RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.25■□□□□ 0.35
CTSA-207ENST00000484855 MYO18AQ92614 2054 aaKnown RBP17.25■□□□□ 0.35
CTSA-207ENST00000484855 ALOX15BO15296 676 aa17.25■□□□□ 0.35
CTSA-207ENST00000484855 EIF3HO15372 352 aaKnown RBP eCLIP17.25■□□□□ 0.35
CTSA-207ENST00000484855 BANF1O75531 89 aa17.25■□□□□ 0.35
CTSA-207ENST00000484855 GCATO75600 419 aa17.25■□□□□ 0.35
CTSA-207ENST00000484855 RTN3O95197 1032 aaPredicted RBP17.25■□□□□ 0.35
CTSA-207ENST00000484855 VNN2O95498 520 aa17.25■□□□□ 0.35
CTSA-207ENST00000484855 YWHAQP27348 245 aa17.25■□□□□ 0.35
CTSA-207ENST00000484855 CCR1P32246 355 aa17.25■□□□□ 0.35
CTSA-207ENST00000484855 SKOR1P84550 965 aa17.25■□□□□ 0.35
CTSA-207ENST00000484855 AP1B1Q10567 949 aa17.25■□□□□ 0.35
CTSA-207ENST00000484855 FNBP1LQ5T0N5 605 aa17.25■□□□□ 0.35
CTSA-207ENST00000484855 FAXCQ5TGI0 409 aa17.25■□□□□ 0.35
CTSA-207ENST00000484855 CCDC13Q8IYE1 715 aa17.25■□□□□ 0.35
CTSA-207ENST00000484855 PDIK1LQ8N165 341 aa17.25■□□□□ 0.35
CTSA-207ENST00000484855 FBXO22Q8NEZ5 403 aa17.25■□□□□ 0.35
CTSA-207ENST00000484855 FBXO32Q969P5 355 aa17.25■□□□□ 0.35
CTSA-207ENST00000484855 TLCD1Q96CP7 247 aa17.25■□□□□ 0.35
CTSA-207ENST00000484855 IGSF21Q96ID5 467 aa17.25■□□□□ 0.35
CTSA-207ENST00000484855 SERPINB11Q96P15 392 aa17.25■□□□□ 0.35
CTSA-207ENST00000484855 OSBPL2Q9H1P3 480 aa17.25■□□□□ 0.35
CTSA-207ENST00000484855 CRISPLD1Q9H336 500 aa17.25■□□□□ 0.35
CTSA-207ENST00000484855 A0A087WUV0 522 aaPredicted RBP17.24■□□□□ 0.35
CTSA-207ENST00000484855 C5orf60A6NFR6 353 aa17.24■□□□□ 0.35
CTSA-207ENST00000484855 LRIG2O94898 1065 aa17.24■□□□□ 0.35
CTSA-207ENST00000484855 IVLP07476 585 aa17.24■□□□□ 0.35
CTSA-207ENST00000484855 HAPLN1P10915 354 aaPredicted RBP17.24■□□□□ 0.35
CTSA-207ENST00000484855 PRKD1Q15139 912 aaPredicted RBP17.24■□□□□ 0.35
CTSA-207ENST00000484855 PSMD5Q16401 504 aa17.24■□□□□ 0.35
CTSA-207ENST00000484855 SYCP2LQ5T4T6 812 aa17.24■□□□□ 0.35
CTSA-207ENST00000484855 PPP1R21Q6ZMI0 780 aa17.24■□□□□ 0.35
CTSA-207ENST00000484855 ARFGAP2Q8N6H7 521 aa17.24■□□□□ 0.35
CTSA-207ENST00000484855 NUP205Q92621 2012 aa17.24■□□□□ 0.35
CTSA-207ENST00000484855 TOP1MTQ969P6 601 aa17.24■□□□□ 0.35
CTSA-207ENST00000484855 FERMT1Q9BQL6 677 aa17.24■□□□□ 0.35
CTSA-207ENST00000484855 IL37Q9NZH6 218 aa17.24■□□□□ 0.35
CTSA-207ENST00000484855 MTRRQ9UBK8 725 aa17.24■□□□□ 0.35
CTSA-207ENST00000484855 KIAA1671Q9BY89 1806 aa17.24■□□□□ 0.35
CTSA-207ENST00000484855 KIAA0100Q14667 2235 aaKnown RBP17.24■□□□□ 0.35
CTSA-207ENST00000484855 E7ESA3 106 aa17.23■□□□□ 0.35
CTSA-207ENST00000484855 EFEMP2O95967 443 aa17.23■□□□□ 0.35
CTSA-207ENST00000484855 TIMP1P01033 207 aa17.23■□□□□ 0.35
CTSA-207ENST00000484855 EPHB2P29323 1055 aa17.23■□□□□ 0.35
CTSA-207ENST00000484855 DUSP4Q13115 394 aa17.23■□□□□ 0.35
CTSA-207ENST00000484855 MSS51Q4VC12 460 aa17.23■□□□□ 0.35
CTSA-207ENST00000484855 MFSD5Q6N075 450 aa17.23■□□□□ 0.35
CTSA-207ENST00000484855 FAM117BQ6P1L5 589 aa17.23■□□□□ 0.35
CTSA-207ENST00000484855 ARHGEF18Q6ZSZ5 1173 aa17.23■□□□□ 0.35
CTSA-207ENST00000484855 ANKMY2Q8IV38 441 aa17.23■□□□□ 0.35
CTSA-207ENST00000484855 VPS52Q8N1B4 723 aa17.23■□□□□ 0.35
CTSA-207ENST00000484855 CCNYQ8ND76 341 aa17.23■□□□□ 0.35
CTSA-207ENST00000484855 SPATA17Q96L03 361 aa17.23■□□□□ 0.35
CTSA-207ENST00000484855 SERPINB12Q96P63 405 aa17.23■□□□□ 0.35
CTSA-207ENST00000484855 HAPLN3Q96S86 360 aa17.23■□□□□ 0.35
CTSA-207ENST00000484855 CCDC77Q9BR77 488 aa17.23■□□□□ 0.35
CTSA-207ENST00000484855 VN1R3Q9BXE9 311 aa17.23■□□□□ 0.35
CTSA-207ENST00000484855 STMN4Q9H169 189 aaPredicted RBP17.23■□□□□ 0.35
CTSA-207ENST00000484855 PRDM12Q9H4Q4 367 aa17.23■□□□□ 0.35
CTSA-207ENST00000484855 VPS37BQ9H9H4 285 aa17.23■□□□□ 0.35
CTSA-207ENST00000484855 ETNK1Q9HBU6 452 aa17.23■□□□□ 0.35
CTSA-207ENST00000484855 RAD54BQ9Y620 910 aa17.23■□□□□ 0.35
CTSA-207ENST00000484855 PTPRSQ13332 1948 aa17.23■□□□□ 0.35
CTSA-207ENST00000484855 FAM92AA1XBS5 289 aa17.23■□□□□ 0.35
CTSA-207ENST00000484855 STK10O94804 968 aaKnown RBP17.23■□□□□ 0.35
CTSA-207ENST00000484855 AGTP01019 485 aa17.23■□□□□ 0.35
CTSA-207ENST00000484855 HSPA8P11142 646 aaKnown RBP17.23■□□□□ 0.35
CTSA-207ENST00000484855 CSF2RAP15509 400 aa17.23■□□□□ 0.35
CTSA-207ENST00000484855 ITGB8P26012 769 aa17.23■□□□□ 0.35
CTSA-207ENST00000484855 GLUD2P49448 558 aa17.23■□□□□ 0.35
CTSA-207ENST00000484855 DEFB103AP81534 67 aa17.23■□□□□ 0.35
CTSA-207ENST00000484855 AUHQ13825 339 aaKnown RBP17.23■□□□□ 0.35
CTSA-207ENST00000484855 PPP2R5DQ14738 602 aa17.23■□□□□ 0.35
CTSA-207ENST00000484855 STAT4Q14765 748 aa17.23■□□□□ 0.35
CTSA-207ENST00000484855 BBS9Q3SYG4 887 aa17.23■□□□□ 0.35
CTSA-207ENST00000484855 EMC10Q5UCC4 262 aa17.23■□□□□ 0.35
CTSA-207ENST00000484855 MSANTD2Q6P1R3 559 aa17.23■□□□□ 0.35
CTSA-207ENST00000484855 TMCO2Q7Z6W1 182 aaPredicted RBP17.23■□□□□ 0.35
CTSA-207ENST00000484855 RNF168Q8IYW5 571 aaPredicted RBP17.23■□□□□ 0.35
CTSA-207ENST00000484855 CAPS2Q9BXY5 557 aa17.23■□□□□ 0.35
CTSA-207ENST00000484855 SIK2Q9H0K1 926 aa17.23■□□□□ 0.35
CTSA-207ENST00000484855 NR2E3Q9Y5X4 410 aa17.23■□□□□ 0.35
CTSA-207ENST00000484855 A0A0A0MRY4 1105 aa17.22■□□□□ 0.35
CTSA-207ENST00000484855 WDR27A2RRH5 827 aa17.22■□□□□ 0.35
CTSA-207ENST00000484855 TRIM43BA6NCK2 446 aa17.22■□□□□ 0.35
CTSA-207ENST00000484855 PAGE1O75459 146 aa17.22■□□□□ 0.35
CTSA-207ENST00000484855 TCEA3O75764 348 aa17.22■□□□□ 0.35
CTSA-207ENST00000484855 APRTP07741 180 aa17.22■□□□□ 0.35
CTSA-207ENST00000484855 CAPN2P17655 700 aa17.22■□□□□ 0.35
CTSA-207ENST00000484855 SERPINB6P35237 376 aa17.22■□□□□ 0.35
CTSA-207ENST00000484855 RPL10AP62906 217 aaKnown RBP17.22■□□□□ 0.35
CTSA-207ENST00000484855 PPP2R2AP63151 447 aa17.22■□□□□ 0.35
CTSA-207ENST00000484855 PKN2Q16513 984 aaKnown RBP17.22■□□□□ 0.35
CTSA-207ENST00000484855 SLC8B1Q6J4K2 584 aa17.22■□□□□ 0.35
CTSA-207ENST00000484855 KIAA1841Q6NSI8 718 aa17.22■□□□□ 0.35
CTSA-207ENST00000484855 CAPN12Q6ZSI9 719 aa17.22■□□□□ 0.35
CTSA-207ENST00000484855 TP53INP2Q8IXH6 220 aa17.22■□□□□ 0.35
CTSA-207ENST00000484855 NPWQ8N729 165 aa17.22■□□□□ 0.35
CTSA-207ENST00000484855 PYROXD1Q8WU10 500 aa17.22■□□□□ 0.35
CTSA-207ENST00000484855 TRIM43Q96BQ3 446 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms