RNA–Protein interactions for RNA: ENST00000482152.1

CCDC78-212, Transcript of coiled-coil domain containing 78, humanhuman

TSL 5

Gene CCDC78, Length 899 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-212ENST00000482152 SEMA4AQ9H3S1 761 aa16.94■□□□□ 0.3
CCDC78-212ENST00000482152 SLC8A2Q9UPR5 921 aa16.94■□□□□ 0.3
CCDC78-212ENST00000482152 RTN2O75298 545 aa16.93■□□□□ 0.3
CCDC78-212ENST00000482152 PDGFRAP16234 1089 aa16.93■□□□□ 0.3
CCDC78-212ENST00000482152 HOXD9P28356 352 aaPredicted RBP16.93■□□□□ 0.3
CCDC78-212ENST00000482152 SDC4P31431 198 aa16.93■□□□□ 0.3
CCDC78-212ENST00000482152 CASP14P31944 242 aa16.93■□□□□ 0.3
CCDC78-212ENST00000482152 RDXP35241 583 aaKnown RBP16.93■□□□□ 0.3
CCDC78-212ENST00000482152 FLT3P36888 993 aa16.93■□□□□ 0.3
CCDC78-212ENST00000482152 PTPN9P43378 593 aa16.93■□□□□ 0.3
CCDC78-212ENST00000482152 KIR2DL1P43626 348 aaPredicted RBP16.93■□□□□ 0.3
CCDC78-212ENST00000482152 SULT1E1P49888 294 aa16.93■□□□□ 0.3
CCDC78-212ENST00000482152 PITX1P78337 314 aaPredicted RBP16.93■□□□□ 0.3
CCDC78-212ENST00000482152 EIF4HQ15056 248 aaKnown RBP16.93■□□□□ 0.3
CCDC78-212ENST00000482152 MS4A13Q5J8X5 152 aa16.93■□□□□ 0.3
CCDC78-212ENST00000482152 TTC39BQ5VTQ0 682 aaPredicted RBP16.93■□□□□ 0.3
CCDC78-212ENST00000482152 NADSYN1Q6IA69 706 aa16.93■□□□□ 0.3
CCDC78-212ENST00000482152 BNIPLQ7Z465 357 aa16.93■□□□□ 0.3
CCDC78-212ENST00000482152 VSTM4Q8IW00 320 aa16.93■□□□□ 0.3
CCDC78-212ENST00000482152 OR8K1Q8NGG5 319 aa16.93■□□□□ 0.3
CCDC78-212ENST00000482152 UCMAQ8WVF2 138 aa16.93■□□□□ 0.3
CCDC78-212ENST00000482152 NELL1Q92832 810 aa16.93■□□□□ 0.3
CCDC78-212ENST00000482152 BHMTQ93088 406 aa16.93■□□□□ 0.3
CCDC78-212ENST00000482152 C1orf74Q96LT6 269 aa16.93■□□□□ 0.3
CCDC78-212ENST00000482152 METTL5Q9NRN9 209 aaKnown RBP16.93■□□□□ 0.3
CCDC78-212ENST00000482152 PARVAQ9NVD7 372 aa16.93■□□□□ 0.3
CCDC78-212ENST00000482152 ZNHIT6Q9NWK9 470 aaKnown RBP16.93■□□□□ 0.3
CCDC78-212ENST00000482152 ARHGEF38Q9NXL2 777 aa16.93■□□□□ 0.3
CCDC78-212ENST00000482152 PLK2Q9NYY3 685 aa16.93■□□□□ 0.3
CCDC78-212ENST00000482152 PCDHGA2Q9Y5H1 932 aa16.93■□□□□ 0.3
CCDC78-212ENST00000482152 CCDC163A0A0D9SF12 145 aa16.92■□□□□ 0.3
CCDC78-212ENST00000482152 C2CD4BA6NLJ0 364 aa16.92■□□□□ 0.3
CCDC78-212ENST00000482152 F5H5T6 163 aa16.92■□□□□ 0.3
CCDC78-212ENST00000482152 DDX3XO00571 662 aaKnown RBP eCLIP16.92■□□□□ 0.3
CCDC78-212ENST00000482152 TSPAN3O60637 253 aa16.92■□□□□ 0.3
CCDC78-212ENST00000482152 MOCS2O96007 188 aaPredicted RBP16.92■□□□□ 0.3
CCDC78-212ENST00000482152 FTLP02792 175 aaPredicted RBP16.92■□□□□ 0.3
CCDC78-212ENST00000482152 MYBL1P10243 752 aa16.92■□□□□ 0.3
CCDC78-212ENST00000482152 HNRNPLP14866 589 aaKnown RBP eCLIP16.92■□□□□ 0.3
CCDC78-212ENST00000482152 OXCT1P55809 520 aa16.92■□□□□ 0.3
CCDC78-212ENST00000482152 NHLH1Q02575 133 aa16.92■□□□□ 0.3
CCDC78-212ENST00000482152 KDSRQ06136 332 aa16.92■□□□□ 0.3
CCDC78-212ENST00000482152 ARID5BQ14865 1188 aa16.92■□□□□ 0.3
CCDC78-212ENST00000482152 TDRD12Q587J7 1177 aaKnown RBP16.92■□□□□ 0.3
CCDC78-212ENST00000482152 EOGTQ5NDL2 527 aa16.92■□□□□ 0.3
CCDC78-212ENST00000482152 RABGAP1LQ5R372 815 aa16.92■□□□□ 0.3
CCDC78-212ENST00000482152 C10orf76Q5T2E6 689 aa16.92■□□□□ 0.3
CCDC78-212ENST00000482152 E4F1Q66K89 784 aaPredicted RBP16.92■□□□□ 0.3
CCDC78-212ENST00000482152 HGSNATQ68CP4 663 aa16.92■□□□□ 0.3
CCDC78-212ENST00000482152 SDE2Q6IQ49 451 aa16.92■□□□□ 0.3
CCDC78-212ENST00000482152 DNAJC24Q6P3W2 148 aa16.92■□□□□ 0.3
CCDC78-212ENST00000482152 STRADAQ7RTN6 431 aa16.92■□□□□ 0.3
CCDC78-212ENST00000482152 ANKS1BQ7Z6G8 1248 aa16.92■□□□□ 0.3
CCDC78-212ENST00000482152 FIBINQ8TAL6 211 aa16.92■□□□□ 0.3
CCDC78-212ENST00000482152 WFIKKN2Q8TEU8 576 aa16.92■□□□□ 0.3
CCDC78-212ENST00000482152 HAPLN3Q96S86 360 aa16.92■□□□□ 0.3
CCDC78-212ENST00000482152 TBCBQ99426 244 aa16.92■□□□□ 0.3
CCDC78-212ENST00000482152 TRIM5Q9C035 493 aa16.92■□□□□ 0.3
CCDC78-212ENST00000482152 ISCUQ9H1K1 167 aa16.92■□□□□ 0.3
CCDC78-212ENST00000482152 PIGVQ9NUD9 493 aa16.92■□□□□ 0.3
CCDC78-212ENST00000482152 ZSCAN32Q9NX65 697 aa16.92■□□□□ 0.3
CCDC78-212ENST00000482152 MMP17Q9ULZ9 603 aa16.92■□□□□ 0.3
CCDC78-212ENST00000482152 SYNJ2BP-COX16A0A087WUM0 186 aa16.91■□□□□ 0.3
CCDC78-212ENST00000482152 GOLGA6L7A0A1B0GV03 622 aa16.91■□□□□ 0.3
CCDC78-212ENST00000482152 TCRBV5S1A1TA0A578 114 aa16.91■□□□□ 0.3
CCDC78-212ENST00000482152 TBL1XO60907 577 aa16.91■□□□□ 0.3
CCDC78-212ENST00000482152 SKILP12757 684 aa16.91■□□□□ 0.3
CCDC78-212ENST00000482152 TACR2P21452 398 aa16.91■□□□□ 0.3
CCDC78-212ENST00000482152 SLC6A4P31645 630 aa16.91■□□□□ 0.3
CCDC78-212ENST00000482152 SATB1Q01826 763 aa16.91■□□□□ 0.3
CCDC78-212ENST00000482152 ARL13BQ3SXY8 428 aa16.91■□□□□ 0.3
CCDC78-212ENST00000482152 C2orf27AQ580R0 203 aa16.91■□□□□ 0.3
CCDC78-212ENST00000482152 RFWD3Q6PCD5 774 aa16.91■□□□□ 0.3
CCDC78-212ENST00000482152 KIAA0907Q7Z7F0 614 aaPredicted RBP16.91■□□□□ 0.3
CCDC78-212ENST00000482152 CHSY1Q86X52 802 aa16.91■□□□□ 0.3
CCDC78-212ENST00000482152 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.91■□□□□ 0.3
CCDC78-212ENST00000482152 RXFP2Q8WXD0 754 aa16.91■□□□□ 0.3
CCDC78-212ENST00000482152 ATRIPQ8WXE1 791 aa16.91■□□□□ 0.3
CCDC78-212ENST00000482152 CENPIQ92674 756 aaPredicted RBP16.91■□□□□ 0.3
CCDC78-212ENST00000482152 CFAP57Q96MR6 1250 aa16.91■□□□□ 0.3
CCDC78-212ENST00000482152 PPP1R9BQ96SB3 815 aa16.91■□□□□ 0.3
CCDC78-212ENST00000482152 DNAJC7Q99615 494 aa16.91■□□□□ 0.3
CCDC78-212ENST00000482152 PRMT1Q99873 361 aaKnown RBP16.91■□□□□ 0.3
CCDC78-212ENST00000482152 TKTL2Q9H0I9 626 aa16.91■□□□□ 0.3
CCDC78-212ENST00000482152 COX16Q9P0S2 106 aa16.91■□□□□ 0.3
CCDC78-212ENST00000482152 ADAMTS1Q9UHI8 967 aa16.91■□□□□ 0.3
CCDC78-212ENST00000482152 RAPGEFL1Q9UHV5 662 aa16.91■□□□□ 0.3
CCDC78-212ENST00000482152 PROB1E7EW31 1015 aa16.9■□□□□ 0.3
CCDC78-212ENST00000482152 K7ESF4 209 aa16.9■□□□□ 0.3
CCDC78-212ENST00000482152 TDGF1P13385 188 aa16.9■□□□□ 0.3
CCDC78-212ENST00000482152 GPD1P21695 349 aa16.9■□□□□ 0.3
CCDC78-212ENST00000482152 CNR2P34972 360 aa16.9■□□□□ 0.3
CCDC78-212ENST00000482152 RFC1P35251 1148 aaPredicted RBP16.9■□□□□ 0.3
CCDC78-212ENST00000482152 TIE1P35590 1138 aa16.9■□□□□ 0.3
CCDC78-212ENST00000482152 NBL1P41271 181 aa16.9■□□□□ 0.3
CCDC78-212ENST00000482152 DGKEP52429 567 aa16.9■□□□□ 0.3
CCDC78-212ENST00000482152 ZNF143P52747 638 aaPredicted RBP16.9■□□□□ 0.3
CCDC78-212ENST00000482152 SEC13P55735 322 aa16.9■□□□□ 0.3
CCDC78-212ENST00000482152 MESP2Q0VG99 397 aa16.9■□□□□ 0.3
CCDC78-212ENST00000482152 SLC12A1Q13621 1099 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms