RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 MYEOVQ96EZ4 313 aa13.47□□□□□ -0.25
UBR4-213ENST00000483922 SLC6A18Q96N87 628 aa13.47□□□□□ -0.25
UBR4-213ENST00000483922 BTBD1Q9H0C5 482 aa13.47□□□□□ -0.25
UBR4-213ENST00000483922 ABCB8Q9NUT2 735 aa13.47□□□□□ -0.25
UBR4-213ENST00000483922 SERTAD1Q9UHV2 236 aa13.47□□□□□ -0.25
UBR4-213ENST00000483922 STOML2Q9UJZ1 356 aa13.47□□□□□ -0.25
UBR4-213ENST00000483922 PCDHA7Q9UN72 937 aa13.47□□□□□ -0.25
UBR4-213ENST00000483922 ZNF462Q96JM2 2506 aa13.47□□□□□ -0.25
UBR4-213ENST00000483922 SHROOM3Q8TF72 1996 aa13.47□□□□□ -0.25
UBR4-213ENST00000483922 PLXNA2O75051 1894 aa13.46□□□□□ -0.25
UBR4-213ENST00000483922 GOLGA6L7A0A1B0GV03 622 aa13.46□□□□□ -0.25
UBR4-213ENST00000483922 GABBR2O75899 941 aa13.46□□□□□ -0.25
UBR4-213ENST00000483922 CD70P32970 193 aa13.46□□□□□ -0.25
UBR4-213ENST00000483922 PIK3CAP42336 1068 aa13.46□□□□□ -0.25
UBR4-213ENST00000483922 CCT8P50990 548 aa13.46□□□□□ -0.25
UBR4-213ENST00000483922 RAD23BP54727 409 aa13.46□□□□□ -0.25
UBR4-213ENST00000483922 MCCD1P59942 119 aaPredicted RBP13.46□□□□□ -0.25
UBR4-213ENST00000483922 KCNJ12Q14500 433 aa13.46□□□□□ -0.25
UBR4-213ENST00000483922 KMT5BQ4FZB7 885 aa13.46□□□□□ -0.25
UBR4-213ENST00000483922 MPPE1Q53F39 396 aa13.46□□□□□ -0.25
UBR4-213ENST00000483922 CHST9Q7L1S5 443 aa13.46□□□□□ -0.25
UBR4-213ENST00000483922 TADA2BQ86TJ2 420 aa13.46□□□□□ -0.25
UBR4-213ENST00000483922 TMPRSS12Q86WS5 348 aa13.46□□□□□ -0.25
UBR4-213ENST00000483922 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.46□□□□□ -0.25
UBR4-213ENST00000483922 SAP25Q8TEE9 199 aa13.46□□□□□ -0.25
UBR4-213ENST00000483922 UBL7Q96S82 380 aaPredicted RBP13.46□□□□□ -0.25
UBR4-213ENST00000483922 UBXN6Q9BZV1 441 aa13.46□□□□□ -0.25
UBR4-213ENST00000483922 CYP3A43Q9HB55 503 aa13.46□□□□□ -0.25
UBR4-213ENST00000483922 SFMBT1Q9UHJ3 866 aa13.46□□□□□ -0.25
UBR4-213ENST00000483922 A0A1W2PR77 199 aa13.45□□□□□ -0.26
UBR4-213ENST00000483922 PDXKO00764 312 aa13.45□□□□□ -0.26
UBR4-213ENST00000483922 VILLO15195 856 aa13.45□□□□□ -0.26
UBR4-213ENST00000483922 ATXN7O15265 892 aaPredicted RBP13.45□□□□□ -0.26
UBR4-213ENST00000483922 ACTN4O43707 911 aaKnown RBP13.45□□□□□ -0.26
UBR4-213ENST00000483922 CYBBP04839 570 aa13.45□□□□□ -0.26
UBR4-213ENST00000483922 PDIA4P13667 645 aaKnown RBP13.45□□□□□ -0.26
UBR4-213ENST00000483922 ABCG1P45844 678 aa13.45□□□□□ -0.26
UBR4-213ENST00000483922 VAMP7P51809 220 aa13.45□□□□□ -0.26
UBR4-213ENST00000483922 TKTL1P51854 596 aa13.45□□□□□ -0.26
UBR4-213ENST00000483922 GALCP54803 685 aa13.45□□□□□ -0.26
UBR4-213ENST00000483922 TARDBPQ13148 414 aaKnown RBP eCLIP13.45□□□□□ -0.26
UBR4-213ENST00000483922 TEAD4Q15561 434 aa13.45□□□□□ -0.26
UBR4-213ENST00000483922 FNDC3BQ53EP0 1204 aaKnown RBP13.45□□□□□ -0.26
UBR4-213ENST00000483922 RESP18Q5W5W9 173 aa13.45□□□□□ -0.26
UBR4-213ENST00000483922 MBLAC2Q68D91 279 aa13.45□□□□□ -0.26
UBR4-213ENST00000483922 KIAA0895LQ68EN5 471 aa13.45□□□□□ -0.26
UBR4-213ENST00000483922 FMNL3Q8IVF7 1028 aa13.45□□□□□ -0.26
UBR4-213ENST00000483922 GOLGA5Q8TBA6 731 aa13.45□□□□□ -0.26
UBR4-213ENST00000483922 TSC1Q92574 1164 aa13.45□□□□□ -0.26
UBR4-213ENST00000483922 PAGE5Q96GU1 130 aa13.45□□□□□ -0.26
UBR4-213ENST00000483922 MRGPRX3Q96LB0 322 aa13.45□□□□□ -0.26
UBR4-213ENST00000483922 HEXIM2Q96MH2 286 aaKnown RBP13.45□□□□□ -0.26
UBR4-213ENST00000483922 INTS6Q9UL03 887 aaKnown RBP13.45□□□□□ -0.26
UBR4-213ENST00000483922 COL5A1P20908 1838 aaPredicted RBP13.44□□□□□ -0.26
UBR4-213ENST00000483922 A0A1W2PPC4 97 aa13.44□□□□□ -0.26
UBR4-213ENST00000483922 EIF4E1BA6NMX2 242 aaKnown RBP13.44□□□□□ -0.26
UBR4-213ENST00000483922 YJEFN3A6XGL0 299 aa13.44□□□□□ -0.26
UBR4-213ENST00000483922 E7ENQ6 273 aa13.44□□□□□ -0.26
UBR4-213ENST00000483922 E9PAM4 449 aa13.44□□□□□ -0.26
UBR4-213ENST00000483922 ENC1O14682 589 aa13.44□□□□□ -0.26
UBR4-213ENST00000483922 YEATS4O95619 227 aa13.44□□□□□ -0.26
UBR4-213ENST00000483922 PLA2G2AP14555 144 aa13.44□□□□□ -0.26
UBR4-213ENST00000483922 SLC6A4P31645 630 aa13.44□□□□□ -0.26
UBR4-213ENST00000483922 ACADVLP49748 655 aa13.44□□□□□ -0.26
UBR4-213ENST00000483922 SEMG2Q02383 582 aa13.44□□□□□ -0.26
UBR4-213ENST00000483922 C19orf57Q0VDD7 668 aa13.44□□□□□ -0.26
UBR4-213ENST00000483922 BNIP3Q12983 259 aa13.44□□□□□ -0.26
UBR4-213ENST00000483922 FOXD4L6Q3SYB3 417 aaPredicted RBP13.44□□□□□ -0.26
UBR4-213ENST00000483922 CEP135Q66GS9 1140 aa13.44□□□□□ -0.26
UBR4-213ENST00000483922 FBXL19Q6PCT2 694 aa13.44□□□□□ -0.26
UBR4-213ENST00000483922 FOXD4L3Q6VB84 417 aaPredicted RBP13.44□□□□□ -0.26
UBR4-213ENST00000483922 KANSL1Q7Z3B3 1105 aa13.44□□□□□ -0.26
UBR4-213ENST00000483922 ZNF843Q8N446 348 aa13.44□□□□□ -0.26
UBR4-213ENST00000483922 EDEM1Q92611 657 aa13.44□□□□□ -0.26
UBR4-213ENST00000483922 TATDN2Q93075 761 aa13.44□□□□□ -0.26
UBR4-213ENST00000483922 PLD4Q96BZ4 506 aa13.44□□□□□ -0.26
UBR4-213ENST00000483922 TMA16Q96EY4 203 aaKnown RBP13.44□□□□□ -0.26
UBR4-213ENST00000483922 INTS4Q96HW7 963 aaKnown RBP13.44□□□□□ -0.26
UBR4-213ENST00000483922 CDK5RAP1Q96SZ6 601 aaKnown RBP13.44□□□□□ -0.26
UBR4-213ENST00000483922 ELF4Q99607 663 aaPredicted RBP13.44□□□□□ -0.26
UBR4-213ENST00000483922 ULBP1Q9BZM6 244 aa13.44□□□□□ -0.26
UBR4-213ENST00000483922 NIF3L1Q9GZT8 377 aa13.44□□□□□ -0.26
UBR4-213ENST00000483922 RSPH9Q9H1X1 276 aaPredicted RBP13.44□□□□□ -0.26
UBR4-213ENST00000483922 NEUROG2Q9H2A3 272 aa13.44□□□□□ -0.26
UBR4-213ENST00000483922 MAGEF1Q9HAY2 307 aa13.44□□□□□ -0.26
UBR4-213ENST00000483922 SGK2Q9HBY8 427 aa13.44□□□□□ -0.26
UBR4-213ENST00000483922 CISHQ9NSE2 258 aa13.44□□□□□ -0.26
UBR4-213ENST00000483922 FTSJ1Q9UET6 329 aa13.44□□□□□ -0.26
UBR4-213ENST00000483922 GGA2Q9UJY4 613 aa13.44□□□□□ -0.26
UBR4-213ENST00000483922 PLA2G4CQ9UP65 541 aa13.44□□□□□ -0.26
UBR4-213ENST00000483922 TRAF3IP3Q9Y228 551 aa13.44□□□□□ -0.26
UBR4-213ENST00000483922 PTPRQQ9UMZ3 2332 aa13.44□□□□□ -0.26
UBR4-213ENST00000483922 KNTC1P50748 2209 aa13.43□□□□□ -0.26
UBR4-213ENST00000483922 TK2O00142 265 aa13.43□□□□□ -0.26
UBR4-213ENST00000483922 MSI1O43347 362 aaKnown RBP13.43□□□□□ -0.26
UBR4-213ENST00000483922 SIN3BO75182 1162 aa13.43□□□□□ -0.26
UBR4-213ENST00000483922 ZBED1O96006 694 aa13.43□□□□□ -0.26
UBR4-213ENST00000483922 DNTTP04053 509 aa13.43□□□□□ -0.26
UBR4-213ENST00000483922 DLDP09622 509 aaKnown RBP13.43□□□□□ -0.26
UBR4-213ENST00000483922 PABPC1P11940 636 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms