RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 SLC9A7Q96T83 725 aa10.48□□□□□ -0.73
COL12A1-207ENST00000483888 NCKIPSDQ9NZQ3 722 aa10.48□□□□□ -0.73
COL12A1-207ENST00000483888 TBC1D24Q9ULP9 559 aa10.48□□□□□ -0.73
COL12A1-207ENST00000483888 MRPS7Q9Y2R9 242 aaKnown RBP10.48□□□□□ -0.73
COL12A1-207ENST00000483888 ZNF197O14709 1029 aa10.48□□□□□ -0.73
COL12A1-207ENST00000483888 NOL4O94818 638 aa10.48□□□□□ -0.73
COL12A1-207ENST00000483888 EIF2S3LQ2VIR3 472 aaKnown RBP10.48□□□□□ -0.73
COL12A1-207ENST00000483888 TFDP3Q5H9I0 405 aa10.48□□□□□ -0.73
COL12A1-207ENST00000483888 C4orf22Q6V702 233 aa10.48□□□□□ -0.73
COL12A1-207ENST00000483888 PRDM16Q9HAZ2 1276 aa10.48□□□□□ -0.73
COL12A1-207ENST00000483888 TMLHEQ9NVH6 421 aa10.48□□□□□ -0.73
COL12A1-207ENST00000483888 BCORL1Q5H9F3 1711 aa10.48□□□□□ -0.73
COL12A1-207ENST00000483888 A0A0X1KG70 313 aa10.48□□□□□ -0.73
COL12A1-207ENST00000483888 FBP2O00757 339 aa10.48□□□□□ -0.73
COL12A1-207ENST00000483888 ITGA4P13612 1032 aa10.48□□□□□ -0.73
COL12A1-207ENST00000483888 TNK2Q07912 1038 aa10.48□□□□□ -0.73
COL12A1-207ENST00000483888 N4BP2L1Q5TBK1 243 aaPredicted RBP10.48□□□□□ -0.73
COL12A1-207ENST00000483888 TTC23Q5W5X9 447 aa10.48□□□□□ -0.73
COL12A1-207ENST00000483888 SLFN13Q68D06 897 aa10.48□□□□□ -0.73
COL12A1-207ENST00000483888 ANKS3Q6ZW76 656 aa10.48□□□□□ -0.73
COL12A1-207ENST00000483888 ENGASEQ8NFI3 743 aa10.48□□□□□ -0.73
COL12A1-207ENST00000483888 TEKT5Q96M29 485 aa10.48□□□□□ -0.73
COL12A1-207ENST00000483888 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.48□□□□□ -0.73
COL12A1-207ENST00000483888 PRKAB2O43741 272 aa10.48□□□□□ -0.73
COL12A1-207ENST00000483888 A1BGP04217 495 aa10.48□□□□□ -0.73
COL12A1-207ENST00000483888 MTERF2Q49AM1 385 aa10.48□□□□□ -0.73
COL12A1-207ENST00000483888 TRPV1Q8NER1 839 aa10.48□□□□□ -0.73
COL12A1-207ENST00000483888 PLEKHF1Q96S99 279 aa10.48□□□□□ -0.73
COL12A1-207ENST00000483888 RNF112Q9ULX5 631 aa10.48□□□□□ -0.73
COL12A1-207ENST00000483888 GNEQ9Y223 722 aaKnown RBP10.48□□□□□ -0.73
COL12A1-207ENST00000483888 OR6C70A6NIJ9 312 aa10.48□□□□□ -0.73
COL12A1-207ENST00000483888 ANXA6P08133 673 aa10.48□□□□□ -0.73
COL12A1-207ENST00000483888 ARHGEF6Q15052 776 aa10.48□□□□□ -0.73
COL12A1-207ENST00000483888 POF1BQ8WVV4 589 aa10.48□□□□□ -0.73
COL12A1-207ENST00000483888 PNMA6FA0A0J9YX94 578 aa10.48□□□□□ -0.73
COL12A1-207ENST00000483888 FAM172BPA6NC97 362 aa10.48□□□□□ -0.73
COL12A1-207ENST00000483888 RARAP10276 462 aa10.48□□□□□ -0.73
COL12A1-207ENST00000483888 ACAT1P24752 427 aaKnown RBP10.48□□□□□ -0.73
COL12A1-207ENST00000483888 ARF3P61204 181 aaPredicted RBP10.48□□□□□ -0.73
COL12A1-207ENST00000483888 ARF1P84077 181 aaKnown RBP10.48□□□□□ -0.73
COL12A1-207ENST00000483888 ZCCHC23Q6ZST2 131 aa10.48□□□□□ -0.73
COL12A1-207ENST00000483888 SLC5A4Q9NY91 659 aa10.48□□□□□ -0.73
COL12A1-207ENST00000483888 TBC1D14Q9P2M4 693 aa10.48□□□□□ -0.73
COL12A1-207ENST00000483888 GIT1Q9Y2X7 761 aa10.48□□□□□ -0.73
COL12A1-207ENST00000483888 MDM4O15151 490 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 F8A1P23610 371 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 CHMP1BQ7LBR1 199 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 GSTCDQ8NEC7 633 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 PAGR1Q9BTK6 254 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 H3BN98 237 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 MRASO14807 208 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 CRYZL1O95825 349 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 PHKA2P46019 1235 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 MTX3Q5HYI7 312 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 FAM120BQ96EK7 910 aaKnown RBP10.47□□□□□ -0.73
COL12A1-207ENST00000483888 SSR3Q9UNL2 185 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 CIAO1O76071 339 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 HNF4AP41235 474 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 GYG1P46976 350 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 CD83Q01151 205 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 INO80DQ53TQ3 878 aaPredicted RBP10.47□□□□□ -0.73
COL12A1-207ENST00000483888 EDC4Q6P2E9 1401 aaKnown RBP10.47□□□□□ -0.73
COL12A1-207ENST00000483888 ALYREFQ86V81 257 aaKnown RBP10.47□□□□□ -0.73
COL12A1-207ENST00000483888 MSANTD3Q96H12 275 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 SRPK1Q96SB4 655 aaKnown RBP10.47□□□□□ -0.73
COL12A1-207ENST00000483888 CINPQ9BW66 212 aaPredicted RBP10.47□□□□□ -0.73
COL12A1-207ENST00000483888 MRPL9Q9BYD2 267 aaKnown RBP10.47□□□□□ -0.73
COL12A1-207ENST00000483888 EBF3Q9H4W6 596 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 RSAD1Q9HA92 442 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 CATSPERZQ9NTU4 200 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 EIF3KQ9UBQ5 218 aaKnown RBP10.47□□□□□ -0.73
COL12A1-207ENST00000483888 GMPPBQ9Y5P6 360 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 RPS6KL1Q9Y6S9 549 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 ZMYM2Q9UBW7 1377 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 RBP3P10745 1247 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 NFX1Q12986 1120 aaKnown RBP10.47□□□□□ -0.73
COL12A1-207ENST00000483888 TWF2Q6IBS0 349 aaKnown RBP10.47□□□□□ -0.73
COL12A1-207ENST00000483888 KCNV1Q6PIU1 500 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 DENND5BQ6ZUT9 1274 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 PGK1P00558 417 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 HOXC9P31274 260 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 CEBPGP53567 150 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 TPI1P60174 286 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 CHRNA2Q15822 529 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 SNAP47Q5SQN1 464 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 TIGD7Q6NT04 549 aaPredicted RBP10.47□□□□□ -0.73
COL12A1-207ENST00000483888 MACC1Q6ZN28 852 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 STRA8Q7Z7C7 330 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 GALNT12Q8IXK2 581 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 KBTBD7Q8WVZ9 684 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 STAP1Q9ULZ2 295 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 PRAMEF33A0A0G2JMD5 474 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 ISPDA4D126 451 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 KPNA6O60684 536 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 PRAMEF10O60809 474 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 THRBP10828 461 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 CAPGP40121 348 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 GSTM5P46439 218 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 RPL6Q02878 288 aaKnown RBP10.47□□□□□ -0.73
COL12A1-207ENST00000483888 CLEC16AQ2KHT3 1053 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms