RNA–Protein interactions for RNA: ENST00000482236.5

SORT1-204, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-204ENST00000482236 STK32AQ8WU08 396 aa11.66□□□□□ -0.54
SORT1-204ENST00000482236 SORCS1Q8WY21 1168 aa11.66□□□□□ -0.54
SORT1-204ENST00000482236 SHC3Q92529 594 aa11.66□□□□□ -0.54
SORT1-204ENST00000482236 SNX19Q92543 992 aa11.66□□□□□ -0.54
SORT1-204ENST00000482236 TCEAL3Q969E4 200 aa11.66□□□□□ -0.54
SORT1-204ENST00000482236 NAT10Q9H0A0 1025 aaKnown RBP11.66□□□□□ -0.54
SORT1-204ENST00000482236 VPS16Q9H269 839 aa11.66□□□□□ -0.54
SORT1-204ENST00000482236 PRDM16Q9HAZ2 1276 aa11.66□□□□□ -0.54
SORT1-204ENST00000482236 PLCB1Q9NQ66 1216 aa11.66□□□□□ -0.54
SORT1-204ENST00000482236 SAMSN1Q9NSI8 373 aaKnown RBP11.66□□□□□ -0.54
SORT1-204ENST00000482236 LMBRD1Q9NUN5 540 aa11.66□□□□□ -0.54
SORT1-204ENST00000482236 SEPT11Q9NVA2 429 aaKnown RBP11.66□□□□□ -0.54
SORT1-204ENST00000482236 ELOVL2Q9NXB9 296 aa11.66□□□□□ -0.54
SORT1-204ENST00000482236 STARD13Q9Y3M8 1113 aa11.66□□□□□ -0.54
SORT1-204ENST00000482236 OTOGLQ3ZCN5 2332 aa11.65□□□□□ -0.54
SORT1-204ENST00000482236 GOLGA6L7A0A1B0GV03 622 aa11.65□□□□□ -0.54
SORT1-204ENST00000482236 BCLAF3A2AJT9 711 aaKnown RBP11.65□□□□□ -0.54
SORT1-204ENST00000482236 GDF9O60383 454 aa11.65□□□□□ -0.54
SORT1-204ENST00000482236 TRUB2O95900 331 aaKnown RBP11.65□□□□□ -0.54
SORT1-204ENST00000482236 CISD3P0C7P0 127 aa11.65□□□□□ -0.54
SORT1-204ENST00000482236 HOXD9P28356 352 aaPredicted RBP11.65□□□□□ -0.54
SORT1-204ENST00000482236 MAPK8P45983 427 aa11.65□□□□□ -0.54
SORT1-204ENST00000482236 ATXN1P54253 815 aaKnown RBP11.65□□□□□ -0.54
SORT1-204ENST00000482236 RING1Q06587 406 aa11.65□□□□□ -0.54
SORT1-204ENST00000482236 DRAP1Q14919 205 aaPredicted RBP11.65□□□□□ -0.54
SORT1-204ENST00000482236 ZC3H12AQ5D1E8 599 aaKnown RBP11.65□□□□□ -0.54
SORT1-204ENST00000482236 TRIM61Q5EBN2 209 aa11.65□□□□□ -0.54
SORT1-204ENST00000482236 CCDC183Q5T5S1 534 aa11.65□□□□□ -0.54
SORT1-204ENST00000482236 RAP1GAP2Q684P5 730 aa11.65□□□□□ -0.54
SORT1-204ENST00000482236 KIAA1211LQ6NV74 962 aa11.65□□□□□ -0.54
SORT1-204ENST00000482236 RABEPKQ7Z6M1 372 aa11.65□□□□□ -0.54
SORT1-204ENST00000482236 FAM124AQ86V42 546 aa11.65□□□□□ -0.54
SORT1-204ENST00000482236 SLC47A2Q86VL8 602 aa11.65□□□□□ -0.54
SORT1-204ENST00000482236 CYB5D2Q8WUJ1 264 aa11.65□□□□□ -0.54
SORT1-204ENST00000482236 SIPA1Q96FS4 1042 aa11.65□□□□□ -0.54
SORT1-204ENST00000482236 HSPA12BQ96MM6 686 aa11.65□□□□□ -0.54
SORT1-204ENST00000482236 GABRG3Q99928 467 aa11.65□□□□□ -0.54
SORT1-204ENST00000482236 GTPBP2Q9BX10 602 aaKnown RBP11.65□□□□□ -0.54
SORT1-204ENST00000482236 MIR1-1HGQ9H1L0 117 aa11.65□□□□□ -0.54
SORT1-204ENST00000482236 SLC6A17Q9H1V8 727 aa11.65□□□□□ -0.54
SORT1-204ENST00000482236 FAM207AQ9NSI2 230 aaPredicted RBP11.65□□□□□ -0.54
SORT1-204ENST00000482236 STAP1Q9ULZ2 295 aa11.65□□□□□ -0.54
SORT1-204ENST00000482236 CNTN6Q9UQ52 1028 aa11.65□□□□□ -0.54
SORT1-204ENST00000482236 FHOD1Q9Y613 1164 aa11.65□□□□□ -0.54
SORT1-204ENST00000482236 USP34Q70CQ2 3546 aa11.65□□□□□ -0.54
SORT1-204ENST00000482236 KIAA1549LQ6ZVL6 1849 aa11.65□□□□□ -0.55
SORT1-204ENST00000482236 VPS13AQ96RL7 3174 aa11.65□□□□□ -0.55
SORT1-204ENST00000482236 BECN2A8MW95 431 aa11.64□□□□□ -0.55
SORT1-204ENST00000482236 WASH3PC4AMC7 463 aa11.64□□□□□ -0.55
SORT1-204ENST00000482236 GOLGA8SH3BPF8 625 aa11.64□□□□□ -0.55
SORT1-204ENST00000482236 SLC30A4O14863 429 aa11.64□□□□□ -0.55
SORT1-204ENST00000482236 PAPSS1O43252 624 aaPredicted RBP11.64□□□□□ -0.55
SORT1-204ENST00000482236 RNASEH1O60930 286 aaKnown RBP11.64□□□□□ -0.55
SORT1-204ENST00000482236 HLA-EP13747 358 aa11.64□□□□□ -0.55
SORT1-204ENST00000482236 GNSP15586 552 aa11.64□□□□□ -0.55
SORT1-204ENST00000482236 CCR1P32246 355 aa11.64□□□□□ -0.55
SORT1-204ENST00000482236 NNMTP40261 264 aa11.64□□□□□ -0.55
SORT1-204ENST00000482236 IL12RB1P42701 662 aa11.64□□□□□ -0.55
SORT1-204ENST00000482236 SULT1E1P49888 294 aa11.64□□□□□ -0.55
SORT1-204ENST00000482236 MYL5Q02045 173 aa11.64□□□□□ -0.55
SORT1-204ENST00000482236 LMAN2Q12907 356 aa11.64□□□□□ -0.55
SORT1-204ENST00000482236 NNTQ13423 1086 aa11.64□□□□□ -0.55
SORT1-204ENST00000482236 FUT11Q495W5 492 aa11.64□□□□□ -0.55
SORT1-204ENST00000482236 TTC31Q49AM3 519 aaPredicted RBP11.64□□□□□ -0.55
SORT1-204ENST00000482236 PPM1JQ5JR12 505 aa11.64□□□□□ -0.55
SORT1-204ENST00000482236 FAM102AQ5T9C2 384 aaPredicted RBP11.64□□□□□ -0.55
SORT1-204ENST00000482236 STPG1Q5TH74 334 aa11.64□□□□□ -0.55
SORT1-204ENST00000482236 MBLAC2Q68D91 279 aa11.64□□□□□ -0.55
SORT1-204ENST00000482236 FAM183BPQ6ZVS7 135 aa11.64□□□□□ -0.55
SORT1-204ENST00000482236 ERICH1Q86X53 443 aa11.64□□□□□ -0.55
SORT1-204ENST00000482236 IRF2BP1Q8IU81 584 aa11.64□□□□□ -0.55
SORT1-204ENST00000482236 DEFB106AQ8N104 65 aa11.64□□□□□ -0.55
SORT1-204ENST00000482236 CFAP52Q8N1V2 620 aa11.64□□□□□ -0.55
SORT1-204ENST00000482236 ENOX1Q8TC92 643 aaKnown RBP11.64□□□□□ -0.55
SORT1-204ENST00000482236 BTN2A3PQ96KV6 586 aa11.64□□□□□ -0.55
SORT1-204ENST00000482236 CPXM1Q96SM3 734 aa11.64□□□□□ -0.55
SORT1-204ENST00000482236 SLC4A5Q9BY07 1137 aa11.64□□□□□ -0.55
SORT1-204ENST00000482236 NUCKS1Q9H1E3 243 aaKnown RBP11.64□□□□□ -0.55
SORT1-204ENST00000482236 TMEM9BQ9NQ34 198 aa11.64□□□□□ -0.55
SORT1-204ENST00000482236 DLL3Q9NYJ7 618 aa11.64□□□□□ -0.55
SORT1-204ENST00000482236 THAP10Q9P2Z0 257 aaPredicted RBP11.64□□□□□ -0.55
SORT1-204ENST00000482236 PCDHGC3Q9UN70 934 aa11.64□□□□□ -0.55
SORT1-204ENST00000482236 PAXBP1Q9Y5B6 917 aa11.64□□□□□ -0.55
SORT1-204ENST00000482236 MYO15AQ9UKN7 3530 aa11.64□□□□□ -0.55
SORT1-204ENST00000482236 A0A1W2PQF6 199 aa11.63□□□□□ -0.55
SORT1-204ENST00000482236 FOXN3O00409 490 aaPredicted RBP11.63□□□□□ -0.55
SORT1-204ENST00000482236 DAB1O75553 588 aa11.63□□□□□ -0.55
SORT1-204ENST00000482236 GFPT2O94808 682 aa11.63□□□□□ -0.55
SORT1-204ENST00000482236 DNTTP04053 509 aa11.63□□□□□ -0.55
SORT1-204ENST00000482236 GLI1P08151 1106 aa11.63□□□□□ -0.55
SORT1-204ENST00000482236 UCHL3P15374 230 aa11.63□□□□□ -0.55
SORT1-204ENST00000482236 DESP17661 470 aa11.63□□□□□ -0.55
SORT1-204ENST00000482236 TACR2P21452 398 aa11.63□□□□□ -0.55
SORT1-204ENST00000482236 PRKCHP24723 683 aa11.63□□□□□ -0.55
SORT1-204ENST00000482236 CD6P30203 668 aa11.63□□□□□ -0.55
SORT1-204ENST00000482236 HLA-FP30511 346 aa11.63□□□□□ -0.55
SORT1-204ENST00000482236 SLC6A4P31645 630 aa11.63□□□□□ -0.55
SORT1-204ENST00000482236 PTGER3P43115 390 aa11.63□□□□□ -0.55
SORT1-204ENST00000482236 SGSHP51688 502 aa11.63□□□□□ -0.55
SORT1-204ENST00000482236 POLR2FP61218 127 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms