RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 TGFB1P01137 390 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 TUBB4AP04350 444 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 CA3P07451 260 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 CTSAP10619 480 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 CYP2F1P24903 491 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 ACADSBP45954 432 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 NAP1L1P55209 391 aaKnown RBP6.97□□□□□ -1.29
USP48-208ENST00000479177 ARPP19P56211 112 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 SNX16P57768 344 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 CREMQ03060 361 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 TAP1Q03518 808 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 KRT17Q04695 432 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 ADCY1Q08828 1119 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 ZNF252P-AS1Q0IIN9 211 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 ADIGQ0VDE8 80 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 SMARCB1Q12824 385 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 RAB41Q5JT25 222 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 FAM102AQ5T9C2 384 aaPredicted RBP6.97□□□□□ -1.29
USP48-208ENST00000479177 KIAA1841Q6NSI8 718 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 VSTM1Q6UX27 236 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 SYT10Q6XYQ8 523 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 SLC26A9Q7LBE3 791 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 SPRED2Q7Z698 418 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 HOMEZQ8IX15 550 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 TTC9BQ8N6N2 239 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 ATAD1Q8NBU5 361 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 JOSD2Q8TAC2 188 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 SPPL2BQ8TCT7 592 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 CLEC4CQ8WTT0 213 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 C2orf15Q8WU43 125 aaKnown RBP6.97□□□□□ -1.29
USP48-208ENST00000479177 MYRFLQ96LU7 910 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 PGLYRP2Q96PD5 576 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 MCEEQ96PE7 176 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 KCNK16Q96T55 309 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 NAPGQ99747 312 aaPredicted RBP6.97□□□□□ -1.29
USP48-208ENST00000479177 CLSTN3Q9BQT9 956 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 CORO1BQ9BR76 489 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 C17orf80Q9BSJ5 609 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 UBXN6Q9BZV1 441 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 GOLPH3Q9H4A6 298 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 CCDC86Q9H6F5 360 aaKnown RBP6.97□□□□□ -1.29
USP48-208ENST00000479177 RXFP1Q9HBX9 757 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 MRPL47Q9HD33 250 aaKnown RBP6.97□□□□□ -1.29
USP48-208ENST00000479177 METTL5Q9NRN9 209 aaKnown RBP6.97□□□□□ -1.29
USP48-208ENST00000479177 PARVAQ9NVD7 372 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 DNAI1Q9UI46 699 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 ANAPC7Q9UJX3 599 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 LZTS1Q9Y250 596 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 YBX2Q9Y2T7 364 aaKnown RBP6.97□□□□□ -1.29
USP48-208ENST00000479177 CDY1Q9Y6F8 540 aa6.97□□□□□ -1.29
USP48-208ENST00000479177 LAMA3Q16787 3333 aa6.96□□□□□ -1.29
USP48-208ENST00000479177 HMX2A2RU54 273 aa6.96□□□□□ -1.3
USP48-208ENST00000479177 TMEM191CA6NGB0 347 aa6.96□□□□□ -1.3
USP48-208ENST00000479177 SIGLEC16A6NMB1 481 aa6.96□□□□□ -1.3
USP48-208ENST00000479177 KIAA1324LA8MWY0 1029 aaPredicted RBP6.96□□□□□ -1.3
USP48-208ENST00000479177 DAB1O75553 588 aa6.96□□□□□ -1.3
USP48-208ENST00000479177 PROSCO94903 275 aa6.96□□□□□ -1.3
USP48-208ENST00000479177 FBXO21O94952 628 aa6.96□□□□□ -1.3
USP48-208ENST00000479177 FTCDO95954 541 aa6.96□□□□□ -1.3
USP48-208ENST00000479177 ATP1A1P05023 1023 aaKnown RBP6.96□□□□□ -1.3
USP48-208ENST00000479177 USP17L7P0C7H9 530 aa6.96□□□□□ -1.3
USP48-208ENST00000479177 HAPLN1P10915 354 aaPredicted RBP6.96□□□□□ -1.3
USP48-208ENST00000479177 LCP1P13796 627 aa6.96□□□□□ -1.3
USP48-208ENST00000479177 MAN1A1P33908 653 aa6.96□□□□□ -1.3
USP48-208ENST00000479177 OR1D2P34982 312 aa6.96□□□□□ -1.3
USP48-208ENST00000479177 GPR15P49685 360 aa6.96□□□□□ -1.3
USP48-208ENST00000479177 TKTL1P51854 596 aa6.96□□□□□ -1.3
USP48-208ENST00000479177 SLC5A3P53794 718 aa6.96□□□□□ -1.3
USP48-208ENST00000479177 RPL7AP62424 266 aaKnown RBP6.96□□□□□ -1.3
USP48-208ENST00000479177 AMPD2Q01433 879 aa6.96□□□□□ -1.3
USP48-208ENST00000479177 SLC6A3Q01959 620 aa6.96□□□□□ -1.3
USP48-208ENST00000479177 OGDHQ02218 1023 aa6.96□□□□□ -1.3
USP48-208ENST00000479177 RAB33AQ14088 237 aa6.96□□□□□ -1.3
USP48-208ENST00000479177 TPGS2Q68CL5 300 aa6.96□□□□□ -1.3
USP48-208ENST00000479177 OR6B2Q6IFH4 312 aa6.96□□□□□ -1.3
USP48-208ENST00000479177 TRNP1Q6NT89 227 aa6.96□□□□□ -1.3
USP48-208ENST00000479177 DCUN1D2Q6PH85 259 aa6.96□□□□□ -1.3
USP48-208ENST00000479177 BHLHA9Q7RTU4 235 aa6.96□□□□□ -1.3
USP48-208ENST00000479177 DAAM2Q86T65 1068 aa6.96□□□□□ -1.3
USP48-208ENST00000479177 CPNE8Q86YQ8 564 aa6.96□□□□□ -1.3
USP48-208ENST00000479177 ZDHHC17Q8IUH5 632 aa6.96□□□□□ -1.3
USP48-208ENST00000479177 SYCE1Q8N0S2 351 aa6.96□□□□□ -1.3
USP48-208ENST00000479177 SIX6OS1Q8N1H7 587 aa6.96□□□□□ -1.3
USP48-208ENST00000479177 SCML4Q8N228 414 aa6.96□□□□□ -1.3
USP48-208ENST00000479177 NIPA2Q8N8Q9 360 aa6.96□□□□□ -1.3
USP48-208ENST00000479177 FEZF2Q8TBJ5 459 aa6.96□□□□□ -1.3
USP48-208ENST00000479177 FNIP1Q8TF40 1166 aa6.96□□□□□ -1.3
USP48-208ENST00000479177 AUTS2Q8WXX7 1259 aa6.96□□□□□ -1.3
USP48-208ENST00000479177 C8orf48Q96LL4 319 aa6.96□□□□□ -1.3
USP48-208ENST00000479177 SAMD11Q96NU1 681 aa6.96□□□□□ -1.3
USP48-208ENST00000479177 TGS1Q96RS0 853 aaKnown RBP6.96□□□□□ -1.3
USP48-208ENST00000479177 C11orf84Q9BUA3 381 aaPredicted RBP6.96□□□□□ -1.3
USP48-208ENST00000479177 SELENOOQ9BVL4 669 aa6.96□□□□□ -1.3
USP48-208ENST00000479177 TLR10Q9BXR5 811 aa6.96□□□□□ -1.3
USP48-208ENST00000479177 ULBP1Q9BZM6 244 aa6.96□□□□□ -1.3
USP48-208ENST00000479177 LRRC4Q9HBW1 653 aa6.96□□□□□ -1.3
USP48-208ENST00000479177 CNGB3Q9NQW8 809 aa6.96□□□□□ -1.3
USP48-208ENST00000479177 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.96□□□□□ -1.3
USP48-208ENST00000479177 MRPL17Q9NRX2 175 aaKnown RBP6.96□□□□□ -1.3
USP48-208ENST00000479177 ASNSD1Q9NWL6 643 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms