UX68 686 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 EMC1Q8N766 993 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 TMEM35BQ8NCS4 154 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 ZSCAN18Q8TBC5 510 aaPredicted RBP10.93□□□□□ -0.66
CCDC171-208ENST00000486641 C17orf50Q8WW18 174 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 ATP6V1E2Q96A05 226 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 THAP11Q96EK4 314 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 SIGLEC10Q96LC7 697 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 OSBPL11Q9BXB4 747 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 HIPK3Q9H422 1215 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 PNPLA3Q9NST1 481 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 TMEM216Q9P0N5 145 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 ARHGAP28Q9P2N2 729 aa10.93□□□□□ -0.66
CCDC171-208ENST00000486641 CROCCQ5TZA2 2017 aa10.92□□□□□ -0.66
CCDC171-208ENST00000486641 GOLGA8QA0A0J9YX86 632 aa10.92□□□□□ -0.66
CCDC171-208ENST00000486641 GOLGA8OA6NCC3 632 aa10.92□□□□□ -0.66
CCDC171-208ENST00000486641 WDR64B1ANS9 1081 aa10.92□□□□□ -0.66
CCDC171-208ENST00000486641 GOLGA8NF8WBI6 632 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms