RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 OVCA2Q8WZ82 227 aa3.74□□□□□ -1.81
VPS50-216ENST00000484954 NPIPB3Q92617 1050 aa3.74□□□□□ -1.81
VPS50-216ENST00000484954 SLC25A28Q96A46 364 aa3.74□□□□□ -1.81
VPS50-216ENST00000484954 EME1Q96AY2 570 aa3.74□□□□□ -1.81
VPS50-216ENST00000484954 RIPOR3Q96MK2 946 aa3.74□□□□□ -1.81
VPS50-216ENST00000484954 PIMREGQ9BSJ6 248 aa3.74□□□□□ -1.81
VPS50-216ENST00000484954 TTLL2Q9BWV7 592 aa3.74□□□□□ -1.81
VPS50-216ENST00000484954 FAM234AQ9H0X4 552 aa3.74□□□□□ -1.81
VPS50-216ENST00000484954 EPS8L2Q9H6S3 715 aa3.74□□□□□ -1.81
VPS50-216ENST00000484954 RXFP3Q9NSD7 469 aa3.74□□□□□ -1.81
VPS50-216ENST00000484954 B3GNT3Q9Y2A9 372 aa3.74□□□□□ -1.81
VPS50-216ENST00000484954 PCDHB7Q9Y5E2 793 aa3.74□□□□□ -1.81
VPS50-216ENST00000484954 TMEM272A0A1B0GTI8 110 aa3.73□□□□□ -1.81
VPS50-216ENST00000484954 TTC34A8MYJ7 566 aa3.73□□□□□ -1.81
VPS50-216ENST00000484954 RASA4BC9J798 803 aa3.73□□□□□ -1.81
VPS50-216ENST00000484954 NPC1O15118 1278 aa3.73□□□□□ -1.81
VPS50-216ENST00000484954 RASA4O43374 803 aa3.73□□□□□ -1.81
VPS50-216ENST00000484954 ATG13O75143 517 aa3.73□□□□□ -1.81
VPS50-216ENST00000484954 TULP3O75386 442 aa3.73□□□□□ -1.81
VPS50-216ENST00000484954 FGF18O76093 207 aa3.73□□□□□ -1.81
VPS50-216ENST00000484954 EPN2O95208 641 aa3.73□□□□□ -1.81
VPS50-216ENST00000484954 WNT1P04628 370 aa3.73□□□□□ -1.81
VPS50-216ENST00000484954 SLC3A2P08195 630 aaKnown RBP3.73□□□□□ -1.81
VPS50-216ENST00000484954 ITGA5P08648 1049 aa3.73□□□□□ -1.81
VPS50-216ENST00000484954 MMP8P22894 467 aa3.73□□□□□ -1.81
VPS50-216ENST00000484954 EEF1GP26641 437 aaKnown RBP3.73□□□□□ -1.81
VPS50-216ENST00000484954 SLC8A1P32418 973 aa3.73□□□□□ -1.81
VPS50-216ENST00000484954 GNALP38405 381 aa3.73□□□□□ -1.81
VPS50-216ENST00000484954 SLC12A2P55011 1212 aa3.73□□□□□ -1.81
VPS50-216ENST00000484954 NSUN2Q08J23 767 aaKnown RBP eCLIP3.73□□□□□ -1.81
VPS50-216ENST00000484954 GRM4Q14833 912 aa3.73□□□□□ -1.81
VPS50-216ENST00000484954 ASPHD1Q5U4P2 390 aa3.73□□□□□ -1.81
VPS50-216ENST00000484954 ZNF474Q6S9Z5 364 aaPredicted RBP3.73□□□□□ -1.81
VPS50-216ENST00000484954 KSR2Q6VAB6 950 aa3.73□□□□□ -1.81
VPS50-216ENST00000484954 ADGRF4Q8IZF3 695 aa3.73□□□□□ -1.81
VPS50-216ENST00000484954 BCAS4Q8TDM0 211 aa3.73□□□□□ -1.81
VPS50-216ENST00000484954 IPO4Q8TEX9 1081 aaKnown RBP3.73□□□□□ -1.81
VPS50-216ENST00000484954 SLC22A17Q8WUG5 538 aa3.73□□□□□ -1.81
VPS50-216ENST00000484954 GLMPQ8WWB7 406 aa3.73□□□□□ -1.81
VPS50-216ENST00000484954 KIAA1191Q96A73 305 aa3.73□□□□□ -1.81
VPS50-216ENST00000484954 AAMDCQ9H7C9 122 aa3.73□□□□□ -1.81
VPS50-216ENST00000484954 THSD1Q9NS62 852 aa3.73□□□□□ -1.81
VPS50-216ENST00000484954 PCDHA12Q9UN75 941 aa3.73□□□□□ -1.81
VPS50-216ENST00000484954 DTNAQ9Y4J8 743 aa3.73□□□□□ -1.81
VPS50-216ENST00000484954 LRP12Q9Y561 859 aa3.73□□□□□ -1.81
VPS50-216ENST00000484954 PCDHGB2Q9Y5G2 931 aa3.73□□□□□ -1.81
VPS50-216ENST00000484954 IGLV5-39A0A0G2JS06 123 aa3.72□□□□□ -1.81
VPS50-216ENST00000484954 GXYLT2A0PJZ3 443 aa3.72□□□□□ -1.81
VPS50-216ENST00000484954 A6NNC1 897 aa3.72□□□□□ -1.81
VPS50-216ENST00000484954 PODXLO00592 558 aa3.72□□□□□ -1.81
VPS50-216ENST00000484954 IDEP14735 1019 aa3.72□□□□□ -1.81
VPS50-216ENST00000484954 TFEBP19484 476 aa3.72□□□□□ -1.81
VPS50-216ENST00000484954 MPEG1Q2M385 716 aa3.72□□□□□ -1.81
VPS50-216ENST00000484954 ZNF549Q6P9A3 640 aa3.72□□□□□ -1.81
VPS50-216ENST00000484954 KRT27Q7Z3Y8 459 aa3.72□□□□□ -1.81
VPS50-216ENST00000484954 PIM3Q86V86 326 aa3.72□□□□□ -1.81
VPS50-216ENST00000484954 RASGRP3Q8IV61 690 aa3.72□□□□□ -1.81
VPS50-216ENST00000484954 UEVLDQ8IX04 471 aa3.72□□□□□ -1.81
VPS50-216ENST00000484954 OR2C3Q8N628 320 aa3.72□□□□□ -1.81
VPS50-216ENST00000484954 MPLKIPQ8TAP9 179 aa3.72□□□□□ -1.81
VPS50-216ENST00000484954 ASB5Q8WWX0 329 aa3.72□□□□□ -1.81
VPS50-216ENST00000484954 BRI3BPQ8WY22 251 aa3.72□□□□□ -1.81
VPS50-216ENST00000484954 ZNF566Q969W8 418 aa3.72□□□□□ -1.81
VPS50-216ENST00000484954 ZNF347Q96SE7 839 aa3.72□□□□□ -1.81
VPS50-216ENST00000484954 EIF3CQ99613 913 aaKnown RBP3.72□□□□□ -1.81
VPS50-216ENST00000484954 NUDT22Q9BRQ3 303 aa3.72□□□□□ -1.81
VPS50-216ENST00000484954 PAPOLBQ9NRJ5 636 aaKnown RBP3.72□□□□□ -1.81
VPS50-216ENST00000484954 IGSF9Q9P2J2 1179 aa3.72□□□□□ -1.81
VPS50-216ENST00000484954 UTS2RQ9UKP6 389 aa3.72□□□□□ -1.81
VPS50-216ENST00000484954 AGO2Q9UKV8 859 aaKnown RBP3.72□□□□□ -1.81
VPS50-216ENST00000484954 SPATA31A5Q5VU36 1347 aa3.71□□□□□ -1.81
VPS50-216ENST00000484954 EMSYQ7Z589 1322 aa3.71□□□□□ -1.81
VPS50-216ENST00000484954 SPATA31A7Q8IWB4 1347 aa3.71□□□□□ -1.81
VPS50-216ENST00000484954 IGKV2D-30A0A075B6S6 120 aa3.71□□□□□ -1.82
VPS50-216ENST00000484954 F8W810 466 aa3.71□□□□□ -1.82
VPS50-216ENST00000484954 KIF3BO15066 747 aa3.71□□□□□ -1.82
VPS50-216ENST00000484954 CER1O95813 267 aa3.71□□□□□ -1.82
VPS50-216ENST00000484954 ENO1P06733 434 aaKnown RBP3.71□□□□□ -1.82
VPS50-216ENST00000484954 KLRK1P26718 216 aa3.71□□□□□ -1.82
VPS50-216ENST00000484954 HSPA7P48741 367 aa3.71□□□□□ -1.82
VPS50-216ENST00000484954 THBS3P49746 956 aa3.71□□□□□ -1.82
VPS50-216ENST00000484954 SLC37A1P57057 533 aa3.71□□□□□ -1.82
VPS50-216ENST00000484954 RAB30Q15771 203 aa3.71□□□□□ -1.82
VPS50-216ENST00000484954 SMTNL2Q2TAL5 461 aa3.71□□□□□ -1.82
VPS50-216ENST00000484954 ANXA2RQ3ZCQ2 193 aa3.71□□□□□ -1.82
VPS50-216ENST00000484954 IL31Q6EBC2 164 aa3.71□□□□□ -1.82
VPS50-216ENST00000484954 FBXO38Q6PIJ6 1188 aa3.71□□□□□ -1.82
VPS50-216ENST00000484954 RFX8Q6ZV50 586 aa3.71□□□□□ -1.82
VPS50-216ENST00000484954 EXD3Q8N9H8 876 aa3.71□□□□□ -1.82
VPS50-216ENST00000484954 SLC44A5Q8NCS7 719 aa3.71□□□□□ -1.82
VPS50-216ENST00000484954 ADAMTS15Q8TE58 950 aa3.71□□□□□ -1.82
VPS50-216ENST00000484954 ZFPM2Q8WW38 1151 aa3.71□□□□□ -1.82
VPS50-216ENST00000484954 NLRP4Q96MN2 994 aa3.71□□□□□ -1.82
VPS50-216ENST00000484954 MLXIPQ9HAP2 919 aa3.71□□□□□ -1.82
VPS50-216ENST00000484954 KCNK9Q9NPC2 374 aa3.71□□□□□ -1.82
VPS50-216ENST00000484954 FBXO28Q9NVF7 368 aa3.71□□□□□ -1.82
VPS50-216ENST00000484954 PHTF1Q9UMS5 762 aa3.71□□□□□ -1.82
VPS50-216ENST00000484954 LOC105369274A0A096LPK9 316 aa3.7□□□□□ -1.82
VPS50-216ENST00000484954 KIR2DS5A0A0G2JLQ3 304 aa3.7□□□□□ -1.82
VPS50-216ENST00000484954 LOC102723532A0A0G2JNH3 316 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms