RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 CPT1AP50416 773 aa19.75■□□□□ 0.75
TNFRSF8-204ENST00000479933 POLE2P56282 527 aa19.75■□□□□ 0.75
TNFRSF8-204ENST00000479933 UBXN11Q5T124 520 aa19.75■□□□□ 0.75
TNFRSF8-204ENST00000479933 FAXCQ5TGI0 409 aa19.75■□□□□ 0.75
TNFRSF8-204ENST00000479933 FOXB2Q5VYV0 432 aa19.75■□□□□ 0.75
TNFRSF8-204ENST00000479933 PRPF39Q86UA1 669 aaKnown RBP19.75■□□□□ 0.75
TNFRSF8-204ENST00000479933 LCA5Q86VQ0 697 aa19.75■□□□□ 0.75
TNFRSF8-204ENST00000479933 TRIM42Q8IWZ5 723 aa19.75■□□□□ 0.75
TNFRSF8-204ENST00000479933 NME8Q8N427 588 aa19.75■□□□□ 0.75
TNFRSF8-204ENST00000479933 FAM13CQ8NE31 585 aa19.75■□□□□ 0.75
TNFRSF8-204ENST00000479933 GSDMBQ8TAX9 411 aa19.75■□□□□ 0.75
TNFRSF8-204ENST00000479933 TFB1MQ8WVM0 346 aaKnown RBP19.75■□□□□ 0.75
TNFRSF8-204ENST00000479933 EBNA1BP2Q99848 306 aaKnown RBP19.75■□□□□ 0.75
TNFRSF8-204ENST00000479933 TRIM55Q9BYV6 548 aa19.75■□□□□ 0.75
TNFRSF8-204ENST00000479933 KLK14Q9P0G3 267 aa19.75■□□□□ 0.75
TNFRSF8-204ENST00000479933 GJD2Q9UKL4 321 aa19.75■□□□□ 0.75
TNFRSF8-204ENST00000479933 TRAFD1O14545 582 aaPredicted RBP19.74■□□□□ 0.75
TNFRSF8-204ENST00000479933 STK10O94804 968 aaKnown RBP19.74■□□□□ 0.75
TNFRSF8-204ENST00000479933 SERPINB9P50453 376 aa19.74■□□□□ 0.75
TNFRSF8-204ENST00000479933 SLC10A2Q12908 348 aaPredicted RBP19.74■□□□□ 0.75
TNFRSF8-204ENST00000479933 SPRYD7Q5W111 196 aa19.74■□□□□ 0.75
TNFRSF8-204ENST00000479933 CYS1Q717R9 158 aa19.74■□□□□ 0.75
TNFRSF8-204ENST00000479933 B3GALNT2Q8NCR0 500 aa19.74■□□□□ 0.75
TNFRSF8-204ENST00000479933 TSSK1BQ9BXA7 367 aa19.74■□□□□ 0.75
TNFRSF8-204ENST00000479933 DUSP16Q9BY84 665 aa19.74■□□□□ 0.75
TNFRSF8-204ENST00000479933 VCX3BQ9H321 246 aa19.74■□□□□ 0.75
TNFRSF8-204ENST00000479933 SUDS3Q9H7L9 328 aaPredicted RBP19.74■□□□□ 0.75
TNFRSF8-204ENST00000479933 DCLRE1BQ9H816 532 aa19.74■□□□□ 0.75
TNFRSF8-204ENST00000479933 VCX3AQ9NNX9 186 aa19.74■□□□□ 0.75
TNFRSF8-204ENST00000479933 MKS1Q9NXB0 559 aa19.74■□□□□ 0.75
TNFRSF8-204ENST00000479933 STOML1Q9UBI4 398 aa19.74■□□□□ 0.75
TNFRSF8-204ENST00000479933 FZD10Q9ULW2 581 aa19.74■□□□□ 0.75
TNFRSF8-204ENST00000479933 WDR91A4D1P6 747 aa19.73■□□□□ 0.75
TNFRSF8-204ENST00000479933 EIF4E1BA6NMX2 242 aaKnown RBP19.73■□□□□ 0.75
TNFRSF8-204ENST00000479933 TRIM49D1C9J1S8 452 aa19.73■□□□□ 0.75
TNFRSF8-204ENST00000479933 KLF11O14901 512 aa19.73■□□□□ 0.75
TNFRSF8-204ENST00000479933 NVLO15381 856 aaKnown RBP19.73■□□□□ 0.75
TNFRSF8-204ENST00000479933 HCRTO43612 131 aa19.73■□□□□ 0.75
TNFRSF8-204ENST00000479933 DGKIO75912 1065 aa19.73■□□□□ 0.75
TNFRSF8-204ENST00000479933 METTL18O95568 372 aa19.73■□□□□ 0.75
TNFRSF8-204ENST00000479933 MLNP12872 115 aa19.73■□□□□ 0.75
TNFRSF8-204ENST00000479933 VHLP40337 213 aa19.73■□□□□ 0.75
TNFRSF8-204ENST00000479933 NCBP2-AS2Q69YL0 99 aa19.73■□□□□ 0.75
TNFRSF8-204ENST00000479933 NLRP9Q7RTR0 991 aa19.73■□□□□ 0.75
TNFRSF8-204ENST00000479933 CCDC185Q8N715 623 aa19.73■□□□□ 0.75
TNFRSF8-204ENST00000479933 SIGLEC10Q96LC7 697 aa19.73■□□□□ 0.75
TNFRSF8-204ENST00000479933 KATNAL1Q9BW62 490 aa19.73■□□□□ 0.75
TNFRSF8-204ENST00000479933 UBE2OQ9C0C9 1292 aaKnown RBP19.73■□□□□ 0.75
TNFRSF8-204ENST00000479933 NPHS2Q9NP85 383 aa19.73■□□□□ 0.75
TNFRSF8-204ENST00000479933 SAR1AQ9NR31 198 aa19.73■□□□□ 0.75
TNFRSF8-204ENST00000479933 DTLQ9NZJ0 730 aa19.73■□□□□ 0.75
TNFRSF8-204ENST00000479933 GMEB1Q9Y692 573 aa19.73■□□□□ 0.75
TNFRSF8-204ENST00000479933 USP3Q9Y6I4 520 aa19.73■□□□□ 0.75
TNFRSF8-204ENST00000479933 SF3B1O75533 1304 aaKnown RBP eCLIP19.73■□□□□ 0.75
TNFRSF8-204ENST00000479933 H3BRJ5 948 aa19.73■□□□□ 0.75
TNFRSF8-204ENST00000479933 HGSO14964 777 aaPredicted RBP19.73■□□□□ 0.75
TNFRSF8-204ENST00000479933 MAP3K6O95382 1288 aa19.73■□□□□ 0.75
TNFRSF8-204ENST00000479933 SKIP12755 728 aa19.73■□□□□ 0.75
TNFRSF8-204ENST00000479933 GM2AP17900 193 aa19.73■□□□□ 0.75
TNFRSF8-204ENST00000479933 SULT1E1P49888 294 aa19.73■□□□□ 0.75
TNFRSF8-204ENST00000479933 LILRA4P59901 499 aa19.73■□□□□ 0.75
TNFRSF8-204ENST00000479933 MAP2K5Q13163 448 aa19.73■□□□□ 0.75
TNFRSF8-204ENST00000479933 MUM1Q2TAK8 710 aa19.73■□□□□ 0.75
TNFRSF8-204ENST00000479933 MORN1Q5T089 497 aa19.73■□□□□ 0.75
TNFRSF8-204ENST00000479933 C1QTNF12Q5T7M4 302 aa19.73■□□□□ 0.75
TNFRSF8-204ENST00000479933 UNC5AQ6ZN44 842 aa19.73■□□□□ 0.75
TNFRSF8-204ENST00000479933 HTR3CQ8WXA8 447 aa19.73■□□□□ 0.75
TNFRSF8-204ENST00000479933 KCTD13Q8WZ19 329 aa19.73■□□□□ 0.75
TNFRSF8-204ENST00000479933 OLFM3Q96PB7 478 aa19.73■□□□□ 0.75
TNFRSF8-204ENST00000479933 FAM111AQ96PZ2 611 aa19.73■□□□□ 0.75
TNFRSF8-204ENST00000479933 A0A0A0MRY4 1105 aa19.72■□□□□ 0.75
TNFRSF8-204ENST00000479933 MAGEA13PA6NCF6 341 aa19.72■□□□□ 0.75
TNFRSF8-204ENST00000479933 FAM159BA6NKW6 160 aa19.72■□□□□ 0.75
TNFRSF8-204ENST00000479933 CNTFP26441 200 aa19.72■□□□□ 0.75
TNFRSF8-204ENST00000479933 LRPAP1P30533 357 aa19.72■□□□□ 0.75
TNFRSF8-204ENST00000479933 NOS2P35228 1153 aa19.72■□□□□ 0.75
TNFRSF8-204ENST00000479933 ATXN1P54253 815 aaKnown RBP19.72■□□□□ 0.75
TNFRSF8-204ENST00000479933 MYBPC3Q14896 1274 aa19.72■□□□□ 0.75
TNFRSF8-204ENST00000479933 PIGZQ86VD9 579 aa19.72■□□□□ 0.75
TNFRSF8-204ENST00000479933 DEFB106AQ8N104 65 aa19.72■□□□□ 0.75
TNFRSF8-204ENST00000479933 TMEM40Q8WWA1 233 aa19.72■□□□□ 0.75
TNFRSF8-204ENST00000479933 LZICQ8WZA0 190 aa19.72■□□□□ 0.75
TNFRSF8-204ENST00000479933 UPF1Q92900 1129 aaKnown RBP eCLIP19.72■□□□□ 0.75
TNFRSF8-204ENST00000479933 SPATA13Q96N96 652 aa19.72■□□□□ 0.75
TNFRSF8-204ENST00000479933 TUBB6Q9BUF5 446 aa19.72■□□□□ 0.75
TNFRSF8-204ENST00000479933 TLE6Q9H808 572 aa19.72■□□□□ 0.75
TNFRSF8-204ENST00000479933 STAP1Q9ULZ2 295 aa19.72■□□□□ 0.75
TNFRSF8-204ENST00000479933 IPPQ9Y573 584 aa19.72■□□□□ 0.75
TNFRSF8-204ENST00000479933 PCDHA11Q9Y5I1 949 aa19.72■□□□□ 0.75
TNFRSF8-204ENST00000479933 MAD1L1Q9Y6D9 718 aa19.72■□□□□ 0.75
TNFRSF8-204ENST00000479933 AMPD1P23109 780 aa19.72■□□□□ 0.75
TNFRSF8-204ENST00000479933 CCNFP41002 786 aa19.72■□□□□ 0.75
TNFRSF8-204ENST00000479933 SOX4Q06945 474 aaPredicted RBP19.72■□□□□ 0.75
TNFRSF8-204ENST00000479933 SFSWAPQ12872 951 aaKnown RBP19.72■□□□□ 0.75
TNFRSF8-204ENST00000479933 GSTA3Q16772 222 aa19.72■□□□□ 0.75
TNFRSF8-204ENST00000479933 ZNF534Q76KX8 674 aa19.72■□□□□ 0.75
TNFRSF8-204ENST00000479933 SRPK1Q96SB4 655 aaKnown RBP19.72■□□□□ 0.75
TNFRSF8-204ENST00000479933 AP5M1Q9H0R1 490 aa19.72■□□□□ 0.75
TNFRSF8-204ENST00000479933 RNF39Q9H2S5 420 aa19.72■□□□□ 0.75
TNFRSF8-204ENST00000479933 EIF2B3Q9NR50 452 aaKnown RBP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms