RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 MAB21L3Q8N8X9 362 aa13.71□□□□□ -0.21
VTI1BP1-201ENST00000486325 PRELID2Q8N945 189 aa13.71□□□□□ -0.21
VTI1BP1-201ENST00000486325 C12orf50Q8NA57 414 aaPredicted RBP13.71□□□□□ -0.21
VTI1BP1-201ENST00000486325 VN1R2Q8NFZ6 395 aa13.71□□□□□ -0.21
VTI1BP1-201ENST00000486325 PCDH19Q8TAB3 1148 aa13.71□□□□□ -0.21
VTI1BP1-201ENST00000486325 P3H4Q92791 437 aa13.71□□□□□ -0.21
VTI1BP1-201ENST00000486325 ZNF707Q96C28 371 aaPredicted RBP13.71□□□□□ -0.21
VTI1BP1-201ENST00000486325 CYP2S1Q96SQ9 504 aa13.71□□□□□ -0.21
VTI1BP1-201ENST00000486325 SLITRK6Q9H5Y7 841 aa13.71□□□□□ -0.21
VTI1BP1-201ENST00000486325 CATSPERBQ9H7T0 1116 aa13.71□□□□□ -0.21
VTI1BP1-201ENST00000486325 ANLNQ9NQW6 1124 aa13.71□□□□□ -0.21
VTI1BP1-201ENST00000486325 RBM12Q9NTZ6 932 aaKnown RBP13.71□□□□□ -0.21
VTI1BP1-201ENST00000486325 HCFC1R1Q9NWW0 138 aa13.71□□□□□ -0.21
VTI1BP1-201ENST00000486325 LSM7Q9UK45 103 aaKnown RBP13.71□□□□□ -0.21
VTI1BP1-201ENST00000486325 COLQQ9Y215 455 aaPredicted RBP13.71□□□□□ -0.21
VTI1BP1-201ENST00000486325 DRG1Q9Y295 367 aaKnown RBP13.71□□□□□ -0.21
VTI1BP1-201ENST00000486325 MRPS23Q9Y3D9 190 aaKnown RBP13.71□□□□□ -0.21
VTI1BP1-201ENST00000486325 RAD54BQ9Y620 910 aa13.71□□□□□ -0.21
VTI1BP1-201ENST00000486325 FGF10O15520 208 aaPredicted RBP13.7□□□□□ -0.22
VTI1BP1-201ENST00000486325 ACSL4O60488 711 aa13.7□□□□□ -0.22
VTI1BP1-201ENST00000486325 ZNF189O75820 626 aaPredicted RBP13.7□□□□□ -0.22
VTI1BP1-201ENST00000486325 LRIG2O94898 1065 aa13.7□□□□□ -0.22
VTI1BP1-201ENST00000486325 MOCS2O96007 188 aaPredicted RBP13.7□□□□□ -0.22
VTI1BP1-201ENST00000486325 CKMP06732 381 aa13.7□□□□□ -0.22
VTI1BP1-201ENST00000486325 TUBBP07437 444 aa13.7□□□□□ -0.22
VTI1BP1-201ENST00000486325 GOT1P17174 413 aa13.7□□□□□ -0.22
VTI1BP1-201ENST00000486325 AVPR1AP37288 418 aa13.7□□□□□ -0.22
VTI1BP1-201ENST00000486325 KCNQ1P51787 676 aa13.7□□□□□ -0.22
VTI1BP1-201ENST00000486325 CYP4F8P98187 520 aa13.7□□□□□ -0.22
VTI1BP1-201ENST00000486325 C2orf54Q08AI8 447 aa13.7□□□□□ -0.22
VTI1BP1-201ENST00000486325 HYAL1Q12794 435 aa13.7□□□□□ -0.22
VTI1BP1-201ENST00000486325 ADAM15Q13444 863 aa13.7□□□□□ -0.22
VTI1BP1-201ENST00000486325 LLGL1Q15334 1064 aa13.7□□□□□ -0.22
VTI1BP1-201ENST00000486325 SIX1Q15475 284 aaPredicted RBP13.7□□□□□ -0.22
VTI1BP1-201ENST00000486325 GPR158Q5T848 1215 aa13.7□□□□□ -0.22
VTI1BP1-201ENST00000486325 ANKS1BQ7Z6G8 1248 aa13.7□□□□□ -0.22
VTI1BP1-201ENST00000486325 CMTM8Q8IZV2 173 aa13.7□□□□□ -0.22
VTI1BP1-201ENST00000486325 LZTR1Q8N653 840 aa13.7□□□□□ -0.22
VTI1BP1-201ENST00000486325 PLD5Q8N7P1 536 aa13.7□□□□□ -0.22
VTI1BP1-201ENST00000486325 ATL2Q8NHH9 583 aa13.7□□□□□ -0.22
VTI1BP1-201ENST00000486325 SHKBP1Q8TBC3 707 aa13.7□□□□□ -0.22
VTI1BP1-201ENST00000486325 GRK7Q8WTQ7 553 aa13.7□□□□□ -0.22
VTI1BP1-201ENST00000486325 TBC1D31Q96DN5 1066 aa13.7□□□□□ -0.22
VTI1BP1-201ENST00000486325 KRT12Q99456 494 aa13.7□□□□□ -0.22
VTI1BP1-201ENST00000486325 SLC46A2Q9BY10 475 aa13.7□□□□□ -0.22
VTI1BP1-201ENST00000486325 MAGEB5Q9BZ81 275 aa13.7□□□□□ -0.22
VTI1BP1-201ENST00000486325 TMPRSS4Q9NRS4 437 aa13.7□□□□□ -0.22
VTI1BP1-201ENST00000486325 PPARGC1AQ9UBK2 798 aaKnown RBP13.7□□□□□ -0.22
VTI1BP1-201ENST00000486325 HS3ST4Q9Y661 456 aa13.7□□□□□ -0.22
VTI1BP1-201ENST00000486325 TCRBV7S2A1N4TA0A589 114 aa13.69□□□□□ -0.22
VTI1BP1-201ENST00000486325 FAM72CH0Y354 149 aa13.69□□□□□ -0.22
VTI1BP1-201ENST00000486325 I6L893 689 aaPredicted RBP13.69□□□□□ -0.22
VTI1BP1-201ENST00000486325 NCAM2O15394 837 aa13.69□□□□□ -0.22
VTI1BP1-201ENST00000486325 STC2O76061 302 aa13.69□□□□□ -0.22
VTI1BP1-201ENST00000486325 ERCC2P18074 760 aa13.69□□□□□ -0.22
VTI1BP1-201ENST00000486325 AMPD1P23109 780 aa13.69□□□□□ -0.22
VTI1BP1-201ENST00000486325 EPHB2P29323 1055 aa13.69□□□□□ -0.22
VTI1BP1-201ENST00000486325 WEE1P30291 646 aa13.69□□□□□ -0.22
VTI1BP1-201ENST00000486325 SERPINB6P35237 376 aa13.69□□□□□ -0.22
VTI1BP1-201ENST00000486325 COILP38432 576 aaPredicted RBP13.69□□□□□ -0.22
VTI1BP1-201ENST00000486325 XRCC4Q13426 336 aa13.69□□□□□ -0.22
VTI1BP1-201ENST00000486325 AUHQ13825 339 aaKnown RBP13.69□□□□□ -0.22
VTI1BP1-201ENST00000486325 DPYSQ14117 519 aa13.69□□□□□ -0.22
VTI1BP1-201ENST00000486325 DHX34Q14147 1143 aaKnown RBP13.69□□□□□ -0.22
VTI1BP1-201ENST00000486325 MS4A13Q5J8X5 152 aa13.69□□□□□ -0.22
VTI1BP1-201ENST00000486325 PRSS36Q5K4E3 855 aa13.69□□□□□ -0.22
VTI1BP1-201ENST00000486325 FAM72AQ5TYM5 149 aa13.69□□□□□ -0.22
VTI1BP1-201ENST00000486325 FAM72DQ6L9T8 149 aa13.69□□□□□ -0.22
VTI1BP1-201ENST00000486325 ANKRD54Q6NXT1 300 aa13.69□□□□□ -0.22
VTI1BP1-201ENST00000486325 TMC5Q6UXY8 1006 aa13.69□□□□□ -0.22
VTI1BP1-201ENST00000486325 HTR3DQ70Z44 454 aa13.69□□□□□ -0.22
VTI1BP1-201ENST00000486325 GPR149Q86SP6 731 aa13.69□□□□□ -0.22
VTI1BP1-201ENST00000486325 FAM72BQ86X60 149 aa13.69□□□□□ -0.22
VTI1BP1-201ENST00000486325 KLHL7Q8IXQ5 586 aa13.69□□□□□ -0.22
VTI1BP1-201ENST00000486325 CCDC105Q8IYK2 499 aa13.69□□□□□ -0.22
VTI1BP1-201ENST00000486325 ZDHHC14Q8IZN3 488 aa13.69□□□□□ -0.22
VTI1BP1-201ENST00000486325 PQLC3Q8N755 202 aa13.69□□□□□ -0.22
VTI1BP1-201ENST00000486325 HERPUD2Q9BSE4 406 aa13.69□□□□□ -0.22
VTI1BP1-201ENST00000486325 PRDM12Q9H4Q4 367 aa13.69□□□□□ -0.22
VTI1BP1-201ENST00000486325 ARHGEF4Q9NR80 690 aa13.69□□□□□ -0.22
VTI1BP1-201ENST00000486325 GKN1Q9NS71 199 aa13.69□□□□□ -0.22
VTI1BP1-201ENST00000486325 PCYOX1Q9UHG3 505 aa13.69□□□□□ -0.22
VTI1BP1-201ENST00000486325 ARHGAP26Q9UNA1 814 aa13.69□□□□□ -0.22
VTI1BP1-201ENST00000486325 NR2E1Q9Y466 385 aa13.69□□□□□ -0.22
VTI1BP1-201ENST00000486325 CPQQ9Y646 472 aa13.69□□□□□ -0.22
VTI1BP1-201ENST00000486325 ANAPC1Q9H1A4 1944 aa13.68□□□□□ -0.22
VTI1BP1-201ENST00000486325 FAM187AA6NFU0 413 aa13.68□□□□□ -0.22
VTI1BP1-201ENST00000486325 DRGXA6NNA5 263 aa13.68□□□□□ -0.22
VTI1BP1-201ENST00000486325 WASH4PA8MWX3 477 aa13.68□□□□□ -0.22
VTI1BP1-201ENST00000486325 E9PAM4 449 aa13.68□□□□□ -0.22
VTI1BP1-201ENST00000486325 F5H5T6 163 aa13.68□□□□□ -0.22
VTI1BP1-201ENST00000486325 MCF2LO15068 1137 aa13.68□□□□□ -0.22
VTI1BP1-201ENST00000486325 CTIFO43310 598 aaKnown RBP13.68□□□□□ -0.22
VTI1BP1-201ENST00000486325 MOSPD3O75425 235 aa13.68□□□□□ -0.22
VTI1BP1-201ENST00000486325 TACR2P21452 398 aa13.68□□□□□ -0.22
VTI1BP1-201ENST00000486325 CORO1AP31146 461 aaKnown RBP13.68□□□□□ -0.22
VTI1BP1-201ENST00000486325 HOXC13P31276 330 aa13.68□□□□□ -0.22
VTI1BP1-201ENST00000486325 STIP1P31948 543 aaKnown RBP13.68□□□□□ -0.22
VTI1BP1-201ENST00000486325 GTF2F1P35269 517 aaKnown RBP eCLIP13.68□□□□□ -0.22
VTI1BP1-201ENST00000486325 CCR2P41597 374 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms