RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 NUMA1Q14980 2115 aa21.75■■□□□ 1.07
LMBR1-217ENST00000485985 CAMK4Q16566 473 aa21.75■■□□□ 1.07
LMBR1-217ENST00000485985 FUT11Q495W5 492 aa21.75■■□□□ 1.07
LMBR1-217ENST00000485985 SORCS1Q8WY21 1168 aa21.75■■□□□ 1.07
LMBR1-217ENST00000485985 IRGQQ8WZA9 623 aa21.75■■□□□ 1.07
LMBR1-217ENST00000485985 ZNF419Q96HQ0 510 aaPredicted RBP21.75■■□□□ 1.07
LMBR1-217ENST00000485985 HSPA12BQ96MM6 686 aa21.75■■□□□ 1.07
LMBR1-217ENST00000485985 DNAAF2Q9NVR5 837 aaKnown RBP21.75■■□□□ 1.07
LMBR1-217ENST00000485985 KIAA1468Q9P260 1216 aa21.75■■□□□ 1.07
LMBR1-217ENST00000485985 LTFP02788 710 aa21.74■■□□□ 1.07
LMBR1-217ENST00000485985 SYPP08247 313 aa21.74■■□□□ 1.07
LMBR1-217ENST00000485985 RDXP35241 583 aaKnown RBP21.74■■□□□ 1.07
LMBR1-217ENST00000485985 SLC2A11Q9BYW1 496 aa21.74■■□□□ 1.07
LMBR1-217ENST00000485985 MKRN2Q9H000 416 aaKnown RBP21.74■■□□□ 1.07
LMBR1-217ENST00000485985 SPEGQ15772 3267 aa21.74■■□□□ 1.07
LMBR1-217ENST00000485985 FAM221BA6H8Z2 402 aa21.73■■□□□ 1.07
LMBR1-217ENST00000485985 NDUFS2O75306 463 aa21.73■■□□□ 1.07
LMBR1-217ENST00000485985 LATS1O95835 1130 aa21.73■■□□□ 1.07
LMBR1-217ENST00000485985 PRKCHP24723 683 aa21.73■■□□□ 1.07
LMBR1-217ENST00000485985 HLA-FP30511 346 aa21.73■■□□□ 1.07
LMBR1-217ENST00000485985 UBE2HP62256 183 aa21.73■■□□□ 1.07
LMBR1-217ENST00000485985 HNRNPDQ14103 355 aaKnown RBP21.73■■□□□ 1.07
LMBR1-217ENST00000485985 ZNF234Q14588 700 aa21.73■■□□□ 1.07
LMBR1-217ENST00000485985 EIF4HQ15056 248 aaKnown RBP21.73■■□□□ 1.07
LMBR1-217ENST00000485985 MPPE1Q53F39 396 aa21.73■■□□□ 1.07
LMBR1-217ENST00000485985 ADGRF1Q5T601 910 aa21.73■■□□□ 1.07
LMBR1-217ENST00000485985 KIAA1324Q6UXG2 1013 aaKnown RBP21.73■■□□□ 1.07
LMBR1-217ENST00000485985 RGL4Q8IZJ4 473 aa21.73■■□□□ 1.07
LMBR1-217ENST00000485985 CHCHD4Q8N4Q1 142 aa21.73■■□□□ 1.07
LMBR1-217ENST00000485985 HSFY1Q96LI6 401 aa21.73■■□□□ 1.07
LMBR1-217ENST00000485985 CIPCQ9C0C6 399 aa21.73■■□□□ 1.07
LMBR1-217ENST00000485985 MIS12Q9H081 205 aa21.73■■□□□ 1.07
LMBR1-217ENST00000485985 ACP6Q9NPH0 428 aa21.73■■□□□ 1.07
LMBR1-217ENST00000485985 ELOVL2Q9NXB9 296 aa21.73■■□□□ 1.07
LMBR1-217ENST00000485985 RWDD2AQ9UIY3 292 aa21.73■■□□□ 1.07
LMBR1-217ENST00000485985 BAHCC1Q9P281 2608 aa21.73■■□□□ 1.07
LMBR1-217ENST00000485985 NPC1O15118 1278 aa21.72■■□□□ 1.07
LMBR1-217ENST00000485985 FYNP06241 537 aa21.72■■□□□ 1.07
LMBR1-217ENST00000485985 KRT5P13647 590 aa21.72■■□□□ 1.07
LMBR1-217ENST00000485985 GPD2P43304 727 aa21.72■■□□□ 1.07
LMBR1-217ENST00000485985 RPL34P49207 117 aaKnown RBP21.72■■□□□ 1.07
LMBR1-217ENST00000485985 APBA1Q02410 837 aa21.72■■□□□ 1.07
LMBR1-217ENST00000485985 STARD3Q14849 445 aa21.72■■□□□ 1.07
LMBR1-217ENST00000485985 PLEKHG6Q3KR16 790 aa21.72■■□□□ 1.07
LMBR1-217ENST00000485985 FAM133BQ5BKY9 247 aaKnown RBP21.72■■□□□ 1.07
LMBR1-217ENST00000485985 SYCP2LQ5T4T6 812 aa21.72■■□□□ 1.07
LMBR1-217ENST00000485985 DENND1BQ6P3S1 775 aa21.72■■□□□ 1.07
LMBR1-217ENST00000485985 RFWD3Q6PCD5 774 aa21.72■■□□□ 1.07
LMBR1-217ENST00000485985 GJB7Q6PEY0 223 aa21.72■■□□□ 1.07
LMBR1-217ENST00000485985 TRIM65Q6PJ69 517 aa21.72■■□□□ 1.07
LMBR1-217ENST00000485985 WFDC5Q8TCV5 224 aa21.72■■□□□ 1.07
LMBR1-217ENST00000485985 UCMAQ8WVF2 138 aa21.72■■□□□ 1.07
LMBR1-217ENST00000485985 FOXJ1Q92949 421 aa21.72■■□□□ 1.07
LMBR1-217ENST00000485985 CRACR2AQ9BSW2 395 aa21.72■■□□□ 1.07
LMBR1-217ENST00000485985 SUSD2Q9UGT4 822 aa21.72■■□□□ 1.07
LMBR1-217ENST00000485985 CYTH4Q9UIA0 394 aa21.72■■□□□ 1.07
LMBR1-217ENST00000485985 TP53BP1Q12888 1972 aaPredicted RBP21.72■■□□□ 1.07
LMBR1-217ENST00000485985 GJB3O75712 270 aa21.71■■□□□ 1.07
LMBR1-217ENST00000485985 FBXO21O94952 628 aa21.71■■□□□ 1.07
LMBR1-217ENST00000485985 SLC6A4P31645 630 aa21.71■■□□□ 1.07
LMBR1-217ENST00000485985 ZNF445P59923 1031 aa21.71■■□□□ 1.07
LMBR1-217ENST00000485985 SLC14A1Q13336 389 aa21.71■■□□□ 1.07
LMBR1-217ENST00000485985 ZNF423Q2M1K9 1284 aa21.71■■□□□ 1.07
LMBR1-217ENST00000485985 RAB44Q7Z6P3 723 aaPredicted RBP21.71■■□□□ 1.07
LMBR1-217ENST00000485985 PRDM16Q9HAZ2 1276 aa21.71■■□□□ 1.07
LMBR1-217ENST00000485985 UBE2TQ9NPD8 197 aaPredicted RBP21.71■■□□□ 1.07
LMBR1-217ENST00000485985 USP36Q9P275 1121 aaKnown RBP21.71■■□□□ 1.07
LMBR1-217ENST00000485985 GOLGA6L7A0A1B0GV03 622 aa21.7■■□□□ 1.06
LMBR1-217ENST00000485985 SH3BP5O60239 455 aa21.7■■□□□ 1.06
LMBR1-217ENST00000485985 NCAM1P13591 858 aa21.7■■□□□ 1.06
LMBR1-217ENST00000485985 HOXB3P14651 431 aaPredicted RBP21.7■■□□□ 1.06
LMBR1-217ENST00000485985 COPAP53621 1224 aa21.7■■□□□ 1.06
LMBR1-217ENST00000485985 WDR45BQ5MNZ6 344 aa21.7■■□□□ 1.06
LMBR1-217ENST00000485985 NADSYN1Q6IA69 706 aa21.7■■□□□ 1.06
LMBR1-217ENST00000485985 METTL3Q86U44 580 aaKnown RBP21.7■■□□□ 1.06
LMBR1-217ENST00000485985 CACUL1Q86Y37 369 aa21.7■■□□□ 1.06
LMBR1-217ENST00000485985 IRF2BP1Q8IU81 584 aa21.7■■□□□ 1.06
LMBR1-217ENST00000485985 SCUBE3Q8IX30 993 aa21.7■■□□□ 1.06
LMBR1-217ENST00000485985 DQX1Q8TE96 717 aaKnown RBP21.7■■□□□ 1.06
LMBR1-217ENST00000485985 FCRL2Q96LA5 508 aaPredicted RBP21.7■■□□□ 1.06
LMBR1-217ENST00000485985 PRICKLE1Q96MT3 831 aaPredicted RBP21.7■■□□□ 1.06
LMBR1-217ENST00000485985 CAMK1GQ96NX5 476 aa21.7■■□□□ 1.06
LMBR1-217ENST00000485985 ABCB8Q9NUT2 735 aa21.7■■□□□ 1.06
LMBR1-217ENST00000485985 BECN2A8MW95 431 aa21.69■■□□□ 1.06
LMBR1-217ENST00000485985 KCNJ18B7U540 433 aa21.69■■□□□ 1.06
LMBR1-217ENST00000485985 LETM1O95202 739 aaPredicted RBP21.69■■□□□ 1.06
LMBR1-217ENST00000485985 FGFR1OPO95684 399 aaKnown RBP21.69■■□□□ 1.06
LMBR1-217ENST00000485985 GNSP15586 552 aa21.69■■□□□ 1.06
LMBR1-217ENST00000485985 SLC9A1P19634 815 aa21.69■■□□□ 1.06
LMBR1-217ENST00000485985 MAOBP27338 520 aa21.69■■□□□ 1.06
LMBR1-217ENST00000485985 CD6P30203 668 aa21.69■■□□□ 1.06
LMBR1-217ENST00000485985 TBX4P57082 545 aa21.69■■□□□ 1.06
LMBR1-217ENST00000485985 RING1Q06587 406 aa21.69■■□□□ 1.06
LMBR1-217ENST00000485985 TRIP6Q15654 476 aaKnown RBP21.69■■□□□ 1.06
LMBR1-217ENST00000485985 PIK3R6Q5UE93 754 aa21.69■■□□□ 1.06
LMBR1-217ENST00000485985 NUGGCQ68CJ6 796 aa21.69■■□□□ 1.06
LMBR1-217ENST00000485985 SERPINA13PQ6UXR4 307 aa21.69■■□□□ 1.06
LMBR1-217ENST00000485985 KIAA0907Q7Z7F0 614 aaPredicted RBP21.69■■□□□ 1.06
LMBR1-217ENST00000485985 ADIPOR2Q86V24 386 aa21.69■■□□□ 1.06
LMBR1-217ENST00000485985 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.69■■□□□ 1.069e-7■■■■□ 22.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms