RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 SLC9A4Q6AI14 798 aa21.15■□□□□ 0.98
VCPKMT-203ENST00000484763 RFX8Q6ZV50 586 aa21.15■□□□□ 0.98
VCPKMT-203ENST00000484763 GRASPQ7Z6J2 395 aaPredicted RBP21.15■□□□□ 0.98
VCPKMT-203ENST00000484763 PQLC3Q8N755 202 aa21.15■□□□□ 0.98
VCPKMT-203ENST00000484763 MAB21L3Q8N8X9 362 aa21.15■□□□□ 0.98
VCPKMT-203ENST00000484763 C1orf74Q96LT6 269 aa21.15■□□□□ 0.98
VCPKMT-203ENST00000484763 DDX47Q9H0S4 455 aaKnown RBP21.15■□□□□ 0.98
VCPKMT-203ENST00000484763 ARHGEF4Q9NR80 690 aa21.15■□□□□ 0.98
VCPKMT-203ENST00000484763 SNX10Q9Y5X0 201 aa21.15■□□□□ 0.98
VCPKMT-203ENST00000484763 HS3ST4Q9Y661 456 aa21.15■□□□□ 0.98
VCPKMT-203ENST00000484763 HELZP42694 1942 aaKnown RBP21.15■□□□□ 0.98
VCPKMT-203ENST00000484763 TRAV19A0A0A6YYK7 116 aa21.15■□□□□ 0.98
VCPKMT-203ENST00000484763 APOC4-APOC2K7ER74 178 aa21.15■□□□□ 0.98
VCPKMT-203ENST00000484763 APOC2P02655 101 aa21.15■□□□□ 0.98
VCPKMT-203ENST00000484763 HTR7P34969 479 aa21.15■□□□□ 0.98
VCPKMT-203ENST00000484763 GGCXP38435 758 aa21.15■□□□□ 0.98
VCPKMT-203ENST00000484763 HARS2P49590 506 aaKnown RBP21.15■□□□□ 0.98
VCPKMT-203ENST00000484763 NRG1Q02297 640 aaPredicted RBP21.15■□□□□ 0.98
VCPKMT-203ENST00000484763 DPYSQ14117 519 aa21.15■□□□□ 0.98
VCPKMT-203ENST00000484763 PIK3R6Q5UE93 754 aa21.15■□□□□ 0.98
VCPKMT-203ENST00000484763 TMEM184AQ6ZMB5 413 aa21.15■□□□□ 0.98
VCPKMT-203ENST00000484763 KLHL7Q8IXQ5 586 aa21.15■□□□□ 0.98
VCPKMT-203ENST00000484763 EFHBQ8N7U6 833 aa21.15■□□□□ 0.98
VCPKMT-203ENST00000484763 C12orf76Q8N812 135 aaPredicted RBP21.15■□□□□ 0.98
VCPKMT-203ENST00000484763 TTC13Q8NBP0 860 aa21.15■□□□□ 0.98
VCPKMT-203ENST00000484763 TCEAL4Q96EI5 215 aa21.15■□□□□ 0.98
VCPKMT-203ENST00000484763 CYP2S1Q96SQ9 504 aa21.15■□□□□ 0.98
VCPKMT-203ENST00000484763 KRT12Q99456 494 aa21.15■□□□□ 0.98
VCPKMT-203ENST00000484763 PRDM12Q9H4Q4 367 aa21.15■□□□□ 0.98
VCPKMT-203ENST00000484763 R3HDM2Q9Y2K5 976 aaKnown RBP21.15■□□□□ 0.98
VCPKMT-203ENST00000484763 NRG2O14511 850 aaPredicted RBP21.14■□□□□ 0.97
VCPKMT-203ENST00000484763 STC2O76061 302 aa21.14■□□□□ 0.97
VCPKMT-203ENST00000484763 LRIG2O94898 1065 aa21.14■□□□□ 0.97
VCPKMT-203ENST00000484763 CKMP06732 381 aa21.14■□□□□ 0.97
VCPKMT-203ENST00000484763 ZFXP17010 805 aaPredicted RBP21.14■□□□□ 0.97
VCPKMT-203ENST00000484763 TGM2P21980 687 aa21.14■□□□□ 0.97
VCPKMT-203ENST00000484763 CHRNA3P32297 505 aa21.14■□□□□ 0.97
VCPKMT-203ENST00000484763 SLC7A9P82251 487 aa21.14■□□□□ 0.97
VCPKMT-203ENST00000484763 SLC5A9Q2M3M2 681 aa21.14■□□□□ 0.97
VCPKMT-203ENST00000484763 PRSS36Q5K4E3 855 aa21.14■□□□□ 0.97
VCPKMT-203ENST00000484763 STXBP5Q5T5C0 1151 aa21.14■□□□□ 0.97
VCPKMT-203ENST00000484763 TMC5Q6UXY8 1006 aa21.14■□□□□ 0.97
VCPKMT-203ENST00000484763 PLD5Q8N7P1 536 aa21.14■□□□□ 0.97
VCPKMT-203ENST00000484763 C1orf54Q8WWF1 131 aa21.14■□□□□ 0.97
VCPKMT-203ENST00000484763 MAGOHBQ96A72 148 aaKnown RBP21.14■□□□□ 0.97
VCPKMT-203ENST00000484763 ZFRQ96KR1 1074 aaKnown RBP21.14■□□□□ 0.97
VCPKMT-203ENST00000484763 DCLK3Q9C098 648 aa21.14■□□□□ 0.97
VCPKMT-203ENST00000484763 LRRC19Q9H756 370 aa21.14■□□□□ 0.97
VCPKMT-203ENST00000484763 C2orf16Q68DN1 1984 aa21.14■□□□□ 0.97
VCPKMT-203ENST00000484763 SOBPA7XYQ1 873 aa21.13■□□□□ 0.97
VCPKMT-203ENST00000484763 ZNF197O14709 1029 aa21.13■□□□□ 0.97
VCPKMT-203ENST00000484763 DAPK3O43293 454 aa21.13■□□□□ 0.97
VCPKMT-203ENST00000484763 MOSPD3O75425 235 aa21.13■□□□□ 0.97
VCPKMT-203ENST00000484763 GLP2RO95838 553 aa21.13■□□□□ 0.97
VCPKMT-203ENST00000484763 MLLT6P55198 1093 aaPredicted RBP21.13■□□□□ 0.97
VCPKMT-203ENST00000484763 NTHL1P78549 312 aa21.13■□□□□ 0.97
VCPKMT-203ENST00000484763 TEAD2Q15562 447 aa21.13■□□□□ 0.97
VCPKMT-203ENST00000484763 CCNG2Q16589 344 aa21.13■□□□□ 0.97
VCPKMT-203ENST00000484763 MS4A13Q5J8X5 152 aa21.13■□□□□ 0.97
VCPKMT-203ENST00000484763 GPR158Q5T848 1215 aa21.13■□□□□ 0.97
VCPKMT-203ENST00000484763 ATG4AQ8WYN0 398 aa21.13■□□□□ 0.97
VCPKMT-203ENST00000484763 UBXN4Q92575 508 aa21.13■□□□□ 0.97
VCPKMT-203ENST00000484763 HAUS1Q96CS2 278 aa21.13■□□□□ 0.97
VCPKMT-203ENST00000484763 FRMD8P1Q9BZ68 369 aaPredicted RBP21.13■□□□□ 0.97
VCPKMT-203ENST00000484763 TTYH1Q9H313 450 aaPredicted RBP21.13■□□□□ 0.97
VCPKMT-203ENST00000484763 SLITRK6Q9H5Y7 841 aa21.13■□□□□ 0.97
VCPKMT-203ENST00000484763 GKN1Q9NS71 199 aa21.13■□□□□ 0.97
VCPKMT-203ENST00000484763 SMPD4Q9NXE4 827 aa21.13■□□□□ 0.97
VCPKMT-203ENST00000484763 CPQQ9Y646 472 aa21.13■□□□□ 0.97
VCPKMT-203ENST00000484763 TRIOBPQ9H2D6 2365 aa21.13■□□□□ 0.97
VCPKMT-203ENST00000484763 IRF1P10914 325 aa21.13■□□□□ 0.97
VCPKMT-203ENST00000484763 AMPD1P23109 780 aa21.13■□□□□ 0.97
VCPKMT-203ENST00000484763 SLC11A2P49281 568 aa21.13■□□□□ 0.97
VCPKMT-203ENST00000484763 FNTAP49354 379 aa21.13■□□□□ 0.97
VCPKMT-203ENST00000484763 MANEALQ5VSG8 457 aa21.13■□□□□ 0.97
VCPKMT-203ENST00000484763 C8orf74Q6P047 294 aa21.13■□□□□ 0.97
VCPKMT-203ENST00000484763 AZIN2Q96A70 460 aa21.13■□□□□ 0.97
VCPKMT-203ENST00000484763 TBC1D31Q96DN5 1066 aa21.13■□□□□ 0.97
VCPKMT-203ENST00000484763 TASP1Q9H6P5 420 aa21.13■□□□□ 0.97
VCPKMT-203ENST00000484763 STIM2Q9P246 746 aa21.13■□□□□ 0.97
VCPKMT-203ENST00000484763 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.13■□□□□ 0.97
VCPKMT-203ENST00000484763 ZMYM5Q9UJ78 669 aa21.13■□□□□ 0.97
VCPKMT-203ENST00000484763 V9GYY5 206 aaPredicted RBP21.13■□□□□ 0.97
VCPKMT-203ENST00000484763 EPHB2P29323 1055 aa21.12■□□□□ 0.97
VCPKMT-203ENST00000484763 CORO1AP31146 461 aaKnown RBP21.12■□□□□ 0.97
VCPKMT-203ENST00000484763 HOXC13P31276 330 aa21.12■□□□□ 0.97
VCPKMT-203ENST00000484763 OTUD4Q01804 1114 aaKnown RBP21.12■□□□□ 0.97
VCPKMT-203ENST00000484763 NCBP2-AS2Q69YL0 99 aa21.12■□□□□ 0.97
VCPKMT-203ENST00000484763 CCDC70Q6NSX1 233 aa21.12■□□□□ 0.97
VCPKMT-203ENST00000484763 ACTL9Q8TC94 416 aa21.12■□□□□ 0.97
VCPKMT-203ENST00000484763 P3H4Q92791 437 aa21.12■□□□□ 0.97
VCPKMT-203ENST00000484763 RUNDC3BQ96NL0 473 aa21.12■□□□□ 0.97
VCPKMT-203ENST00000484763 SLC46A2Q9BY10 475 aa21.12■□□□□ 0.97
VCPKMT-203ENST00000484763 NEU3Q9UQ49 428 aa21.12■□□□□ 0.97
VCPKMT-203ENST00000484763 E9PAM4 449 aa21.11■□□□□ 0.97
VCPKMT-203ENST00000484763 LINC01565O15544 149 aa21.11■□□□□ 0.97
VCPKMT-203ENST00000484763 CTIFO43310 598 aaKnown RBP21.11■□□□□ 0.97
VCPKMT-203ENST00000484763 ACSL4O60488 711 aa21.11■□□□□ 0.97
VCPKMT-203ENST00000484763 PECAM1P16284 738 aaPredicted RBP21.11■□□□□ 0.97
VCPKMT-203ENST00000484763 COILP38432 576 aaPredicted RBP21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms