RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 TOP1MTQ969P6 601 aa10.94□□□□□ -0.66
SIK3-210ENST00000480468 ACSF2Q96CM8 615 aaPredicted RBP10.94□□□□□ -0.66
SIK3-210ENST00000480468 TMEM79Q9BSE2 394 aa10.94□□□□□ -0.66
SIK3-210ENST00000480468 EHMT1Q9H9B1 1298 aa10.94□□□□□ -0.66
SIK3-210ENST00000480468 UGT1A7Q9HAW7 530 aa10.94□□□□□ -0.66
SIK3-210ENST00000480468 UGT1A10Q9HAW8 530 aa10.94□□□□□ -0.66
SIK3-210ENST00000480468 UGT1A8Q9HAW9 530 aa10.94□□□□□ -0.66
SIK3-210ENST00000480468 TMEM9Q9P0T7 183 aa10.94□□□□□ -0.66
SIK3-210ENST00000480468 DCDC2Q9UHG0 476 aa10.94□□□□□ -0.66
SIK3-210ENST00000480468 ERGIC3Q9Y282 383 aa10.94□□□□□ -0.66
SIK3-210ENST00000480468 IQCA1LA6NCM1 817 aa10.94□□□□□ -0.66
SIK3-210ENST00000480468 H3BMQ9 156 aa10.94□□□□□ -0.66
SIK3-210ENST00000480468 ATE1O95260 518 aa10.94□□□□□ -0.66
SIK3-210ENST00000480468 MCF2P10911 925 aa10.94□□□□□ -0.66
SIK3-210ENST00000480468 CYP2C9P11712 490 aa10.94□□□□□ -0.66
SIK3-210ENST00000480468 YBX3P16989 372 aaKnown RBP eCLIP10.94□□□□□ -0.66
SIK3-210ENST00000480468 PTPN2P17706 415 aa10.94□□□□□ -0.66
SIK3-210ENST00000480468 PIK3R1P27986 724 aa10.94□□□□□ -0.66
SIK3-210ENST00000480468 GABRB3P28472 473 aa10.94□□□□□ -0.66
SIK3-210ENST00000480468 MS4A2Q01362 244 aa10.94□□□□□ -0.66
SIK3-210ENST00000480468 ROR1Q01973 937 aa10.94□□□□□ -0.66
SIK3-210ENST00000480468 ZBTB17Q13105 803 aa10.94□□□□□ -0.66
SIK3-210ENST00000480468 PICALMQ13492 652 aa10.94□□□□□ -0.66
SIK3-210ENST00000480468 CUL2Q13617 745 aa10.94□□□□□ -0.66
SIK3-210ENST00000480468 ZACNQ401N2 412 aa10.94□□□□□ -0.66
SIK3-210ENST00000480468 N4BP2L1Q5TBK1 243 aaPredicted RBP10.94□□□□□ -0.66
SIK3-210ENST00000480468 MROH9Q5TGP6 573 aa10.94□□□□□ -0.66
SIK3-210ENST00000480468 IRAK1BP1Q5VVH5 260 aa10.94□□□□□ -0.66
SIK3-210ENST00000480468 TAB3Q8N5C8 712 aaPredicted RBP10.94□□□□□ -0.66
SIK3-210ENST00000480468 MCUQ8NE86 351 aa10.94□□□□□ -0.66
SIK3-210ENST00000480468 SLC7A3Q8WY07 619 aa10.94□□□□□ -0.66
SIK3-210ENST00000480468 ATP2A3Q93084 1043 aa10.94□□□□□ -0.66
SIK3-210ENST00000480468 ELMO3Q96BJ8 720 aa10.94□□□□□ -0.66
SIK3-210ENST00000480468 FAF2Q96CS3 445 aa10.94□□□□□ -0.66
SIK3-210ENST00000480468 GMCL1Q96IK5 515 aa10.94□□□□□ -0.66
SIK3-210ENST00000480468 CNDP2Q96KP4 475 aaKnown RBP10.94□□□□□ -0.66
SIK3-210ENST00000480468 COG8Q96MW5 612 aa10.94□□□□□ -0.66
SIK3-210ENST00000480468 DCUN1D5Q9BTE7 237 aa10.94□□□□□ -0.66
SIK3-210ENST00000480468 COQ10BQ9H8M1 238 aa10.94□□□□□ -0.66
SIK3-210ENST00000480468 UTP6Q9NYH9 597 aaKnown RBP10.94□□□□□ -0.66
SIK3-210ENST00000480468 PAK5Q9P286 719 aa10.94□□□□□ -0.66
SIK3-210ENST00000480468 PCDHB12Q9Y5F1 795 aa10.94□□□□□ -0.66
SIK3-210ENST00000480468 AIM2O14862 343 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 SNAP91O60641 907 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 AVILO75366 819 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 PTPN1P18031 435 aaKnown RBP10.93□□□□□ -0.66
SIK3-210ENST00000480468 HADHQ16836 314 aaKnown RBP10.93□□□□□ -0.66
SIK3-210ENST00000480468 MFSD14BQ5SR56 506 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 VWA5B1Q5TIE3 1220 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 TATDN1Q6P1N9 297 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 UNC5AQ6ZN44 842 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 MIER3Q7Z3K6 550 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 COLGALT2Q8IYK4 626 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 GPD1LQ8N335 351 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 TMEM161BQ8NDZ6 487 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 GMCL1P1Q8NEA9 526 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 GRIN3AQ8TCU5 1115 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 RTP4Q96DX8 246 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 DUS3LQ96G46 650 aaKnown RBP10.93□□□□□ -0.66
SIK3-210ENST00000480468 KLHL32Q96NJ5 620 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 UHRF1Q96T88 793 aaPredicted RBP10.93□□□□□ -0.66
SIK3-210ENST00000480468 ZNF518BQ9C0D4 1074 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 CDH19Q9H159 772 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 DDX4Q9NQI0 724 aaKnown RBP10.93□□□□□ -0.66
SIK3-210ENST00000480468 TBC1D22BQ9NU19 505 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 NCKIPSDQ9NZQ3 722 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 SLC9A2Q9UBY0 812 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 PCDHB4Q9Y5E5 795 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 COL5A3P25940 1745 aaPredicted RBP10.93□□□□□ -0.66
SIK3-210ENST00000480468 SLC15A5A6NIM6 579 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 AQP9O43315 295 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 STAMBPO95630 424 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 HLA-DRAP01903 254 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 HLA-DOAP06340 250 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 GARTP22102 1010 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 KCNA4P22459 653 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 TBXAS1P24557 533 aaPredicted RBP10.93□□□□□ -0.66
SIK3-210ENST00000480468 NEK2P51955 445 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 PEX3P56589 373 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 NDUFA5Q16718 116 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 MEX3CQ5U5Q3 659 aaKnown RBP10.93□□□□□ -0.66
SIK3-210ENST00000480468 EGFLAMQ63HQ2 1017 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 OGFOD2Q6N063 350 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 TMEM270Q6UE05 265 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 ATG14Q6ZNE5 492 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 CAND1Q86VP6 1230 aaKnown RBP10.93□□□□□ -0.66
SIK3-210ENST00000480468 SNX32Q86XE0 403 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 CPSF7Q8N684 471 aaKnown RBP10.93□□□□□ -0.66
SIK3-210ENST00000480468 FNIP1Q8TF40 1166 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 CCDC138Q96M89 665 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 PSD2Q9BQI7 771 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 SLC4A5Q9BY07 1137 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 ARMC7Q9H6L4 198 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 COG4Q9H9E3 785 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 CXorf21Q9HAI6 301 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 MRPL40Q9NQ50 206 aaKnown RBP10.93□□□□□ -0.66
SIK3-210ENST00000480468 CDC14AQ9UNH5 594 aa10.93□□□□□ -0.66
SIK3-210ENST00000480468 SPDYE2BA6NHP3 402 aa10.92□□□□□ -0.66
SIK3-210ENST00000480468 NOP56O00567 594 aaKnown RBP10.92□□□□□ -0.66
SIK3-210ENST00000480468 KPNA4O00629 521 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms