RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 NUDCD3Q8IVD9 361 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 SPNS2Q8IVW8 549 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 HACE1Q8IYU2 909 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 NME8Q8N427 588 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 UCMAQ8WVF2 138 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 AZIN2Q96A70 460 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 E2F7Q96AV8 911 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 MOCOSQ96EN8 888 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 P2RY11Q96G91 374 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 TMEM30AQ9NV96 361 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 NMRK1Q9NWW6 199 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 SBF1O95248 1867 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 COL1A2P08123 1366 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 RNF103O00237 685 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 NRP1O14786 923 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 CAPN9O14815 690 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 SMNDC1O75940 238 aaKnown RBP eCLIP11.14□□□□□ -0.63
VPS52-217ENST00000478934 GSRP00390 522 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 ERVK-10P10266 1014 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 MAGEA6P43360 314 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 CACNA2D1P54289 1103 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 BCAT1P54687 386 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 RPL10AP62906 217 aaKnown RBP11.14□□□□□ -0.63
VPS52-217ENST00000478934 THOC5Q13769 683 aaKnown RBP11.14□□□□□ -0.63
VPS52-217ENST00000478934 KYAT1Q16773 422 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 UBXN11Q5T124 520 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 WSCD1Q658N2 575 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 TFB1MQ8WVM0 346 aaKnown RBP11.14□□□□□ -0.63
VPS52-217ENST00000478934 ARNTL2Q8WYA1 636 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 FAM161BQ96MY7 647 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 KCNK16Q96T55 309 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 PTPN18Q99952 460 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 RHOBTB2Q9BYZ6 727 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 YIPF3Q9GZM5 350 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 PLEKHA5Q9HAU0 1116 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 PIGVQ9NUD9 493 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 FLRT1Q9NZU1 646 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 LNPEPQ9UIQ6 1025 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 FZD10Q9ULW2 581 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 PCDHA11Q9Y5I1 949 aa11.14□□□□□ -0.63
VPS52-217ENST00000478934 CCDC78A2IDD5 438 aa11.13□□□□□ -0.63
VPS52-217ENST00000478934 DCAF8L1A6NGE4 600 aa11.13□□□□□ -0.63
VPS52-217ENST00000478934 B2RBV5 119 aa11.13□□□□□ -0.63
VPS52-217ENST00000478934 M0QYT0 321 aa11.13□□□□□ -0.63
VPS52-217ENST00000478934 TRAFD1O14545 582 aaPredicted RBP11.13□□□□□ -0.63
VPS52-217ENST00000478934 TBX10O75333 385 aa11.13□□□□□ -0.63
VPS52-217ENST00000478934 SPAG6O75602 509 aa11.13□□□□□ -0.63
VPS52-217ENST00000478934 DGKIO75912 1065 aa11.13□□□□□ -0.63
VPS52-217ENST00000478934 ALDOAP04075 364 aaKnown RBP11.13□□□□□ -0.63
VPS52-217ENST00000478934 MAP3K7CLP57077 242 aa11.13□□□□□ -0.63
VPS52-217ENST00000478934 CCNA1P78396 465 aa11.13□□□□□ -0.63
VPS52-217ENST00000478934 TEX44Q53QW1 395 aa11.13□□□□□ -0.63
VPS52-217ENST00000478934 NT5DC4Q86YG4 428 aa11.13□□□□□ -0.63
VPS52-217ENST00000478934 CRYBG2Q8N1P7 616 aa11.13□□□□□ -0.63
VPS52-217ENST00000478934 LRRC52Q8N7C0 313 aa11.13□□□□□ -0.63
VPS52-217ENST00000478934 MCUQ8NE86 351 aa11.13□□□□□ -0.63
VPS52-217ENST00000478934 APPL2Q8NEU8 664 aa11.13□□□□□ -0.63
VPS52-217ENST00000478934 RILPQ96NA2 401 aa11.13□□□□□ -0.63
VPS52-217ENST00000478934 OLFM3Q96PB7 478 aa11.13□□□□□ -0.63
VPS52-217ENST00000478934 PRDM12Q9H4Q4 367 aa11.13□□□□□ -0.63
VPS52-217ENST00000478934 SYBUQ9NX95 663 aa11.13□□□□□ -0.63
VPS52-217ENST00000478934 EMCNQ9ULC0 261 aa11.13□□□□□ -0.63
VPS52-217ENST00000478934 CLEC11AQ9Y240 323 aa11.13□□□□□ -0.63
VPS52-217ENST00000478934 TRDMT1O14717 391 aaKnown RBP11.13□□□□□ -0.63
VPS52-217ENST00000478934 TPP1O14773 563 aa11.13□□□□□ -0.63
VPS52-217ENST00000478934 SETSIPP0DME0 302 aa11.13□□□□□ -0.63
VPS52-217ENST00000478934 ARRB2P32121 409 aa11.13□□□□□ -0.63
VPS52-217ENST00000478934 MATKP42679 507 aa11.13□□□□□ -0.63
VPS52-217ENST00000478934 CCNHP51946 323 aaPredicted RBP11.13□□□□□ -0.63
VPS52-217ENST00000478934 LILRA4P59901 499 aa11.13□□□□□ -0.63
VPS52-217ENST00000478934 SEMA5AQ13591 1074 aa11.13□□□□□ -0.63
VPS52-217ENST00000478934 SNX17Q15036 470 aa11.13□□□□□ -0.63
VPS52-217ENST00000478934 OLFML2BQ68BL8 750 aa11.13□□□□□ -0.63
VPS52-217ENST00000478934 CAPRIN2Q6IMN6 1127 aaKnown RBP11.13□□□□□ -0.63
VPS52-217ENST00000478934 GPRIN1Q7Z2K8 1008 aa11.13□□□□□ -0.63
VPS52-217ENST00000478934 UNC93AQ86WB7 457 aa11.13□□□□□ -0.63
VPS52-217ENST00000478934 STKLD1Q8NE28 680 aa11.13□□□□□ -0.63
VPS52-217ENST00000478934 ZNF778Q96MU6 729 aa11.13□□□□□ -0.63
VPS52-217ENST00000478934 APOL2Q9BQE5 337 aa11.13□□□□□ -0.63
VPS52-217ENST00000478934 SAR1AQ9NR31 198 aa11.13□□□□□ -0.63
VPS52-217ENST00000478934 MOCS1Q9NZB8 636 aa11.13□□□□□ -0.63
VPS52-217ENST00000478934 ZNF180Q9UJW8 692 aa11.13□□□□□ -0.63
VPS52-217ENST00000478934 UBQLN1Q9UMX0 589 aaKnown RBP11.13□□□□□ -0.63
VPS52-217ENST00000478934 MTO1Q9Y2Z2 717 aaKnown RBP11.13□□□□□ -0.63
VPS52-217ENST00000478934 PLXNA1Q9UIW2 1896 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 A0A0A0MRY4 1105 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 DPPA5A6NC42 116 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 ENO4A6NNW6 628 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 KRT38O76015 456 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 SORBS2O94875 1100 aaKnown RBP11.12□□□□□ -0.63
VPS52-217ENST00000478934 RARBP10826 455 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 OCRLQ01968 901 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 WASHC5Q12768 1159 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 CCL14Q16627 93 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 SNX30Q5VWJ9 437 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 ZNF567Q8N184 647 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 B3GALNT2Q8NCR0 500 aa11.12□□□□□ -0.63
VPS52-217ENST00000478934 SMG8Q8ND04 991 aaKnown RBP11.12□□□□□ -0.63
VPS52-217ENST00000478934 RBM15BQ8NDT2 890 aaKnown RBP11.12□□□□□ -0.63
VPS52-217ENST00000478934 ZNF398Q8TD17 642 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms