RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 GFRA2O00451 464 aa18.09■□□□□ 0.49
ECHDC1-216ENST00000479525 P4HA2O15460 535 aa18.09■□□□□ 0.49
ECHDC1-216ENST00000479525 THAP12O43422 761 aa18.09■□□□□ 0.49
ECHDC1-216ENST00000479525 SYNCRIPO60506 623 aaKnown RBP18.09■□□□□ 0.49
ECHDC1-216ENST00000479525 PMLP29590 882 aa18.09■□□□□ 0.49
ECHDC1-216ENST00000479525 GPD2P43304 727 aa18.09■□□□□ 0.49
ECHDC1-216ENST00000479525 GCNT1Q02742 428 aa18.09■□□□□ 0.49
ECHDC1-216ENST00000479525 TAF5Q15542 800 aa18.09■□□□□ 0.49
ECHDC1-216ENST00000479525 ADGRF1Q5T601 910 aa18.09■□□□□ 0.49
ECHDC1-216ENST00000479525 SYPL2Q5VXT5 272 aa18.09■□□□□ 0.49
ECHDC1-216ENST00000479525 MMS22LQ6ZRQ5 1243 aa18.09■□□□□ 0.49
ECHDC1-216ENST00000479525 TAC4Q86UU9 113 aa18.09■□□□□ 0.49
ECHDC1-216ENST00000479525 SIPA1Q96FS4 1042 aa18.09■□□□□ 0.49
ECHDC1-216ENST00000479525 NUCKS1Q9H1E3 243 aaKnown RBP18.09■□□□□ 0.49
ECHDC1-216ENST00000479525 MIR1-1HGQ9H1L0 117 aa18.09■□□□□ 0.49
ECHDC1-216ENST00000479525 KIAA1468Q9P260 1216 aa18.09■□□□□ 0.49
ECHDC1-216ENST00000479525 GGA2Q9UJY4 613 aa18.09■□□□□ 0.49
ECHDC1-216ENST00000479525 SPEGQ15772 3267 aa18.09■□□□□ 0.49
ECHDC1-216ENST00000479525 CHD8Q9HCK8 2581 aa18.09■□□□□ 0.49
ECHDC1-216ENST00000479525 SYNJ2BP-COX16A0A087WUM0 186 aa18.08■□□□□ 0.49
ECHDC1-216ENST00000479525 BECN2A8MW95 431 aa18.08■□□□□ 0.49
ECHDC1-216ENST00000479525 ACSL4O60488 711 aa18.08■□□□□ 0.49
ECHDC1-216ENST00000479525 ZNF217O75362 1048 aa18.08■□□□□ 0.49
ECHDC1-216ENST00000479525 IGLV3-27P01718 113 aa18.08■□□□□ 0.49
ECHDC1-216ENST00000479525 GNA15P30679 374 aa18.08■□□□□ 0.49
ECHDC1-216ENST00000479525 TPMTP51580 245 aa18.08■□□□□ 0.49
ECHDC1-216ENST00000479525 MARSP56192 900 aaKnown RBP18.08■□□□□ 0.49
ECHDC1-216ENST00000479525 RPS24P62847 133 aaKnown RBP18.08■□□□□ 0.49
ECHDC1-216ENST00000479525 DUOXA1Q1HG43 343 aa18.08■□□□□ 0.49
ECHDC1-216ENST00000479525 PIK3R6Q5UE93 754 aa18.08■□□□□ 0.49
ECHDC1-216ENST00000479525 SLC23A3Q6PIS1 610 aa18.08■□□□□ 0.49
ECHDC1-216ENST00000479525 ADIPOR2Q86V24 386 aa18.08■□□□□ 0.49
ECHDC1-216ENST00000479525 IRF2BP1Q8IU81 584 aa18.08■□□□□ 0.49
ECHDC1-216ENST00000479525 FCRL2Q96LA5 508 aaPredicted RBP18.08■□□□□ 0.49
ECHDC1-216ENST00000479525 COX16Q9P0S2 106 aa18.08■□□□□ 0.49
ECHDC1-216ENST00000479525 SLCO1B1Q9Y6L6 691 aa18.08■□□□□ 0.49
ECHDC1-216ENST00000479525 SPAARA0A1B0GVQ0 90 aa18.07■□□□□ 0.48
ECHDC1-216ENST00000479525 MEI4A8MW99 385 aa18.07■□□□□ 0.48
ECHDC1-216ENST00000479525 PAPSS1O43252 624 aaPredicted RBP18.07■□□□□ 0.48
ECHDC1-216ENST00000479525 GRAP2O75791 330 aa18.07■□□□□ 0.48
ECHDC1-216ENST00000479525 GNA14O95837 355 aa18.07■□□□□ 0.48
ECHDC1-216ENST00000479525 PABPC1P11940 636 aaKnown RBP18.07■□□□□ 0.48
ECHDC1-216ENST00000479525 CD6P30203 668 aa18.07■□□□□ 0.48
ECHDC1-216ENST00000479525 ATXN3P54252 364 aaPredicted RBP18.07■□□□□ 0.48
ECHDC1-216ENST00000479525 UBE2HP62256 183 aa18.07■□□□□ 0.48
ECHDC1-216ENST00000479525 ENPP2Q13822 863 aa18.07■□□□□ 0.48
ECHDC1-216ENST00000479525 PEAR1Q5VY43 1037 aaPredicted RBP18.07■□□□□ 0.48
ECHDC1-216ENST00000479525 MBLAC2Q68D91 279 aa18.07■□□□□ 0.48
ECHDC1-216ENST00000479525 TRIM65Q6PJ69 517 aa18.07■□□□□ 0.48
ECHDC1-216ENST00000479525 SCML4Q8N228 414 aa18.07■□□□□ 0.48
ECHDC1-216ENST00000479525 CARNMT1Q8N4J0 409 aa18.07■□□□□ 0.48
ECHDC1-216ENST00000479525 ZCCHC9Q8N567 271 aaKnown RBP18.07■□□□□ 0.48
ECHDC1-216ENST00000479525 MINDY1Q8N5J2 469 aa18.07■□□□□ 0.48
ECHDC1-216ENST00000479525 ZNF606Q8WXB4 792 aa18.07■□□□□ 0.48
ECHDC1-216ENST00000479525 IRGQQ8WZA9 623 aa18.07■□□□□ 0.48
ECHDC1-216ENST00000479525 PRCCQ92733 491 aaPredicted RBP18.07■□□□□ 0.48
ECHDC1-216ENST00000479525 GOLGA1Q92805 767 aa18.07■□□□□ 0.48
ECHDC1-216ENST00000479525 HSFY1Q96LI6 401 aa18.07■□□□□ 0.48
ECHDC1-216ENST00000479525 CAPN10Q9HC96 672 aa18.07■□□□□ 0.48
ECHDC1-216ENST00000479525 WSB2Q9NYS7 404 aaPredicted RBP18.07■□□□□ 0.48
ECHDC1-216ENST00000479525 USP36Q9P275 1121 aaKnown RBP18.07■□□□□ 0.48
ECHDC1-216ENST00000479525 ANGPTL2Q9UKU9 493 aa18.07■□□□□ 0.48
ECHDC1-216ENST00000479525 SLC6A14Q9UN76 642 aa18.07■□□□□ 0.48
ECHDC1-216ENST00000479525 ACACBO00763 2458 aa18.07■□□□□ 0.48
ECHDC1-216ENST00000479525 FAM193AP78312 1265 aa18.06■□□□□ 0.48
ECHDC1-216ENST00000479525 GFPT1Q06210 699 aaPredicted RBP18.06■□□□□ 0.48
ECHDC1-216ENST00000479525 LMAN2Q12907 356 aa18.06■□□□□ 0.48
ECHDC1-216ENST00000479525 STILQ15468 1287 aa18.06■□□□□ 0.48
ECHDC1-216ENST00000479525 PTPRNQ16849 979 aa18.06■□□□□ 0.48
ECHDC1-216ENST00000479525 PLEKHG6Q3KR16 790 aa18.06■□□□□ 0.48
ECHDC1-216ENST00000479525 DCAF12L1Q5VU92 463 aa18.06■□□□□ 0.48
ECHDC1-216ENST00000479525 CIR1Q86X95 450 aaPredicted RBP18.06■□□□□ 0.48
ECHDC1-216ENST00000479525 SNX19Q92543 992 aa18.06■□□□□ 0.48
ECHDC1-216ENST00000479525 CAMK1GQ96NX5 476 aa18.06■□□□□ 0.48
ECHDC1-216ENST00000479525 SLC2A11Q9BYW1 496 aa18.06■□□□□ 0.48
ECHDC1-216ENST00000479525 PLCB1Q9NQ66 1216 aa18.06■□□□□ 0.48
ECHDC1-216ENST00000479525 RWDD2AQ9UIY3 292 aa18.06■□□□□ 0.48
ECHDC1-216ENST00000479525 STOML2Q9UJZ1 356 aa18.06■□□□□ 0.48
ECHDC1-216ENST00000479525 PCNX2A6NKB5 2137 aa18.06■□□□□ 0.48
ECHDC1-216ENST00000479525 CACNA1EQ15878 2313 aa18.06■□□□□ 0.48
ECHDC1-216ENST00000479525 WDFY3Q8IZQ1 3526 aa18.05■□□□□ 0.48
ECHDC1-216ENST00000479525 FBXO21O94952 628 aa18.05■□□□□ 0.48
ECHDC1-216ENST00000479525 SERPINF2P08697 491 aa18.05■□□□□ 0.48
ECHDC1-216ENST00000479525 ACADMP11310 421 aa18.05■□□□□ 0.48
ECHDC1-216ENST00000479525 GGCXP38435 758 aa18.05■□□□□ 0.48
ECHDC1-216ENST00000479525 CTSOP43234 321 aaPredicted RBP18.05■□□□□ 0.48
ECHDC1-216ENST00000479525 MTIF2P46199 727 aaKnown RBP18.05■□□□□ 0.48
ECHDC1-216ENST00000479525 ZC3H12AQ5D1E8 599 aaKnown RBP18.05■□□□□ 0.48
ECHDC1-216ENST00000479525 FSCBQ5H9T9 825 aa18.05■□□□□ 0.48
ECHDC1-216ENST00000479525 SPDYCQ5MJ68 293 aa18.05■□□□□ 0.48
ECHDC1-216ENST00000479525 RAP1GAP2Q684P5 730 aa18.05■□□□□ 0.48
ECHDC1-216ENST00000479525 MFN1Q8IWA4 741 aa18.05■□□□□ 0.48
ECHDC1-216ENST00000479525 ZNF419Q96HQ0 510 aaPredicted RBP18.05■□□□□ 0.48
ECHDC1-216ENST00000479525 ITM2CQ9NQX7 267 aa18.05■□□□□ 0.48
ECHDC1-216ENST00000479525 INTS6Q9UL03 887 aaKnown RBP18.05■□□□□ 0.48
ECHDC1-216ENST00000479525 CNTN6Q9UQ52 1028 aa18.05■□□□□ 0.48
ECHDC1-216ENST00000479525 CAPN9O14815 690 aa18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 SLC11A2P49281 568 aa18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 EIF4HQ15056 248 aaKnown RBP18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 ST3GAL2Q16842 350 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms