RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 TMEM86AQ8N2M4 240 aa14.7□□□□□ -0.06
COL20A1-206ENST00000479501 BRD8Q9H0E9 1235 aa14.7□□□□□ -0.06
COL20A1-206ENST00000479501 CAAP1Q9H8G2 361 aa14.7□□□□□ -0.06
COL20A1-206ENST00000479501 TRHDEQ9UKU6 1024 aa14.7□□□□□ -0.06
COL20A1-206ENST00000479501 H0Y626 953 aa14.7□□□□□ -0.06
COL20A1-206ENST00000479501 TRIM16O95361 564 aa14.7□□□□□ -0.06
COL20A1-206ENST00000479501 DRD4P21917 467 aa14.7□□□□□ -0.06
COL20A1-206ENST00000479501 SLC11A2P49281 568 aa14.7□□□□□ -0.06
COL20A1-206ENST00000479501 MTFR1Q15390 333 aa14.7□□□□□ -0.06
COL20A1-206ENST00000479501 RBBP7Q16576 425 aa14.7□□□□□ -0.06
COL20A1-206ENST00000479501 C16orf89Q6UX73 402 aa14.7□□□□□ -0.06
COL20A1-206ENST00000479501 C1orf127Q8N9H9 656 aa14.7□□□□□ -0.06
COL20A1-206ENST00000479501 PIAS1O75925 651 aa14.69□□□□□ -0.06
COL20A1-206ENST00000479501 CYP1A1P04798 512 aaPredicted RBP14.69□□□□□ -0.06
COL20A1-206ENST00000479501 IRF1P10914 325 aa14.69□□□□□ -0.06
COL20A1-206ENST00000479501 ALDH7A1P49419 539 aaKnown RBP14.69□□□□□ -0.06
COL20A1-206ENST00000479501 INPP5AQ14642 412 aa14.69□□□□□ -0.06
COL20A1-206ENST00000479501 DUSP28Q4G0W2 176 aa14.69□□□□□ -0.06
COL20A1-206ENST00000479501 MRNIPQ6NTE8 343 aa14.69□□□□□ -0.06
COL20A1-206ENST00000479501 CES3Q6UWW8 571 aa14.69□□□□□ -0.06
COL20A1-206ENST00000479501 B3GALNT2Q8NCR0 500 aa14.69□□□□□ -0.06
COL20A1-206ENST00000479501 EFR3BQ9Y2G0 817 aa14.69□□□□□ -0.06
COL20A1-206ENST00000479501 DTNAQ9Y4J8 743 aa14.69□□□□□ -0.06
COL20A1-206ENST00000479501 GPR25O00155 361 aa14.69□□□□□ -0.06
COL20A1-206ENST00000479501 USP12O75317 370 aa14.69□□□□□ -0.06
COL20A1-206ENST00000479501 PGAM1P18669 254 aa14.69□□□□□ -0.06
COL20A1-206ENST00000479501 SERPINB10P48595 397 aa14.69□□□□□ -0.06
COL20A1-206ENST00000479501 PTP4A2Q12974 167 aa14.69□□□□□ -0.06
COL20A1-206ENST00000479501 CXCL17Q6UXB2 119 aa14.69□□□□□ -0.06
COL20A1-206ENST00000479501 ZNF670Q9BS34 389 aa14.69□□□□□ -0.06
COL20A1-206ENST00000479501 AFF4Q9UHB7 1163 aaKnown RBP14.69□□□□□ -0.06
COL20A1-206ENST00000479501 STXBP5LQ9Y2K9 1186 aa14.69□□□□□ -0.06
COL20A1-206ENST00000479501 MYH6P13533 1939 aa14.69□□□□□ -0.06
COL20A1-206ENST00000479501 A0A0A0MRY4 1105 aa14.69□□□□□ -0.06
COL20A1-206ENST00000479501 SLC12A8A0AV02 714 aa14.69□□□□□ -0.06
COL20A1-206ENST00000479501 BANF1O75531 89 aa14.69□□□□□ -0.06
COL20A1-206ENST00000479501 DGKIO75912 1065 aa14.69□□□□□ -0.06
COL20A1-206ENST00000479501 PDE5AO76074 875 aa14.69□□□□□ -0.06
COL20A1-206ENST00000479501 BDNFP23560 247 aa14.69□□□□□ -0.06
COL20A1-206ENST00000479501 ALDH1A3P47895 512 aa14.69□□□□□ -0.06
COL20A1-206ENST00000479501 HIRAP54198 1017 aaPredicted RBP14.69□□□□□ -0.06
COL20A1-206ENST00000479501 CACNA2D1P54289 1103 aa14.69□□□□□ -0.06
COL20A1-206ENST00000479501 POU6F1Q14863 301 aa14.69□□□□□ -0.06
COL20A1-206ENST00000479501 MIEF2Q96C03 454 aa14.69□□□□□ -0.06
COL20A1-206ENST00000479501 SPATA13Q96N96 652 aa14.69□□□□□ -0.06
COL20A1-206ENST00000479501 C2CD2LO14523 706 aa14.69□□□□□ -0.06
COL20A1-206ENST00000479501 LRCH4O75427 683 aa14.69□□□□□ -0.06
COL20A1-206ENST00000479501 ERBB2P04626 1255 aa14.69□□□□□ -0.06
COL20A1-206ENST00000479501 CYBBP04839 570 aa14.69□□□□□ -0.06
COL20A1-206ENST00000479501 ELOVL4Q9GZR5 314 aa14.69□□□□□ -0.06
COL20A1-206ENST00000479501 ACSS3Q9H6R3 686 aa14.69□□□□□ -0.06
COL20A1-206ENST00000479501 RRAGCQ9HB90 399 aa14.69□□□□□ -0.06
COL20A1-206ENST00000479501 SNCAIPQ9Y6H5 919 aa14.69□□□□□ -0.06
COL20A1-206ENST00000479501 F5H5T6 163 aa14.68□□□□□ -0.06
COL20A1-206ENST00000479501 CILPO75339 1184 aa14.68□□□□□ -0.06
COL20A1-206ENST00000479501 KCNA4P22459 653 aa14.68□□□□□ -0.06
COL20A1-206ENST00000479501 MLH1P40692 756 aa14.68□□□□□ -0.06
COL20A1-206ENST00000479501 ITGA9Q13797 1035 aa14.68□□□□□ -0.06
COL20A1-206ENST00000479501 PARP6Q2NL67 630 aa14.68□□□□□ -0.06
COL20A1-206ENST00000479501 PREPLQ4J6C6 727 aaPredicted RBP14.68□□□□□ -0.06
COL20A1-206ENST00000479501 FNIP1Q8TF40 1166 aa14.68□□□□□ -0.06
COL20A1-206ENST00000479501 PIK3R5Q8WYR1 880 aa14.68□□□□□ -0.06
COL20A1-206ENST00000479501 TKTL2Q9H0I9 626 aa14.68□□□□□ -0.06
COL20A1-206ENST00000479501 NT5MQ9NPB1 228 aa14.68□□□□□ -0.06
COL20A1-206ENST00000479501 ZMYM2Q9UBW7 1377 aa14.68□□□□□ -0.06
COL20A1-206ENST00000479501 FANCGO15287 622 aa14.68□□□□□ -0.06
COL20A1-206ENST00000479501 ARHGEF9O43307 516 aa14.68□□□□□ -0.06
COL20A1-206ENST00000479501 SUPT7LO94864 414 aa14.68□□□□□ -0.06
COL20A1-206ENST00000479501 UNGP13051 313 aaPredicted RBP14.68□□□□□ -0.06
COL20A1-206ENST00000479501 HADHAP40939 763 aa14.68□□□□□ -0.06
COL20A1-206ENST00000479501 SCNN1GP51170 649 aa14.68□□□□□ -0.06
COL20A1-206ENST00000479501 CAPRIN1Q14444 709 aaKnown RBP14.68□□□□□ -0.06
COL20A1-206ENST00000479501 SNX30Q5VWJ9 437 aa14.68□□□□□ -0.06
COL20A1-206ENST00000479501 ZNF280DQ6N043 979 aa14.68□□□□□ -0.06
COL20A1-206ENST00000479501 LCLAT1Q6UWP7 414 aa14.68□□□□□ -0.06
COL20A1-206ENST00000479501 IFNEQ86WN2 208 aa14.68□□□□□ -0.06
COL20A1-206ENST00000479501 PCYOX1LQ8NBM8 494 aa14.68□□□□□ -0.06
COL20A1-206ENST00000479501 PRDM16Q9HAZ2 1276 aa14.68□□□□□ -0.06
COL20A1-206ENST00000479501 XPNPEP3Q9NQH7 507 aa14.68□□□□□ -0.06
COL20A1-206ENST00000479501 TRPC5OSA6NMA1 111 aa14.68□□□□□ -0.06
COL20A1-206ENST00000479501 STX7O15400 261 aaKnown RBP14.68□□□□□ -0.06
COL20A1-206ENST00000479501 RHOBTB1O94844 696 aa14.68□□□□□ -0.06
COL20A1-206ENST00000479501 ALADP13716 330 aa14.68□□□□□ -0.06
COL20A1-206ENST00000479501 FLOT2Q14254 428 aa14.68□□□□□ -0.06
COL20A1-206ENST00000479501 SCUBE1Q8IWY4 988 aa14.68□□□□□ -0.06
COL20A1-206ENST00000479501 CINPQ9BW66 212 aaPredicted RBP14.68□□□□□ -0.06
COL20A1-206ENST00000479501 LATS2Q9NRM7 1088 aa14.68□□□□□ -0.06
COL20A1-206ENST00000479501 PCDHGC3Q9UN70 934 aa14.68□□□□□ -0.06
COL20A1-206ENST00000479501 LRCH1Q9Y2L9 728 aa14.68□□□□□ -0.06
COL20A1-206ENST00000479501 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.67□□□□□ -0.06
COL20A1-206ENST00000479501 SUPT3HB4E1H0 165 aa14.67□□□□□ -0.06
COL20A1-206ENST00000479501 MAP2K5Q13163 448 aa14.67□□□□□ -0.06
COL20A1-206ENST00000479501 ZNF177Q13360 481 aaPredicted RBP14.67□□□□□ -0.06
COL20A1-206ENST00000479501 MARC1Q5VT66 337 aa14.67□□□□□ -0.06
COL20A1-206ENST00000479501 ELMSAN1Q6PJG2 1045 aa14.67□□□□□ -0.06
COL20A1-206ENST00000479501 ZC3H3Q8IXZ2 948 aaKnown RBP14.67□□□□□ -0.06
COL20A1-206ENST00000479501 LZTR1Q8N653 840 aa14.67□□□□□ -0.06
COL20A1-206ENST00000479501 FBXL18Q96ME1 805 aa14.67□□□□□ -0.06
COL20A1-206ENST00000479501 VAT1Q99536 393 aa14.67□□□□□ -0.06
COL20A1-206ENST00000479501 GPR63Q9BZJ6 419 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms