RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 COL9A1P20849 921 aa16.87■□□□□ 0.29
COL2A1-206ENST00000483376 SDC4P31431 198 aa16.87■□□□□ 0.29
COL2A1-206ENST00000483376 SLC6A4P31645 630 aa16.87■□□□□ 0.29
COL2A1-206ENST00000483376 RDXP35241 583 aaKnown RBP16.87■□□□□ 0.29
COL2A1-206ENST00000483376 SULT1E1P49888 294 aa16.87■□□□□ 0.29
COL2A1-206ENST00000483376 PTPN5P54829 565 aa16.87■□□□□ 0.29
COL2A1-206ENST00000483376 RNASE9P60153 205 aaKnown RBP16.87■□□□□ 0.29
COL2A1-206ENST00000483376 MRPS21P82921 87 aaKnown RBP16.87■□□□□ 0.29
COL2A1-206ENST00000483376 MTAPQ13126 283 aa16.87■□□□□ 0.29
COL2A1-206ENST00000483376 MAPK8IP2Q13387 824 aaPredicted RBP16.87■□□□□ 0.29
COL2A1-206ENST00000483376 MS4A13Q5J8X5 152 aa16.87■□□□□ 0.29
COL2A1-206ENST00000483376 TTC39BQ5VTQ0 682 aaPredicted RBP16.87■□□□□ 0.29
COL2A1-206ENST00000483376 GRAMD4Q6IC98 578 aa16.87■□□□□ 0.29
COL2A1-206ENST00000483376 DNAJC24Q6P3W2 148 aa16.87■□□□□ 0.29
COL2A1-206ENST00000483376 WDR59Q6PJI9 974 aa16.87■□□□□ 0.29
COL2A1-206ENST00000483376 SND1Q7KZF4 910 aaKnown RBP eCLIP16.87■□□□□ 0.293e-8■■■■■ 30.4
COL2A1-206ENST00000483376 PRSS33Q8NF86 280 aa16.87■□□□□ 0.29
COL2A1-206ENST00000483376 TBCBQ99426 244 aa16.87■□□□□ 0.29
COL2A1-206ENST00000483376 PRMT1Q99873 361 aaKnown RBP16.87■□□□□ 0.29
COL2A1-206ENST00000483376 SELENOOQ9BVL4 669 aa16.87■□□□□ 0.29
COL2A1-206ENST00000483376 RBM12Q9NTZ6 932 aaKnown RBP16.87■□□□□ 0.29
COL2A1-206ENST00000483376 PIGVQ9NUD9 493 aa16.87■□□□□ 0.29
COL2A1-206ENST00000483376 ABHD10Q9NUJ1 306 aa16.87■□□□□ 0.29
COL2A1-206ENST00000483376 PARVAQ9NVD7 372 aa16.87■□□□□ 0.29
COL2A1-206ENST00000483376 DNAJC17Q9NVM6 304 aaKnown RBP16.87■□□□□ 0.29
COL2A1-206ENST00000483376 ADAMTS1Q9UHI8 967 aa16.87■□□□□ 0.29
COL2A1-206ENST00000483376 NENFQ9UMX5 172 aa16.87■□□□□ 0.29
COL2A1-206ENST00000483376 FTLP02792 175 aaPredicted RBP16.86■□□□□ 0.29
COL2A1-206ENST00000483376 PDGFRAP16234 1089 aa16.86■□□□□ 0.29
COL2A1-206ENST00000483376 RRM1P23921 792 aa16.86■□□□□ 0.29
COL2A1-206ENST00000483376 HOXA6P31267 233 aa16.86■□□□□ 0.29
COL2A1-206ENST00000483376 RFC1P35251 1148 aaPredicted RBP16.86■□□□□ 0.29
COL2A1-206ENST00000483376 KIR2DL1P43626 348 aaPredicted RBP16.86■□□□□ 0.29
COL2A1-206ENST00000483376 DGKGP49619 791 aa16.86■□□□□ 0.29
COL2A1-206ENST00000483376 DEUP1Q05D60 604 aa16.86■□□□□ 0.29
COL2A1-206ENST00000483376 MESP2Q0VG99 397 aa16.86■□□□□ 0.29
COL2A1-206ENST00000483376 TCF15Q12870 199 aa16.86■□□□□ 0.29
COL2A1-206ENST00000483376 CCDC14Q49A88 953 aa16.86■□□□□ 0.29
COL2A1-206ENST00000483376 C5orf22Q49AR2 442 aa16.86■□□□□ 0.29
COL2A1-206ENST00000483376 Q6ZS52 159 aa16.86■□□□□ 0.29
COL2A1-206ENST00000483376 MAML2Q8IZL2 1156 aaPredicted RBP16.86■□□□□ 0.29
COL2A1-206ENST00000483376 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.86■□□□□ 0.29
COL2A1-206ENST00000483376 HJURPQ8NCD3 748 aaPredicted RBP16.86■□□□□ 0.29
COL2A1-206ENST00000483376 JOSD2Q8TAC2 188 aa16.86■□□□□ 0.29
COL2A1-206ENST00000483376 USP33Q8TEY7 942 aa16.86■□□□□ 0.29
COL2A1-206ENST00000483376 FNIP1Q8TF40 1166 aa16.86■□□□□ 0.29
COL2A1-206ENST00000483376 DDI1Q8WTU0 396 aa16.86■□□□□ 0.29
COL2A1-206ENST00000483376 RXFP2Q8WXD0 754 aa16.86■□□□□ 0.29
COL2A1-206ENST00000483376 ACDQ96AP0 544 aa16.86■□□□□ 0.29
COL2A1-206ENST00000483376 C1orf74Q96LT6 269 aa16.86■□□□□ 0.29
COL2A1-206ENST00000483376 CFAP57Q96MR6 1250 aa16.86■□□□□ 0.29
COL2A1-206ENST00000483376 PRICKLE1Q96MT3 831 aaPredicted RBP16.86■□□□□ 0.29
COL2A1-206ENST00000483376 FAM126AQ9BYI3 521 aaPredicted RBP16.86■□□□□ 0.29
COL2A1-206ENST00000483376 WDCPQ9H6R7 721 aa16.86■□□□□ 0.29
COL2A1-206ENST00000483376 SPATA6Q9NWH7 488 aaPredicted RBP16.86■□□□□ 0.29
COL2A1-206ENST00000483376 ZNHIT6Q9NWK9 470 aaKnown RBP16.86■□□□□ 0.29
COL2A1-206ENST00000483376 TYW5A2RUC4 315 aaKnown RBP16.85■□□□□ 0.29
COL2A1-206ENST00000483376 ANKRD62A6NC57 917 aa16.85■□□□□ 0.29
COL2A1-206ENST00000483376 LAMTOR5O43504 91 aa16.85■□□□□ 0.29
COL2A1-206ENST00000483376 RNF40O75150 1001 aa16.85■□□□□ 0.29
COL2A1-206ENST00000483376 TFE3P19532 575 aaPredicted RBP16.85■□□□□ 0.29
COL2A1-206ENST00000483376 ZNF75DP51815 510 aa16.85■□□□□ 0.29
COL2A1-206ENST00000483376 ZNF143P52747 638 aaPredicted RBP16.85■□□□□ 0.29
COL2A1-206ENST00000483376 NME3Q13232 169 aa16.85■□□□□ 0.29
COL2A1-206ENST00000483376 MAMLD1Q13495 774 aa16.85■□□□□ 0.29
COL2A1-206ENST00000483376 EIF4HQ15056 248 aaKnown RBP16.85■□□□□ 0.29
COL2A1-206ENST00000483376 E2F5Q15329 346 aa16.85■□□□□ 0.29
COL2A1-206ENST00000483376 ANGPT1Q15389 498 aa16.85■□□□□ 0.29
COL2A1-206ENST00000483376 TSR1Q2NL82 804 aaKnown RBP16.85■□□□□ 0.29
COL2A1-206ENST00000483376 ASTE1Q2TB18 679 aaPredicted RBP16.85■□□□□ 0.29
COL2A1-206ENST00000483376 SYT13Q7L8C5 426 aa16.85■□□□□ 0.29
COL2A1-206ENST00000483376 KIAA0907Q7Z7F0 614 aaPredicted RBP16.85■□□□□ 0.29
COL2A1-206ENST00000483376 EMC1Q8N766 993 aa16.85■□□□□ 0.29
COL2A1-206ENST00000483376 NAT16Q8N8M0 369 aa16.85■□□□□ 0.29
COL2A1-206ENST00000483376 NELL1Q92832 810 aa16.85■□□□□ 0.29
COL2A1-206ENST00000483376 RNF34Q969K3 372 aa16.85■□□□□ 0.29
COL2A1-206ENST00000483376 HAPLN3Q96S86 360 aa16.85■□□□□ 0.29
COL2A1-206ENST00000483376 XPO7Q9UIA9 1087 aaKnown RBP16.85■□□□□ 0.29
COL2A1-206ENST00000483376 SCINQ9Y6U3 715 aa16.85■□□□□ 0.29
COL2A1-206ENST00000483376 CACNA1IQ9P0X4 2223 aa16.85■□□□□ 0.29
COL2A1-206ENST00000483376 A0A087X0T9 212 aa16.84■□□□□ 0.29
COL2A1-206ENST00000483376 GOLGA6L7A0A1B0GV03 622 aa16.84■□□□□ 0.29
COL2A1-206ENST00000483376 AKR1B15C9JRZ8 316 aaPredicted RBP16.84■□□□□ 0.29
COL2A1-206ENST00000483376 F5H5T6 163 aa16.84■□□□□ 0.29
COL2A1-206ENST00000483376 NPC1O15118 1278 aa16.84■□□□□ 0.29
COL2A1-206ENST00000483376 MOCS2O96007 188 aaPredicted RBP16.84■□□□□ 0.29
COL2A1-206ENST00000483376 PLEKP08567 350 aaPredicted RBP16.84■□□□□ 0.29
COL2A1-206ENST00000483376 FAM228BP0C875 321 aa16.84■□□□□ 0.29
COL2A1-206ENST00000483376 TDGF1P13385 188 aa16.84■□□□□ 0.29
COL2A1-206ENST00000483376 TACR2P21452 398 aa16.84■□□□□ 0.29
COL2A1-206ENST00000483376 GPD1P21695 349 aa16.84■□□□□ 0.29
COL2A1-206ENST00000483376 CXCL12P48061 93 aa16.84■□□□□ 0.29
COL2A1-206ENST00000483376 ALKBH5Q6P6C2 394 aaKnown RBP16.84■□□□□ 0.29
COL2A1-206ENST00000483376 RFWD3Q6PCD5 774 aa16.84■□□□□ 0.29
COL2A1-206ENST00000483376 TRMT11Q7Z4G4 463 aaKnown RBP16.84■□□□□ 0.29
COL2A1-206ENST00000483376 WFIKKN2Q8TEU8 576 aa16.84■□□□□ 0.29
COL2A1-206ENST00000483376 NTAN1Q96AB6 310 aa16.84■□□□□ 0.29
COL2A1-206ENST00000483376 CNPY3Q9BT09 278 aa16.84■□□□□ 0.29
COL2A1-206ENST00000483376 TKTL2Q9H0I9 626 aa16.84■□□□□ 0.29
COL2A1-206ENST00000483376 MRPL47Q9HD33 250 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms