RNA–Protein interactions for RNA: ENST00000481673.5

CHKB-209, Transcript of choline kinase beta, humanhuman

TSL 1 (best)

Gene CHKB, Length 1,856 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-209ENST00000481673 DHRS4Q9BTZ2 278 aa20.48■□□□□ 0.87
CHKB-209ENST00000481673 SSU72Q9NP77 194 aaKnown RBP20.48■□□□□ 0.87
CHKB-209ENST00000481673 NKIRAS1Q9NYS0 192 aa20.48■□□□□ 0.87
CHKB-209ENST00000481673 CTNNAL1Q9UBT7 734 aa20.48■□□□□ 0.87
CHKB-209ENST00000481673 RSPH14Q9UHP6 348 aa20.48■□□□□ 0.87
CHKB-209ENST00000481673 SMG5Q9UPR3 1016 aaKnown RBP20.48■□□□□ 0.87
CHKB-209ENST00000481673 PRG3Q9Y2Y8 225 aaPredicted RBP20.48■□□□□ 0.87
CHKB-209ENST00000481673 TSC2P49815 1807 aa20.48■□□□□ 0.87
CHKB-209ENST00000481673 B4GALT3O60512 393 aa20.47■□□□□ 0.87
CHKB-209ENST00000481673 MAP3K6O95382 1288 aa20.47■□□□□ 0.87
CHKB-209ENST00000481673 SSTR1P30872 391 aa20.47■□□□□ 0.87
CHKB-209ENST00000481673 CCT5P48643 541 aa20.47■□□□□ 0.87
CHKB-209ENST00000481673 RABGGTBP53611 331 aa20.47■□□□□ 0.87
CHKB-209ENST00000481673 TMED2Q15363 201 aa20.47■□□□□ 0.87
CHKB-209ENST00000481673 VARS2Q5ST30 1063 aaKnown RBP20.47■□□□□ 0.87
CHKB-209ENST00000481673 CYP4X1Q8N118 509 aa20.47■□□□□ 0.87
CHKB-209ENST00000481673 NUP93Q8N1F7 819 aa20.47■□□□□ 0.87
CHKB-209ENST00000481673 CCNYQ8ND76 341 aa20.47■□□□□ 0.87
CHKB-209ENST00000481673 FBF1Q8TES7 1133 aa20.47■□□□□ 0.87
CHKB-209ENST00000481673 P2RY11Q96G91 374 aa20.47■□□□□ 0.87
CHKB-209ENST00000481673 VAT1Q99536 393 aa20.47■□□□□ 0.87
CHKB-209ENST00000481673 SMOC2Q9H3U7 446 aa20.47■□□□□ 0.87
CHKB-209ENST00000481673 KCNK9Q9NPC2 374 aa20.47■□□□□ 0.87
CHKB-209ENST00000481673 ARHGEF38Q9NXL2 777 aa20.47■□□□□ 0.87
CHKB-209ENST00000481673 DNAJB4Q9UDY4 337 aa20.47■□□□□ 0.87
CHKB-209ENST00000481673 OGDHLQ9ULD0 1010 aa20.47■□□□□ 0.87
CHKB-209ENST00000481673 SCML2Q9UQR0 700 aa20.47■□□□□ 0.87
CHKB-209ENST00000481673 CENPFP49454 3210 aa20.47■□□□□ 0.87
CHKB-209ENST00000481673 COL4A4P53420 1690 aaPredicted RBP20.47■□□□□ 0.87
CHKB-209ENST00000481673 F8W810 466 aa20.47■□□□□ 0.87
CHKB-209ENST00000481673 IRAK2O43187 625 aa20.47■□□□□ 0.87
CHKB-209ENST00000481673 KRT15P19012 456 aa20.47■□□□□ 0.87
CHKB-209ENST00000481673 CCR1P32246 355 aa20.47■□□□□ 0.87
CHKB-209ENST00000481673 MSH2P43246 934 aa20.47■□□□□ 0.87
CHKB-209ENST00000481673 MAGEA3P43357 314 aa20.47■□□□□ 0.87
CHKB-209ENST00000481673 AP1B1Q10567 949 aa20.47■□□□□ 0.87
CHKB-209ENST00000481673 PPP2R5DQ14738 602 aa20.47■□□□□ 0.87
CHKB-209ENST00000481673 GPNMBQ14956 572 aa20.47■□□□□ 0.87
CHKB-209ENST00000481673 CYS1Q717R9 158 aa20.47■□□□□ 0.87
CHKB-209ENST00000481673 CPLX4Q7Z7G2 160 aa20.47■□□□□ 0.87
CHKB-209ENST00000481673 CCNJLQ8IV13 435 aa20.47■□□□□ 0.87
CHKB-209ENST00000481673 SRRM1Q8IYB3 904 aaKnown RBP20.47■□□□□ 0.87
CHKB-209ENST00000481673 SCAMP5Q8TAC9 235 aa20.47■□□□□ 0.87
CHKB-209ENST00000481673 LGMNQ99538 433 aa20.47■□□□□ 0.87
CHKB-209ENST00000481673 UNC93B1Q9H1C4 597 aa20.47■□□□□ 0.87
CHKB-209ENST00000481673 PRDM12Q9H4Q4 367 aa20.47■□□□□ 0.87
CHKB-209ENST00000481673 IKBKGQ9Y6K9 419 aa20.47■□□□□ 0.87
CHKB-209ENST00000481673 FRMPD3Q5JV73 1810 aa20.47■□□□□ 0.87
CHKB-209ENST00000481673 PRPF4O43172 522 aaKnown RBP eCLIP20.46■□□□□ 0.875e-7■■□□□ 13.1
CHKB-209ENST00000481673 METTL18O95568 372 aa20.46■□□□□ 0.87
CHKB-209ENST00000481673 CTXN3Q4LDR2 81 aa20.46■□□□□ 0.87
CHKB-209ENST00000481673 CAND1Q86VP6 1230 aaKnown RBP20.46■□□□□ 0.87
CHKB-209ENST00000481673 NPAS4Q8IUM7 802 aa20.46■□□□□ 0.87
CHKB-209ENST00000481673 SH3TC2Q8TF17 1288 aa20.46■□□□□ 0.87
CHKB-209ENST00000481673 DYDC1Q8WWB3 177 aa20.46■□□□□ 0.87
CHKB-209ENST00000481673 ALKBH8Q96BT7 664 aaKnown RBP20.46■□□□□ 0.87
CHKB-209ENST00000481673 SMC6Q96SB8 1091 aa20.46■□□□□ 0.87
CHKB-209ENST00000481673 COMMD8Q9NX08 183 aa20.46■□□□□ 0.87
CHKB-209ENST00000481673 ABI2Q9NYB9 513 aaPredicted RBP20.46■□□□□ 0.87
CHKB-209ENST00000481673 IGSF9Q9P2J2 1179 aa20.46■□□□□ 0.87
CHKB-209ENST00000481673 CHMP2BQ9UQN3 213 aa20.46■□□□□ 0.87
CHKB-209ENST00000481673 FAM47DPA6NHR8 397 aa20.45■□□□□ 0.86
CHKB-209ENST00000481673 FAM72CH0Y354 149 aa20.45■□□□□ 0.86
CHKB-209ENST00000481673 H7C4K7 107 aa20.45■□□□□ 0.86
CHKB-209ENST00000481673 RNF103O00237 685 aa20.45■□□□□ 0.86
CHKB-209ENST00000481673 SLC2A3P11169 496 aa20.45■□□□□ 0.86
CHKB-209ENST00000481673 FGFR3P22607 806 aa20.45■□□□□ 0.86
CHKB-209ENST00000481673 GBP2P32456 591 aaPredicted RBP20.45■□□□□ 0.86
CHKB-209ENST00000481673 COG7P83436 770 aa20.45■□□□□ 0.86
CHKB-209ENST00000481673 FAM72AQ5TYM5 149 aa20.45■□□□□ 0.86
CHKB-209ENST00000481673 FAM72DQ6L9T8 149 aa20.45■□□□□ 0.86
CHKB-209ENST00000481673 FAM72BQ86X60 149 aa20.45■□□□□ 0.86
CHKB-209ENST00000481673 SCN4BQ8IWT1 228 aa20.45■□□□□ 0.86
CHKB-209ENST00000481673 LZTR1Q8N653 840 aa20.45■□□□□ 0.86
CHKB-209ENST00000481673 COLGALT1Q8NBJ5 622 aa20.45■□□□□ 0.86
CHKB-209ENST00000481673 C2orf15Q8WU43 125 aaKnown RBP20.45■□□□□ 0.86
CHKB-209ENST00000481673 HDAC11Q96DB2 347 aa20.45■□□□□ 0.86
CHKB-209ENST00000481673 SERPINB11Q96P15 392 aa20.45■□□□□ 0.86
CHKB-209ENST00000481673 WDR83Q9BRX9 315 aaKnown RBP20.45■□□□□ 0.86
CHKB-209ENST00000481673 NSRP1Q9H0G5 558 aaKnown RBP20.45■□□□□ 0.86
CHKB-209ENST00000481673 TMPRSS4Q9NRS4 437 aa20.45■□□□□ 0.86
CHKB-209ENST00000481673 ZC3H7BQ9UGR2 993 aaKnown RBP20.45■□□□□ 0.86
CHKB-209ENST00000481673 TRHDEQ9UKU6 1024 aa20.45■□□□□ 0.86
CHKB-209ENST00000481673 BANF1O75531 89 aa20.45■□□□□ 0.86
CHKB-209ENST00000481673 CXCL10P02778 98 aa20.45■□□□□ 0.86
CHKB-209ENST00000481673 VAV1P15498 845 aa20.45■□□□□ 0.86
CHKB-209ENST00000481673 EPHB2P29323 1055 aa20.45■□□□□ 0.86
CHKB-209ENST00000481673 PPIDQ08752 370 aaKnown RBP20.45■□□□□ 0.86
CHKB-209ENST00000481673 ACBD5Q5T8D3 534 aaPredicted RBP20.45■□□□□ 0.86
CHKB-209ENST00000481673 FAM171A1Q5VUB5 890 aa20.45■□□□□ 0.86
CHKB-209ENST00000481673 CAPN12Q6ZSI9 719 aa20.45■□□□□ 0.86
CHKB-209ENST00000481673 ANKRD33Q7Z3H0 272 aa20.45■□□□□ 0.86
CHKB-209ENST00000481673 SPPL2BQ8TCT7 592 aa20.45■□□□□ 0.86
CHKB-209ENST00000481673 ZNF317Q96PQ6 595 aaPredicted RBP20.45■□□□□ 0.86
CHKB-209ENST00000481673 PAFAH2Q99487 392 aa20.45■□□□□ 0.86
CHKB-209ENST00000481673 NAT9Q9BTE0 207 aa20.45■□□□□ 0.86
CHKB-209ENST00000481673 TRABDQ9H4I3 376 aa20.45■□□□□ 0.86
CHKB-209ENST00000481673 IL37Q9NZH6 218 aa20.45■□□□□ 0.86
CHKB-209ENST00000481673 IQANK1A0A1B0GTG1 560 aa20.44■□□□□ 0.86
CHKB-209ENST00000481673 FGF10O15520 208 aaPredicted RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms