RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 STXBP5Q5T5C0 1151 aa7.21□□□□□ -1.26
HDAC3-209ENST00000486618 HAUS3Q68CZ6 603 aa7.21□□□□□ -1.26
HDAC3-209ENST00000486618 CENPPQ6IPU0 288 aa7.21□□□□□ -1.26
HDAC3-209ENST00000486618 FSTL4Q6MZW2 842 aa7.21□□□□□ -1.26
HDAC3-209ENST00000486618 PKN3Q6P5Z2 889 aa7.21□□□□□ -1.26
HDAC3-209ENST00000486618 MPZL3Q6UWV2 235 aa7.21□□□□□ -1.26
HDAC3-209ENST00000486618 DSTYKQ6XUX3 929 aa7.21□□□□□ -1.26
HDAC3-209ENST00000486618 GAREM2Q75VX8 874 aa7.21□□□□□ -1.26
HDAC3-209ENST00000486618 SYT13Q7L8C5 426 aa7.21□□□□□ -1.26
HDAC3-209ENST00000486618 SDCCAG8Q86SQ7 713 aaPredicted RBP7.21□□□□□ -1.26
HDAC3-209ENST00000486618 PASD1Q8IV76 773 aa7.21□□□□□ -1.26
HDAC3-209ENST00000486618 UHMK1Q8TAS1 419 aaKnown RBP7.21□□□□□ -1.26
HDAC3-209ENST00000486618 SPATA18Q8TC71 538 aa7.21□□□□□ -1.26
HDAC3-209ENST00000486618 BRSK1Q8TDC3 778 aa7.21□□□□□ -1.26
HDAC3-209ENST00000486618 UTP4Q969X6 686 aaKnown RBP7.21□□□□□ -1.26
HDAC3-209ENST00000486618 C18orf25Q96B23 403 aaPredicted RBP7.21□□□□□ -1.26
HDAC3-209ENST00000486618 CRELD1Q96HD1 420 aa7.21□□□□□ -1.26
HDAC3-209ENST00000486618 FAM83CQ9BQN1 747 aa7.21□□□□□ -1.26
HDAC3-209ENST00000486618 GTPBP4Q9BZE4 634 aaKnown RBP7.21□□□□□ -1.26
HDAC3-209ENST00000486618 CAAP1Q9H8G2 361 aa7.21□□□□□ -1.26
HDAC3-209ENST00000486618 SMYD2Q9NRG4 433 aa7.21□□□□□ -1.26
HDAC3-209ENST00000486618 ARGLU1Q9NWB6 273 aaPredicted RBP7.21□□□□□ -1.26
HDAC3-209ENST00000486618 EBF1Q9UH73 591 aa7.21□□□□□ -1.26
HDAC3-209ENST00000486618 GGT7Q9UJ14 662 aa7.21□□□□□ -1.26
HDAC3-209ENST00000486618 LUC7L2Q9Y383 392 aaKnown RBP7.21□□□□□ -1.26
HDAC3-209ENST00000486618 NEUROG3Q9Y4Z2 214 aa7.21□□□□□ -1.26
HDAC3-209ENST00000486618 ZFHX4Q86UP3 3567 aa7.21□□□□□ -1.26
HDAC3-209ENST00000486618 FRYQ5TBA9 3013 aa7.21□□□□□ -1.26
HDAC3-209ENST00000486618 ACACAQ13085 2346 aa7.21□□□□□ -1.26
HDAC3-209ENST00000486618 MTMR11A4FU01 709 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 XPOTO43592 962 aaKnown RBP7.2□□□□□ -1.26
HDAC3-209ENST00000486618 HYAL3O43820 417 aaPredicted RBP7.2□□□□□ -1.26
HDAC3-209ENST00000486618 PLOD3O60568 738 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 PPFIA2O75334 1257 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 INMTO95050 263 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 VNN2O95498 520 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 PRAMEF12O95522 483 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 CNOT4O95628 575 aaKnown RBP7.2□□□□□ -1.26
HDAC3-209ENST00000486618 EGFP01133 1207 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 OR4Q2P0C623 313 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 TYMPP19971 482 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 CYP3A5P20815 502 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 SOX5P35711 763 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 AVPR1AP37288 418 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 ETFBP38117 255 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 ARL4DP49703 201 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 GALK1P51570 392 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 DGKEP52429 567 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 PEX3P56589 373 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 HSD17B7P56937 341 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 LMAN2Q12907 356 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 BFSP1Q12934 665 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 STRN3Q13033 797 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 DMP1Q13316 513 aaPredicted RBP7.2□□□□□ -1.26
HDAC3-209ENST00000486618 DMC1Q14565 340 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 MYBPC3Q14896 1274 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 PDGFRLQ15198 375 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 UAP1L1Q3KQV9 507 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 CFAP58Q5T655 872 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 OVOS1Q6IE37 1185 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 PLBD1Q6P4A8 553 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 CMTM8Q8IZV2 173 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 TAB3Q8N5C8 712 aaPredicted RBP7.2□□□□□ -1.26
HDAC3-209ENST00000486618 ATAD1Q8NBU5 361 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 KCT2Q8NC54 265 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 MSANTD4Q8NCY6 345 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 SNX21Q969T3 373 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 HIC2Q96JB3 615 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 MYRFLQ96LU7 910 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 CITED4Q96RK1 184 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 P2RY13Q9BPV8 354 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 TARS2Q9BW92 718 aaKnown RBP7.2□□□□□ -1.26
HDAC3-209ENST00000486618 MAK16Q9BXY0 300 aaKnown RBP7.2□□□□□ -1.26
HDAC3-209ENST00000486618 KIF9Q9HAQ2 790 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 POLD4Q9HCU8 107 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 PIH1D1Q9NWS0 290 aaKnown RBP7.2□□□□□ -1.26
HDAC3-209ENST00000486618 KCTD5Q9NXV2 234 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 STOML1Q9UBI4 398 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 UBQLN1Q9UMX0 589 aaKnown RBP7.2□□□□□ -1.26
HDAC3-209ENST00000486618 MSRB2Q9Y3D2 182 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 TIMM13Q9Y5L4 95 aaPredicted RBP7.2□□□□□ -1.26
HDAC3-209ENST00000486618 DENND4CQ5VZ89 1909 aa7.2□□□□□ -1.26
HDAC3-209ENST00000486618 MYH11P35749 1972 aa7.19□□□□□ -1.26
HDAC3-209ENST00000486618 ASXL3Q9C0F0 2248 aa7.19□□□□□ -1.26
HDAC3-209ENST00000486618 C2orf81A6NN90 581 aa7.19□□□□□ -1.26
HDAC3-209ENST00000486618 METTL12A8MUP2 240 aa7.19□□□□□ -1.26
HDAC3-209ENST00000486618 BTBD18B2RXH4 712 aa7.19□□□□□ -1.26
HDAC3-209ENST00000486618 H0Y626 953 aa7.19□□□□□ -1.26
HDAC3-209ENST00000486618 TAF4O00268 1085 aa7.19□□□□□ -1.26
HDAC3-209ENST00000486618 CDX4O14627 284 aaPredicted RBP7.19□□□□□ -1.26
HDAC3-209ENST00000486618 DCLK1O15075 740 aa7.19□□□□□ -1.26
HDAC3-209ENST00000486618 MUSKO15146 869 aa7.19□□□□□ -1.26
HDAC3-209ENST00000486618 PFKFB2O60825 505 aa7.19□□□□□ -1.26
HDAC3-209ENST00000486618 TOM1L1O75674 476 aa7.19□□□□□ -1.26
HDAC3-209ENST00000486618 TRIM16O95361 564 aa7.19□□□□□ -1.26
HDAC3-209ENST00000486618 TOP3BO95985 862 aaKnown RBP7.19□□□□□ -1.26
HDAC3-209ENST00000486618 CLTAP09496 248 aa7.19□□□□□ -1.26
HDAC3-209ENST00000486618 HARSP12081 509 aaKnown RBP7.19□□□□□ -1.26
HDAC3-209ENST00000486618 KRT10P13645 584 aa7.19□□□□□ -1.26
HDAC3-209ENST00000486618 PROZP22891 400 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms