RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 PHF24Q9UPV7 400 aa13.72□□□□□ -0.21
PDZRN3-208ENST00000479530 POMPQ9Y244 141 aa13.72□□□□□ -0.21
PDZRN3-208ENST00000479530 MAD1L1Q9Y6D9 718 aa13.72□□□□□ -0.21
PDZRN3-208ENST00000479530 MGAMO43451 1857 aa13.72□□□□□ -0.21
PDZRN3-208ENST00000479530 MYOCOSA0A1B0GUC4 107 aa13.72□□□□□ -0.21
PDZRN3-208ENST00000479530 H3BNX3 289 aa13.72□□□□□ -0.21
PDZRN3-208ENST00000479530 SMIM18P0DKX4 95 aa13.72□□□□□ -0.21
PDZRN3-208ENST00000479530 COPAP53621 1224 aa13.72□□□□□ -0.21
PDZRN3-208ENST00000479530 MBLAC2Q68D91 279 aa13.72□□□□□ -0.21
PDZRN3-208ENST00000479530 DEFB107AQ8IZN7 70 aa13.72□□□□□ -0.21
PDZRN3-208ENST00000479530 PHTF2Q8N3S3 785 aa13.72□□□□□ -0.21
PDZRN3-208ENST00000479530 PPP1R14CQ8TAE6 165 aa13.72□□□□□ -0.21
PDZRN3-208ENST00000479530 PIWIL2Q8TC59 973 aaKnown RBP13.72□□□□□ -0.21
PDZRN3-208ENST00000479530 ATXN10Q9UBB4 475 aa13.72□□□□□ -0.21
PDZRN3-208ENST00000479530 NR2E3Q9Y5X4 410 aa13.72□□□□□ -0.21
PDZRN3-208ENST00000479530 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.71□□□□□ -0.21
PDZRN3-208ENST00000479530 PPEF2O14830 753 aa13.71□□□□□ -0.21
PDZRN3-208ENST00000479530 C22orf31O95567 290 aa13.71□□□□□ -0.21
PDZRN3-208ENST00000479530 FGF3P11487 239 aaPredicted RBP13.71□□□□□ -0.21
PDZRN3-208ENST00000479530 TFE3P19532 575 aaPredicted RBP13.71□□□□□ -0.21
PDZRN3-208ENST00000479530 L1CAMP32004 1257 aa13.71□□□□□ -0.21
PDZRN3-208ENST00000479530 CRHR1P34998 444 aa13.71□□□□□ -0.21
PDZRN3-208ENST00000479530 NDST1P52848 882 aa13.71□□□□□ -0.21
PDZRN3-208ENST00000479530 FOLH1Q04609 750 aa13.71□□□□□ -0.21
PDZRN3-208ENST00000479530 GK3PQ14409 553 aa13.71□□□□□ -0.21
PDZRN3-208ENST00000479530 R3HDM1Q15032 1099 aaKnown RBP13.71□□□□□ -0.21
PDZRN3-208ENST00000479530 TLR1Q15399 786 aa13.71□□□□□ -0.21
PDZRN3-208ENST00000479530 TBCCQ15814 346 aa13.71□□□□□ -0.21
PDZRN3-208ENST00000479530 PAOXQ6QHF9 649 aa13.71□□□□□ -0.21
PDZRN3-208ENST00000479530 FRMD7Q6ZUT3 714 aa13.71□□□□□ -0.21
PDZRN3-208ENST00000479530 ILDR2Q71H61 639 aa13.71□□□□□ -0.21
PDZRN3-208ENST00000479530 PLPPR4Q7Z2D5 763 aa13.71□□□□□ -0.21
PDZRN3-208ENST00000479530 HIC2Q96JB3 615 aa13.71□□□□□ -0.21
PDZRN3-208ENST00000479530 HSFX1Q9UBD0 423 aa13.71□□□□□ -0.21
PDZRN3-208ENST00000479530 TNFSF13BQ9Y275 285 aa13.71□□□□□ -0.21
PDZRN3-208ENST00000479530 CSADQ9Y600 493 aa13.71□□□□□ -0.21
PDZRN3-208ENST00000479530 C15orf38-AP3S2A0A0A6YYH1 394 aa13.71□□□□□ -0.21
PDZRN3-208ENST00000479530 E2F8A0AVK6 867 aa13.71□□□□□ -0.21
PDZRN3-208ENST00000479530 F5H423 210 aaPredicted RBP13.71□□□□□ -0.21
PDZRN3-208ENST00000479530 PIM1P11309 404 aaPredicted RBP13.71□□□□□ -0.21
PDZRN3-208ENST00000479530 ARF4P18085 180 aaPredicted RBP13.71□□□□□ -0.21
PDZRN3-208ENST00000479530 USP46P62068 366 aa13.71□□□□□ -0.21
PDZRN3-208ENST00000479530 CA9Q16790 459 aa13.71□□□□□ -0.21
PDZRN3-208ENST00000479530 GRAMD1BQ3KR37 738 aa13.71□□□□□ -0.21
PDZRN3-208ENST00000479530 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.71□□□□□ -0.21
PDZRN3-208ENST00000479530 ZNF534Q76KX8 674 aa13.71□□□□□ -0.21
PDZRN3-208ENST00000479530 ARPINQ7Z6K5 226 aa13.71□□□□□ -0.21
PDZRN3-208ENST00000479530 TFB1MQ8WVM0 346 aaKnown RBP13.71□□□□□ -0.21
PDZRN3-208ENST00000479530 RXFP2Q8WXD0 754 aa13.71□□□□□ -0.21
PDZRN3-208ENST00000479530 ADPGKQ9BRR6 497 aa13.71□□□□□ -0.21
PDZRN3-208ENST00000479530 C2orf40Q9H1Z8 148 aa13.71□□□□□ -0.21
PDZRN3-208ENST00000479530 PDZD7Q9H5P4 517 aa13.71□□□□□ -0.21
PDZRN3-208ENST00000479530 UBAP1Q9NZ09 502 aa13.71□□□□□ -0.21
PDZRN3-208ENST00000479530 LTBP3Q9NS15 1303 aa13.71□□□□□ -0.22
PDZRN3-208ENST00000479530 hCG_2014768A0A024R1R8 64 aa13.71□□□□□ -0.22
PDZRN3-208ENST00000479530 VILLO15195 856 aa13.71□□□□□ -0.22
PDZRN3-208ENST00000479530 ADCY6O43306 1168 aa13.71□□□□□ -0.22
PDZRN3-208ENST00000479530 HNRNPRO43390 633 aaKnown RBP13.71□□□□□ -0.22
PDZRN3-208ENST00000479530 COQ9O75208 318 aa13.71□□□□□ -0.22
PDZRN3-208ENST00000479530 GABBR2O75899 941 aa13.71□□□□□ -0.22
PDZRN3-208ENST00000479530 KRT38O76015 456 aa13.71□□□□□ -0.22
PDZRN3-208ENST00000479530 PFKMP08237 780 aa13.71□□□□□ -0.22
PDZRN3-208ENST00000479530 ZNF286BP0CG31 522 aa13.71□□□□□ -0.22
PDZRN3-208ENST00000479530 ITGAXP20702 1163 aa13.71□□□□□ -0.22
PDZRN3-208ENST00000479530 SLC1A6P48664 564 aa13.71□□□□□ -0.22
PDZRN3-208ENST00000479530 CHN2P52757 468 aa13.71□□□□□ -0.22
PDZRN3-208ENST00000479530 OR6B2Q6IFH4 312 aa13.71□□□□□ -0.22
PDZRN3-208ENST00000479530 FAM183BPQ6ZVS7 135 aa13.71□□□□□ -0.22
PDZRN3-208ENST00000479530 TMC7Q7Z402 723 aa13.71□□□□□ -0.22
PDZRN3-208ENST00000479530 NME8Q8N427 588 aa13.71□□□□□ -0.22
PDZRN3-208ENST00000479530 METTL25Q8N6Q8 603 aa13.71□□□□□ -0.22
PDZRN3-208ENST00000479530 KLHL23Q8NBE8 558 aa13.71□□□□□ -0.22
PDZRN3-208ENST00000479530 FNIP1Q8TF40 1166 aa13.71□□□□□ -0.22
PDZRN3-208ENST00000479530 MCRS1Q96EZ8 462 aa13.71□□□□□ -0.22
PDZRN3-208ENST00000479530 HPDLQ96IR7 371 aa13.71□□□□□ -0.22
PDZRN3-208ENST00000479530 B3GNT5Q9BYG0 378 aa13.71□□□□□ -0.22
PDZRN3-208ENST00000479530 RSAD1Q9HA92 442 aa13.71□□□□□ -0.22
PDZRN3-208ENST00000479530 PIH1D1Q9NWS0 290 aaKnown RBP13.71□□□□□ -0.22
PDZRN3-208ENST00000479530 INPP5FQ9Y2H2 1132 aa13.71□□□□□ -0.22
PDZRN3-208ENST00000479530 NME7Q9Y5B8 376 aa13.71□□□□□ -0.22
PDZRN3-208ENST00000479530 BRCA2P51587 3418 aa13.7□□□□□ -0.22
PDZRN3-208ENST00000479530 EVPLQ92817 2033 aa13.7□□□□□ -0.22
PDZRN3-208ENST00000479530 PAPPA2Q9BXP8 1791 aa13.7□□□□□ -0.22
PDZRN3-208ENST00000479530 SF3B1O75533 1304 aaKnown RBP eCLIP13.7□□□□□ -0.22
PDZRN3-208ENST00000479530 A0A0G2JLL6 359 aaPredicted RBP13.7□□□□□ -0.22
PDZRN3-208ENST00000479530 METTL18O95568 372 aa13.7□□□□□ -0.22
PDZRN3-208ENST00000479530 HMGCRP04035 888 aa13.7□□□□□ -0.22
PDZRN3-208ENST00000479530 ASLP04424 464 aa13.7□□□□□ -0.22
PDZRN3-208ENST00000479530 PDGFRAP16234 1089 aa13.7□□□□□ -0.22
PDZRN3-208ENST00000479530 IL4RP24394 825 aa13.7□□□□□ -0.22
PDZRN3-208ENST00000479530 IDH3AP50213 366 aa13.7□□□□□ -0.22
PDZRN3-208ENST00000479530 SCNN1BP51168 640 aa13.7□□□□□ -0.22
PDZRN3-208ENST00000479530 ATXN1P54253 815 aaKnown RBP13.7□□□□□ -0.22
PDZRN3-208ENST00000479530 BTKQ06187 659 aa13.7□□□□□ -0.22
PDZRN3-208ENST00000479530 SURF1Q15526 300 aa13.7□□□□□ -0.22
PDZRN3-208ENST00000479530 ANKRD20A4Q4UJ75 823 aa13.7□□□□□ -0.22
PDZRN3-208ENST00000479530 N4BP2L1Q5TBK1 243 aaPredicted RBP13.7□□□□□ -0.22
PDZRN3-208ENST00000479530 LGSNQ5TDP6 509 aa13.7□□□□□ -0.22
PDZRN3-208ENST00000479530 SCYL2Q6P3W7 929 aa13.7□□□□□ -0.22
PDZRN3-208ENST00000479530 PRRT2Q7Z6L0 340 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms