RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 RNF139Q8WU17 664 aa14.93□□□□□ -0.02
CHD3-211ENST00000481999 PGBD4Q96DM1 585 aa14.93□□□□□ -0.02
CHD3-211ENST00000481999 SLC2A13Q96QE2 648 aa14.93□□□□□ -0.02
CHD3-211ENST00000481999 PITPNM3Q9BZ71 974 aa14.93□□□□□ -0.02
CHD3-211ENST00000481999 TRABDQ9H4I3 376 aa14.93□□□□□ -0.02
CHD3-211ENST00000481999 SLC24A2Q9UI40 661 aa14.93□□□□□ -0.02
CHD3-211ENST00000481999 FRMPD3Q5JV73 1810 aa14.93□□□□□ -0.02
CHD3-211ENST00000481999 CABYRO75952 493 aa14.92□□□□□ -0.02
CHD3-211ENST00000481999 ASMTLO95671 621 aa14.92□□□□□ -0.02
CHD3-211ENST00000481999 LTFP02788 710 aa14.92□□□□□ -0.02
CHD3-211ENST00000481999 KRT15P19012 456 aa14.92□□□□□ -0.02
CHD3-211ENST00000481999 FOXN2P32314 431 aa14.92□□□□□ -0.02
CHD3-211ENST00000481999 SPARCL1Q14515 664 aa14.92□□□□□ -0.02
CHD3-211ENST00000481999 SLC39A12Q504Y0 691 aa14.92□□□□□ -0.02
CHD3-211ENST00000481999 LRRC8DQ7L1W4 858 aa14.92□□□□□ -0.02
CHD3-211ENST00000481999 TMEM173Q86WV6 379 aaPredicted RBP14.92□□□□□ -0.02
CHD3-211ENST00000481999 DEPDC1BQ8WUY9 529 aa14.92□□□□□ -0.02
CHD3-211ENST00000481999 SMC6Q96SB8 1091 aa14.92□□□□□ -0.02
CHD3-211ENST00000481999 ACBD6Q9BR61 282 aa14.92□□□□□ -0.02
CHD3-211ENST00000481999 PHACTR1Q9C0D0 580 aa14.92□□□□□ -0.02
CHD3-211ENST00000481999 NOD2Q9HC29 1040 aa14.92□□□□□ -0.02
CHD3-211ENST00000481999 CYLDQ9NQC7 956 aa14.92□□□□□ -0.02
CHD3-211ENST00000481999 ABI2Q9NYB9 513 aaPredicted RBP14.92□□□□□ -0.02
CHD3-211ENST00000481999 ARVCFO00192 962 aa14.92□□□□□ -0.02
CHD3-211ENST00000481999 MSI1O43347 362 aaKnown RBP14.92□□□□□ -0.02
CHD3-211ENST00000481999 EZRP15311 586 aaKnown RBP14.92□□□□□ -0.02
CHD3-211ENST00000481999 NQO1P15559 274 aaKnown RBP14.92□□□□□ -0.02
CHD3-211ENST00000481999 YWHAHQ04917 246 aaPredicted RBP14.92□□□□□ -0.02
CHD3-211ENST00000481999 OLIG2Q13516 323 aa14.92□□□□□ -0.02
CHD3-211ENST00000481999 CGB2Q6NT52 195 aa14.92□□□□□ -0.02
CHD3-211ENST00000481999 ARCQ7LC44 396 aa14.92□□□□□ -0.02
CHD3-211ENST00000481999 BNIPLQ7Z465 357 aa14.92□□□□□ -0.02
CHD3-211ENST00000481999 FITM2Q8N6M3 262 aa14.92□□□□□ -0.02
CHD3-211ENST00000481999 DENND1AQ8TEH3 1009 aa14.92□□□□□ -0.02
CHD3-211ENST00000481999 DEFB118Q96PH6 123 aa14.92□□□□□ -0.02
CHD3-211ENST00000481999 ETNK1Q9HBU6 452 aa14.92□□□□□ -0.02
CHD3-211ENST00000481999 BAIAP2L1Q9UHR4 511 aa14.92□□□□□ -0.02
CHD3-211ENST00000481999 NLRC5Q86WI3 1866 aa14.91□□□□□ -0.02
CHD3-211ENST00000481999 DESP17661 470 aa14.91□□□□□ -0.02
CHD3-211ENST00000481999 TGM2P21980 687 aa14.91□□□□□ -0.02
CHD3-211ENST00000481999 NUMBP49757 651 aa14.91□□□□□ -0.02
CHD3-211ENST00000481999 CCDC15Q0P6D6 951 aa14.91□□□□□ -0.02
CHD3-211ENST00000481999 NOMO2Q5JPE7 1267 aa14.91□□□□□ -0.02
CHD3-211ENST00000481999 BSPRYQ5W0U4 402 aa14.91□□□□□ -0.02
CHD3-211ENST00000481999 RGS9BPQ6ZS82 235 aa14.91□□□□□ -0.02
CHD3-211ENST00000481999 SCN4BQ8IWT1 228 aa14.91□□□□□ -0.02
CHD3-211ENST00000481999 COLGALT2Q8IYK4 626 aa14.91□□□□□ -0.02
CHD3-211ENST00000481999 KLHL29Q96CT2 875 aa14.91□□□□□ -0.02
CHD3-211ENST00000481999 SUSD3Q96L08 255 aa14.91□□□□□ -0.02
CHD3-211ENST00000481999 PAIP2Q9BPZ3 127 aaKnown RBP14.91□□□□□ -0.02
CHD3-211ENST00000481999 VWA8A3KMH1 1905 aa14.91□□□□□ -0.02
CHD3-211ENST00000481999 SPAG7O75391 227 aa14.91□□□□□ -0.02
CHD3-211ENST00000481999 SCNN1AP37088 669 aa14.91□□□□□ -0.02
CHD3-211ENST00000481999 ELK3P41970 407 aa14.91□□□□□ -0.02
CHD3-211ENST00000481999 CCL23P55773 120 aa14.91□□□□□ -0.02
CHD3-211ENST00000481999 KCNJ11Q14654 390 aa14.91□□□□□ -0.02
CHD3-211ENST00000481999 PKN2Q16513 984 aaKnown RBP14.91□□□□□ -0.02
CHD3-211ENST00000481999 DDR2Q16832 855 aa14.91□□□□□ -0.02
CHD3-211ENST00000481999 METTL23Q86XA0 190 aa14.91□□□□□ -0.02
CHD3-211ENST00000481999 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.91□□□□□ -0.02
CHD3-211ENST00000481999 SLC43A3Q8NBI5 491 aa14.91□□□□□ -0.02
CHD3-211ENST00000481999 PYROXD1Q8WU10 500 aa14.91□□□□□ -0.02
CHD3-211ENST00000481999 RMDN2Q96LZ7 410 aa14.91□□□□□ -0.02
CHD3-211ENST00000481999 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.91□□□□□ -0.02
CHD3-211ENST00000481999 CSNK1G1Q9HCP0 422 aa14.91□□□□□ -0.02
CHD3-211ENST00000481999 CNGB3Q9NQW8 809 aa14.91□□□□□ -0.02
CHD3-211ENST00000481999 SEPT10Q9P0V9 454 aa14.91□□□□□ -0.02
CHD3-211ENST00000481999 PSMC3IPQ9P2W1 217 aaPredicted RBP14.91□□□□□ -0.02
CHD3-211ENST00000481999 FETUBQ9UGM5 382 aa14.91□□□□□ -0.02
CHD3-211ENST00000481999 SFMBT1Q9UHJ3 866 aa14.91□□□□□ -0.02
CHD3-211ENST00000481999 STAP1Q9ULZ2 295 aa14.91□□□□□ -0.02
CHD3-211ENST00000481999 STARD13Q9Y3M8 1113 aa14.91□□□□□ -0.02
CHD3-211ENST00000481999 XIRP2A4UGR9 3374 aa14.9□□□□□ -0.02
CHD3-211ENST00000481999 KCNK1O00180 336 aa14.9□□□□□ -0.02
CHD3-211ENST00000481999 CYP11A1P05108 521 aa14.9□□□□□ -0.02
CHD3-211ENST00000481999 STIP1P31948 543 aaKnown RBP14.9□□□□□ -0.02
CHD3-211ENST00000481999 PHBP35232 272 aa14.9□□□□□ -0.02
CHD3-211ENST00000481999 GRIK1P39086 918 aa14.9□□□□□ -0.02
CHD3-211ENST00000481999 ARL4AP40617 200 aa14.9□□□□□ -0.02
CHD3-211ENST00000481999 SKIV2L2P42285 1042 aaKnown RBP14.9□□□□□ -0.02
CHD3-211ENST00000481999 SLC5A3P53794 718 aa14.9□□□□□ -0.02
CHD3-211ENST00000481999 ARPP19P56211 112 aa14.9□□□□□ -0.02
CHD3-211ENST00000481999 DSC1Q08554 894 aa14.9□□□□□ -0.02
CHD3-211ENST00000481999 C3orf62Q6ZUJ4 267 aa14.9□□□□□ -0.02
CHD3-211ENST00000481999 DENND5BQ6ZUT9 1274 aa14.9□□□□□ -0.02
CHD3-211ENST00000481999 FAM47EQ6ZV65 393 aa14.9□□□□□ -0.02
CHD3-211ENST00000481999 TAC4Q86UU9 113 aa14.9□□□□□ -0.02
CHD3-211ENST00000481999 NPWQ8N729 165 aa14.9□□□□□ -0.02
CHD3-211ENST00000481999 PTPRDP23468 1912 aa14.9□□□□□ -0.02
CHD3-211ENST00000481999 KIAA0100Q14667 2235 aaKnown RBP14.9□□□□□ -0.02
CHD3-211ENST00000481999 ARL4CP56559 192 aa14.9□□□□□ -0.02
CHD3-211ENST00000481999 KCNJ2P63252 427 aa14.9□□□□□ -0.02
CHD3-211ENST00000481999 CRADDP78560 199 aa14.9□□□□□ -0.02
CHD3-211ENST00000481999 AP1B1Q10567 949 aa14.9□□□□□ -0.02
CHD3-211ENST00000481999 DCLRE1AQ6PJP8 1040 aa14.9□□□□□ -0.02
CHD3-211ENST00000481999 FAM126BQ8IXS8 530 aa14.9□□□□□ -0.02
CHD3-211ENST00000481999 MPP5Q8N3R9 675 aa14.9□□□□□ -0.02
CHD3-211ENST00000481999 CCNYQ8ND76 341 aa14.9□□□□□ -0.02
CHD3-211ENST00000481999 FBF1Q8TES7 1133 aa14.9□□□□□ -0.02
CHD3-211ENST00000481999 NCAPGQ9BPX3 1015 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms