RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 ARTNQ5T4W7 220 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 NCBP2-AS2Q69YL0 99 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 DRICH1Q6PGQ1 229 aaPredicted RBP14.92□□□□□ -0.02
COL9A1-207ENST00000486080 ADGRD2Q7Z7M1 963 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 PRUNE1Q86TP1 453 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 TMC8Q8IU68 726 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 GSPT2Q8IYD1 628 aaKnown RBP14.92□□□□□ -0.02
COL9A1-207ENST00000486080 CCDC33Q8N5R6 958 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 NETO2Q8NC67 525 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 GDPD5Q8WTR4 605 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 LRRN4Q8WUT4 740 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 P3H4Q92791 437 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 SLCO2A1Q92959 643 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 NKD2Q969F2 451 aaPredicted RBP14.92□□□□□ -0.02
COL9A1-207ENST00000486080 CDK5RAP1Q96SZ6 601 aaKnown RBP14.92□□□□□ -0.02
COL9A1-207ENST00000486080 UXTQ9UBK9 157 aaPredicted RBP14.92□□□□□ -0.02
COL9A1-207ENST00000486080 DNMT3LQ9UJW3 386 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 ZNF148Q9UQR1 794 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 HS3ST4Q9Y661 456 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 NUP205Q92621 2012 aa14.91□□□□□ -0.02
COL9A1-207ENST00000486080 FAM187AA6NFU0 413 aa14.91□□□□□ -0.02
COL9A1-207ENST00000486080 DAPK3O43293 454 aa14.91□□□□□ -0.02
COL9A1-207ENST00000486080 SLC2A3P11169 496 aa14.91□□□□□ -0.02
COL9A1-207ENST00000486080 EIF3EP60228 445 aaKnown RBP14.91□□□□□ -0.02
COL9A1-207ENST00000486080 NOMO1Q15155 1222 aa14.91□□□□□ -0.02
COL9A1-207ENST00000486080 RAB30Q15771 203 aa14.91□□□□□ -0.02
COL9A1-207ENST00000486080 PIK3R6Q5UE93 754 aa14.91□□□□□ -0.02
COL9A1-207ENST00000486080 GAREM2Q75VX8 874 aa14.91□□□□□ -0.02
COL9A1-207ENST00000486080 C14orf80Q86SX3 495 aa14.91□□□□□ -0.02
COL9A1-207ENST00000486080 ZC3H18Q86VM9 953 aaKnown RBP14.91□□□□□ -0.02
COL9A1-207ENST00000486080 IFT81Q8WYA0 676 aa14.91□□□□□ -0.02
COL9A1-207ENST00000486080 RUNDC3BQ96NL0 473 aa14.91□□□□□ -0.02
COL9A1-207ENST00000486080 CYP2S1Q96SQ9 504 aa14.91□□□□□ -0.02
COL9A1-207ENST00000486080 EPAS1Q99814 870 aa14.91□□□□□ -0.02
COL9A1-207ENST00000486080 ERP44Q9BS26 406 aa14.91□□□□□ -0.02
COL9A1-207ENST00000486080 TMEM121Q9BTD3 319 aa14.91□□□□□ -0.02
COL9A1-207ENST00000486080 NACA2Q9H009 215 aa14.91□□□□□ -0.02
COL9A1-207ENST00000486080 DPH5Q9H2P9 285 aa14.91□□□□□ -0.02
COL9A1-207ENST00000486080 HCFC1R1Q9NWW0 138 aa14.91□□□□□ -0.02
COL9A1-207ENST00000486080 OAS1P00973 400 aaKnown RBP14.9□□□□□ -0.02
COL9A1-207ENST00000486080 APOEP02649 317 aa14.9□□□□□ -0.02
COL9A1-207ENST00000486080 ERCC2P18074 760 aa14.9□□□□□ -0.02
COL9A1-207ENST00000486080 GABRR2P28476 465 aa14.9□□□□□ -0.02
COL9A1-207ENST00000486080 PPP3CCP48454 512 aa14.9□□□□□ -0.02
COL9A1-207ENST00000486080 HCAR3P49019 387 aa14.9□□□□□ -0.02
COL9A1-207ENST00000486080 CARSP49589 748 aaKnown RBP14.9□□□□□ -0.02
COL9A1-207ENST00000486080 RBM10P98175 930 aaKnown RBP14.9□□□□□ -0.02
COL9A1-207ENST00000486080 PPP1R7Q15435 360 aa14.9□□□□□ -0.02
COL9A1-207ENST00000486080 TXNDC8Q6A555 127 aa14.9□□□□□ -0.02
COL9A1-207ENST00000486080 PDE12Q6L8Q7 609 aaKnown RBP14.9□□□□□ -0.02
COL9A1-207ENST00000486080 KLHDC10Q6PID8 442 aa14.9□□□□□ -0.02
COL9A1-207ENST00000486080 CCNI2Q6ZMN8 369 aaPredicted RBP14.9□□□□□ -0.02
COL9A1-207ENST00000486080 IFT20Q8IY31 132 aa14.9□□□□□ -0.02
COL9A1-207ENST00000486080 GLIS1Q8NBF1 620 aa14.9□□□□□ -0.02
COL9A1-207ENST00000486080 SLC22A12Q96S37 553 aa14.9□□□□□ -0.02
COL9A1-207ENST00000486080 CORO1BQ9BR76 489 aa14.9□□□□□ -0.02
COL9A1-207ENST00000486080 FRMD8P1Q9BZ68 369 aaPredicted RBP14.9□□□□□ -0.02
COL9A1-207ENST00000486080 SLC28A3Q9HAS3 691 aa14.9□□□□□ -0.02
COL9A1-207ENST00000486080 TRPC7Q9HCX4 862 aa14.9□□□□□ -0.02
COL9A1-207ENST00000486080 GKN1Q9NS71 199 aa14.9□□□□□ -0.02
COL9A1-207ENST00000486080 NEU3Q9UQ49 428 aa14.9□□□□□ -0.02
COL9A1-207ENST00000486080 DRG1Q9Y295 367 aaKnown RBP14.9□□□□□ -0.02
COL9A1-207ENST00000486080 UTP11Q9Y3A2 253 aaKnown RBP14.9□□□□□ -0.02
COL9A1-207ENST00000486080 NEU2Q9Y3R4 380 aa14.9□□□□□ -0.02
COL9A1-207ENST00000486080 HBS1LQ9Y450 684 aaKnown RBP14.9□□□□□ -0.02
COL9A1-207ENST00000486080 DOCK4Q8N1I0 1966 aa14.9□□□□□ -0.02
COL9A1-207ENST00000486080 RFXAPO00287 272 aa14.89□□□□□ -0.03
COL9A1-207ENST00000486080 MCF2LO15068 1137 aa14.89□□□□□ -0.03
COL9A1-207ENST00000486080 DCLK1O15075 740 aa14.89□□□□□ -0.03
COL9A1-207ENST00000486080 ITGAVP06756 1048 aa14.89□□□□□ -0.03
COL9A1-207ENST00000486080 RBP3P10745 1247 aa14.89□□□□□ -0.03
COL9A1-207ENST00000486080 ETS1P14921 441 aa14.89□□□□□ -0.03
COL9A1-207ENST00000486080 ZFXP17010 805 aaPredicted RBP14.89□□□□□ -0.03
COL9A1-207ENST00000486080 EPHB2P29323 1055 aa14.89□□□□□ -0.03
COL9A1-207ENST00000486080 TUBP50607 506 aa14.89□□□□□ -0.03
COL9A1-207ENST00000486080 MLLT6P55198 1093 aaPredicted RBP14.89□□□□□ -0.03
COL9A1-207ENST00000486080 CYP4F8P98187 520 aa14.89□□□□□ -0.03
COL9A1-207ENST00000486080 FAM182AQ5T1J6 154 aa14.89□□□□□ -0.03
COL9A1-207ENST00000486080 DUPD1Q68J44 220 aa14.89□□□□□ -0.03
COL9A1-207ENST00000486080 GSTA5Q7RTV2 222 aa14.89□□□□□ -0.03
COL9A1-207ENST00000486080 TADA2BQ86TJ2 420 aa14.89□□□□□ -0.03
COL9A1-207ENST00000486080 TP53INP2Q8IXH6 220 aa14.89□□□□□ -0.03
COL9A1-207ENST00000486080 ELMOD1Q8N336 334 aa14.89□□□□□ -0.03
COL9A1-207ENST00000486080 ALLCQ8N6M5 410 aa14.89□□□□□ -0.03
COL9A1-207ENST00000486080 GRK7Q8WTQ7 553 aa14.89□□□□□ -0.03
COL9A1-207ENST00000486080 DTLQ9NZJ0 730 aa14.89□□□□□ -0.03
COL9A1-207ENST00000486080 FEZ2Q9UHY8 353 aaPredicted RBP14.89□□□□□ -0.03
COL9A1-207ENST00000486080 SNX24Q9Y343 169 aa14.89□□□□□ -0.03
COL9A1-207ENST00000486080 NOTCH4Q99466 2003 aa14.89□□□□□ -0.03
COL9A1-207ENST00000486080 MFSD11O43934 449 aa14.89□□□□□ -0.03
COL9A1-207ENST00000486080 MYL4P12829 197 aa14.89□□□□□ -0.03
COL9A1-207ENST00000486080 GJA1P17302 382 aa14.89□□□□□ -0.03
COL9A1-207ENST00000486080 CLCN6P51797 869 aa14.89□□□□□ -0.03
COL9A1-207ENST00000486080 KPNA1P52294 538 aaPredicted RBP14.89□□□□□ -0.03
COL9A1-207ENST00000486080 GDF10P55107 478 aa14.89□□□□□ -0.03
COL9A1-207ENST00000486080 MLLT1Q03111 559 aaPredicted RBP14.89□□□□□ -0.03
COL9A1-207ENST00000486080 RING1Q06587 406 aa14.89□□□□□ -0.03
COL9A1-207ENST00000486080 BRD3Q15059 726 aa14.89□□□□□ -0.03
COL9A1-207ENST00000486080 PABPC1LQ4VXU2 614 aaKnown RBP14.89□□□□□ -0.03
COL9A1-207ENST00000486080 MS4A13Q5J8X5 152 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms