RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 RILPQ96NA2 401 aa20.28■□□□□ 0.84
LIMS2-215ENST00000484252 DPEP3Q9H4B8 488 aa20.28■□□□□ 0.84
LIMS2-215ENST00000484252 FAM96AQ9H5X1 160 aa20.28■□□□□ 0.84
LIMS2-215ENST00000484252 FZD10Q9ULW2 581 aa20.28■□□□□ 0.84
LIMS2-215ENST00000484252 LRCH1Q9Y2L9 728 aa20.28■□□□□ 0.84
LIMS2-215ENST00000484252 SF3B1O75533 1304 aaKnown RBP eCLIP20.27■□□□□ 0.84
LIMS2-215ENST00000484252 TM7SF2O76062 418 aa20.27■□□□□ 0.84
LIMS2-215ENST00000484252 KITP10721 976 aa20.27■□□□□ 0.84
LIMS2-215ENST00000484252 ADORA2BP29275 332 aa20.27■□□□□ 0.84
LIMS2-215ENST00000484252 SESN3P58005 492 aa20.27■□□□□ 0.84
LIMS2-215ENST00000484252 CDC42EP1Q00587 391 aa20.27■□□□□ 0.84
LIMS2-215ENST00000484252 TRMT5Q32P41 509 aaKnown RBP20.27■□□□□ 0.84
LIMS2-215ENST00000484252 MARCH8Q5T0T0 291 aa20.27■□□□□ 0.84
LIMS2-215ENST00000484252 IRGCQ6NXR0 463 aa20.27■□□□□ 0.84
LIMS2-215ENST00000484252 CASC4Q6P4E1 433 aa20.27■□□□□ 0.84
LIMS2-215ENST00000484252 SCUBE1Q8IWY4 988 aa20.27■□□□□ 0.84
LIMS2-215ENST00000484252 COLGALT1Q8NBJ5 622 aa20.27■□□□□ 0.84
LIMS2-215ENST00000484252 RBM15BQ8NDT2 890 aaKnown RBP20.27■□□□□ 0.84
LIMS2-215ENST00000484252 FAM161BQ96MY7 647 aa20.27■□□□□ 0.84
LIMS2-215ENST00000484252 C20orf27Q9GZN8 174 aa20.27■□□□□ 0.84
LIMS2-215ENST00000484252 ZNF395Q9H8N7 513 aaPredicted RBP20.27■□□□□ 0.84
LIMS2-215ENST00000484252 MARCOQ9UEW3 520 aaPredicted RBP20.27■□□□□ 0.84
LIMS2-215ENST00000484252 ANGPTL2Q9UKU9 493 aa20.27■□□□□ 0.84
LIMS2-215ENST00000484252 UBQLN1Q9UMX0 589 aaKnown RBP20.27■□□□□ 0.84
LIMS2-215ENST00000484252 PLA2G4CQ9UP65 541 aa20.27■□□□□ 0.84
LIMS2-215ENST00000484252 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.26■□□□□ 0.83
LIMS2-215ENST00000484252 DCAF8L1A6NGE4 600 aa20.26■□□□□ 0.83
LIMS2-215ENST00000484252 TBX10O75333 385 aa20.26■□□□□ 0.83
LIMS2-215ENST00000484252 CD4P01730 458 aa20.26■□□□□ 0.83
LIMS2-215ENST00000484252 GOT1P17174 413 aa20.26■□□□□ 0.83
LIMS2-215ENST00000484252 AOC1P19801 751 aa20.26■□□□□ 0.83
LIMS2-215ENST00000484252 HOXA11P31270 313 aaPredicted RBP20.26■□□□□ 0.83
LIMS2-215ENST00000484252 MATKP42679 507 aa20.26■□□□□ 0.83
LIMS2-215ENST00000484252 CPA2P48052 419 aa20.26■□□□□ 0.83
LIMS2-215ENST00000484252 THOC5Q13769 683 aaKnown RBP20.26■□□□□ 0.83
LIMS2-215ENST00000484252 LBRQ14739 615 aaKnown RBP20.26■□□□□ 0.83
LIMS2-215ENST00000484252 INSCQ1MX18 579 aa20.26■□□□□ 0.83
LIMS2-215ENST00000484252 MBLAC2Q68D91 279 aa20.26■□□□□ 0.83
LIMS2-215ENST00000484252 XPNPEP3Q9NQH7 507 aa20.26■□□□□ 0.83
LIMS2-215ENST00000484252 ETAA1Q9NY74 926 aa20.26■□□□□ 0.83
LIMS2-215ENST00000484252 AHCYL1O43865 530 aa20.26■□□□□ 0.83
LIMS2-215ENST00000484252 GSRP00390 522 aa20.26■□□□□ 0.83
LIMS2-215ENST00000484252 CCDC130P13994 396 aa20.26■□□□□ 0.83
LIMS2-215ENST00000484252 GNL1P36915 607 aaPredicted RBP20.26■□□□□ 0.83
LIMS2-215ENST00000484252 GLUD2P49448 558 aa20.26■□□□□ 0.83
LIMS2-215ENST00000484252 RCN2Q14257 317 aa20.26■□□□□ 0.83
LIMS2-215ENST00000484252 R3HDM1Q15032 1099 aaKnown RBP20.26■□□□□ 0.83
LIMS2-215ENST00000484252 PCBP1Q15365 356 aaKnown RBP eCLIP20.26■□□□□ 0.832e-6■■■■■ 32.7
LIMS2-215ENST00000484252 SLC25A52Q3SY17 297 aa20.26■□□□□ 0.83
LIMS2-215ENST00000484252 ALKAL1Q6UXT8 129 aa20.26■□□□□ 0.83
LIMS2-215ENST00000484252 PIWIL2Q8TC59 973 aaKnown RBP20.26■□□□□ 0.83
LIMS2-215ENST00000484252 NRG4Q8WWG1 115 aa20.26■□□□□ 0.83
LIMS2-215ENST00000484252 SCG3Q8WXD2 468 aaKnown RBP20.26■□□□□ 0.83
LIMS2-215ENST00000484252 C18orf25Q96B23 403 aaPredicted RBP20.26■□□□□ 0.83
LIMS2-215ENST00000484252 ZNF560Q96MR9 790 aa20.26■□□□□ 0.83
LIMS2-215ENST00000484252 CXCL16Q9H2A7 254 aa20.26■□□□□ 0.83
LIMS2-215ENST00000484252 SNX25Q9H3E2 840 aa20.26■□□□□ 0.83
LIMS2-215ENST00000484252 PLIN3O60664 434 aa20.25■□□□□ 0.83
LIMS2-215ENST00000484252 SNUPNO95149 360 aaKnown RBP20.25■□□□□ 0.83
LIMS2-215ENST00000484252 FESP07332 822 aa20.25■□□□□ 0.83
LIMS2-215ENST00000484252 ALDH18A1P54886 795 aaKnown RBP20.25■□□□□ 0.83
LIMS2-215ENST00000484252 PDK1Q15118 436 aa20.25■□□□□ 0.83
LIMS2-215ENST00000484252 FBXO47Q5MNV8 452 aa20.25■□□□□ 0.83
LIMS2-215ENST00000484252 N4BP2L1Q5TBK1 243 aaPredicted RBP20.25■□□□□ 0.83
LIMS2-215ENST00000484252 NOTUMQ6P988 496 aa20.25■□□□□ 0.83
LIMS2-215ENST00000484252 CATSPER4Q7RTX7 472 aa20.25■□□□□ 0.83
LIMS2-215ENST00000484252 KBTBD7Q8WVZ9 684 aa20.25■□□□□ 0.83
LIMS2-215ENST00000484252 OPTNQ96CV9 577 aa20.25■□□□□ 0.83
LIMS2-215ENST00000484252 ADAMTS10Q9H324 1103 aa20.25■□□□□ 0.83
LIMS2-215ENST00000484252 GDAP2Q9NXN4 497 aa20.25■□□□□ 0.83
LIMS2-215ENST00000484252 DNAJB4Q9UDY4 337 aa20.25■□□□□ 0.83
LIMS2-215ENST00000484252 EMCNQ9ULC0 261 aa20.25■□□□□ 0.83
LIMS2-215ENST00000484252 SCN1AP35498 2009 aa20.25■□□□□ 0.83
LIMS2-215ENST00000484252 RNF103O00237 685 aa20.25■□□□□ 0.83
LIMS2-215ENST00000484252 TPP1O14773 563 aa20.25■□□□□ 0.83
LIMS2-215ENST00000484252 KLHL2O95198 593 aa20.25■□□□□ 0.83
LIMS2-215ENST00000484252 ALDOAP04075 364 aaKnown RBP20.25■□□□□ 0.83
LIMS2-215ENST00000484252 SERPINE1P05121 402 aa20.25■□□□□ 0.83
LIMS2-215ENST00000484252 GRK2P25098 689 aa20.25■□□□□ 0.83
LIMS2-215ENST00000484252 PNPLA4P41247 253 aa20.25■□□□□ 0.83
LIMS2-215ENST00000484252 INHBEP58166 350 aa20.25■□□□□ 0.83
LIMS2-215ENST00000484252 CCNA1P78396 465 aa20.25■□□□□ 0.83
LIMS2-215ENST00000484252 CCDC33Q8N5R6 958 aa20.25■□□□□ 0.83
LIMS2-215ENST00000484252 FAM136AQ96C01 138 aa20.25■□□□□ 0.83
LIMS2-215ENST00000484252 TSPAN18Q96SJ8 248 aa20.25■□□□□ 0.83
LIMS2-215ENST00000484252 LPIN3Q9BQK8 851 aa20.25■□□□□ 0.83
LIMS2-215ENST00000484252 MAGEB5Q9BZ81 275 aa20.25■□□□□ 0.83
LIMS2-215ENST00000484252 CPSF2Q9P2I0 782 aaKnown RBP20.25■□□□□ 0.83
LIMS2-215ENST00000484252 RRN3P2A6NIE6 340 aa20.24■□□□□ 0.83
LIMS2-215ENST00000484252 PIRO00625 290 aa20.24■□□□□ 0.83
LIMS2-215ENST00000484252 XPO1O14980 1071 aaKnown RBP20.24■□□□□ 0.83
LIMS2-215ENST00000484252 MAP3K7O43318 606 aa20.24■□□□□ 0.83
LIMS2-215ENST00000484252 MFSD11O43934 449 aa20.24■□□□□ 0.83
LIMS2-215ENST00000484252 DAB1O75553 588 aa20.24■□□□□ 0.83
LIMS2-215ENST00000484252 PDGFRBP09619 1106 aa20.24■□□□□ 0.83
LIMS2-215ENST00000484252 FGF3P11487 239 aaPredicted RBP20.24■□□□□ 0.83
LIMS2-215ENST00000484252 HOXD8P13378 290 aaPredicted RBP20.24■□□□□ 0.83
LIMS2-215ENST00000484252 MGAT1P26572 445 aa20.24■□□□□ 0.83
LIMS2-215ENST00000484252 GARSP41250 739 aaKnown RBP20.24■□□□□ 0.83
LIMS2-215ENST00000484252 ADCYAP1R1P41586 468 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms