RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 RAB41Q5JT25 222 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 FAM78AQ5JUQ0 283 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 ACBD5Q5T8D3 534 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-213ENST00000480102 PM20D1Q6GTS8 502 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 PARM1Q6UWI2 310 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 SPATA31D4Q6ZUB0 917 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 GET4Q7L5D6 327 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-213ENST00000480102 CCDC186Q7Z3E2 898 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 TADA2BQ86TJ2 420 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 RALGPS2Q86X27 583 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-213ENST00000480102 IRF2BP1Q8IU81 584 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 HID1Q8IV36 788 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 FMNL3Q8IVF7 1028 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 NUP93Q8N1F7 819 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 ARHGAP18Q8N392 663 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 ANKRD52Q8NB46 1076 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 OR6B3Q8NGW1 331 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 NELFBQ8WX92 580 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 MRPS31Q92665 395 aaKnown RBP5.17□□□□□ -1.58
PTCD3-213ENST00000480102 NELL1Q92832 810 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 MYLPFQ96A32 169 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 RHOVQ96L33 236 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 HSFY1Q96LI6 401 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 SEPT5Q99719 369 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-213ENST00000480102 BPIFA3Q9BQP9 254 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 MRPL45Q9BRJ2 306 aaKnown RBP5.17□□□□□ -1.58
PTCD3-213ENST00000480102 TRIM62Q9BVG3 475 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 DUSP16Q9BY84 665 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 FOXQ1Q9C009 403 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 TGIF2Q9GZN2 237 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 TMLHEQ9NVH6 421 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 ANO10Q9NW15 660 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 THG1LQ9NWX6 298 aaKnown RBP5.17□□□□□ -1.58
PTCD3-213ENST00000480102 TRPM5Q9NZQ8 1165 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 DLGAP2Q9P1A6 1054 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 SCML2Q9UQR0 700 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.17□□□□□ -1.588e-6■■■□□ 18.5
PTCD3-213ENST00000480102 NUMBLQ9Y6R0 609 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 MYO7AQ13402 2215 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 C5orf42Q9H799 3197 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 NLRC5Q86WI3 1866 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 KANSL1LA0AUZ9 987 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 SLC38A8A6NNN8 435 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 F8VP50 259 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 SLC9A3R1O14745 358 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-213ENST00000480102 ZNF263O14978 683 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 TADA3O75528 432 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 SLITRK5O94991 958 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 LATS1O95835 1130 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 OAS1P00973 400 aaKnown RBP5.16□□□□□ -1.58
PTCD3-213ENST00000480102 OR4Q2P0C623 313 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 FAM200BP0CF97 657 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 VDRP11473 427 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 CEBPBP17676 345 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 ITIH2P19823 946 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 ACO1P21399 889 aaKnown RBP5.16□□□□□ -1.58
PTCD3-213ENST00000480102 CYP2F1P24903 491 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 YWHAQP27348 245 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 AVPR1AP37288 418 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 KPNA1P52294 538 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-213ENST00000480102 KIF11P52732 1056 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 NDST1P52848 882 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 SLC5A3P53794 718 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 BCAT1P54687 386 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 RAD23BP54727 409 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 ARPP19P56211 112 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 RPL6Q02878 288 aaKnown RBP5.16□□□□□ -1.58
PTCD3-213ENST00000480102 E2F5Q15329 346 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 TAF12Q16514 161 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 MAN2A1Q16706 1144 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 KLHL40Q2TBA0 621 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 SKOR2Q2VWA4 1001 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-213ENST00000480102 HSF5Q4G112 596 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-213ENST00000480102 FBXO43Q4G163 708 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 CBWD6Q4V339 395 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 SLC44A4Q53GD3 710 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 CBWD3Q5JTY5 395 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 CBWD5Q5RIA9 395 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 CDKAL1Q5VV42 579 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 LMBRD2Q68DH5 695 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-213ENST00000480102 TANGO2Q6ICL3 276 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 LCLAT1Q6UWP7 414 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 ZNF852Q6ZMS4 543 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 ZNF574Q6ZN55 896 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-213ENST00000480102 CBLL1Q75N03 491 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 ARCQ7LC44 396 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 ARID3BQ8IVW6 561 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-213ENST00000480102 CCDC105Q8IYK2 499 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 MFSD2AQ8NA29 543 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 STKLD1Q8NE28 680 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 ZSCAN18Q8TBC5 510 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-213ENST00000480102 BPIFB1Q8TDL5 484 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 OSCP1Q8WVF1 389 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 IRGQQ8WZA9 623 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 CYFIP2Q96F07 1278 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 TMEM176AQ96HP8 235 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 HRASLS5Q96KN8 279 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 NT5C1BQ96P26 610 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 PGLYRP2Q96PD5 576 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 MED15Q96RN5 788 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms