RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 PSMG3-AS1Q96PY0 264 aa10.2□□□□□ -0.78
SMARCB1-206ENST00000477836 KCNK16Q96T55 309 aa10.2□□□□□ -0.78
SMARCB1-206ENST00000477836 REEP2Q9BRK0 252 aa10.2□□□□□ -0.78
SMARCB1-206ENST00000477836 FAM213AQ9BRX8 229 aa10.2□□□□□ -0.78
SMARCB1-206ENST00000477836 KLF16Q9BXK1 252 aaPredicted RBP10.2□□□□□ -0.78
SMARCB1-206ENST00000477836 IKZF4Q9H2S9 585 aa10.2□□□□□ -0.78
SMARCB1-206ENST00000477836 CUEDC2Q9H467 287 aa10.2□□□□□ -0.78
SMARCB1-206ENST00000477836 ZHX3Q9H4I2 956 aa10.2□□□□□ -0.78
SMARCB1-206ENST00000477836 EBF2Q9HAK2 575 aa10.2□□□□□ -0.78
SMARCB1-206ENST00000477836 MAGEF1Q9HAY2 307 aa10.2□□□□□ -0.78
SMARCB1-206ENST00000477836 SIX4Q9UIU6 781 aa10.2□□□□□ -0.78
SMARCB1-206ENST00000477836 ODF2LQ9ULJ1 636 aa10.2□□□□□ -0.78
SMARCB1-206ENST00000477836 SATB2Q9UPW6 733 aa10.2□□□□□ -0.78
SMARCB1-206ENST00000477836 R3HCC1Q9Y3T6 440 aaKnown RBP10.2□□□□□ -0.78
SMARCB1-206ENST00000477836 STYXL1Q9Y6J8 313 aa10.2□□□□□ -0.78
SMARCB1-206ENST00000477836 SPENQ96T58 3664 aaKnown RBP10.19□□□□□ -0.78
SMARCB1-206ENST00000477836 LRBAP50851 2863 aa10.19□□□□□ -0.78
SMARCB1-206ENST00000477836 BLACEA4D250 179 aa10.19□□□□□ -0.78
SMARCB1-206ENST00000477836 WNT9AO14904 365 aa10.19□□□□□ -0.78
SMARCB1-206ENST00000477836 SIGLEC6O43699 453 aa10.19□□□□□ -0.78
SMARCB1-206ENST00000477836 ACTN4O43707 911 aaKnown RBP10.19□□□□□ -0.78
SMARCB1-206ENST00000477836 SLFN14P0C7P3 912 aa10.19□□□□□ -0.78
SMARCB1-206ENST00000477836 ZDHHC11BP0C7U3 371 aa10.19□□□□□ -0.78
SMARCB1-206ENST00000477836 WARSP23381 471 aaKnown RBP10.19□□□□□ -0.78
SMARCB1-206ENST00000477836 GNL1P36915 607 aaPredicted RBP10.19□□□□□ -0.78
SMARCB1-206ENST00000477836 PGFP49763 221 aa10.19□□□□□ -0.78
SMARCB1-206ENST00000477836 SLC5A3P53794 718 aa10.19□□□□□ -0.78
SMARCB1-206ENST00000477836 NXPH1P58417 271 aa10.19□□□□□ -0.78
SMARCB1-206ENST00000477836 RPS14P62263 151 aaKnown RBP10.19□□□□□ -0.78
SMARCB1-206ENST00000477836 SKOR1P84550 965 aa10.19□□□□□ -0.78
SMARCB1-206ENST00000477836 E2F4Q16254 413 aa10.19□□□□□ -0.78
SMARCB1-206ENST00000477836 TTC31Q49AM3 519 aaPredicted RBP10.19□□□□□ -0.78
SMARCB1-206ENST00000477836 TMEM119Q4V9L6 283 aa10.19□□□□□ -0.78
SMARCB1-206ENST00000477836 FYB2Q5VWT5 728 aa10.19□□□□□ -0.78
SMARCB1-206ENST00000477836 KANSL1Q7Z3B3 1105 aa10.19□□□□□ -0.78
SMARCB1-206ENST00000477836 LIMS2Q7Z4I7 341 aa10.19□□□□□ -0.78
SMARCB1-206ENST00000477836 ZNF366Q8N895 744 aa10.19□□□□□ -0.78
SMARCB1-206ENST00000477836 ZSWIM2Q8NEG5 633 aa10.19□□□□□ -0.78
SMARCB1-206ENST00000477836 HPDLQ96IR7 371 aa10.19□□□□□ -0.78
SMARCB1-206ENST00000477836 PIWIL1Q96J94 861 aaKnown RBP10.19□□□□□ -0.78
SMARCB1-206ENST00000477836 CCNL2Q96S94 520 aaPredicted RBP10.19□□□□□ -0.78
SMARCB1-206ENST00000477836 MTMR12Q9C0I1 747 aa10.19□□□□□ -0.78
SMARCB1-206ENST00000477836 SNX25Q9H3E2 840 aa10.19□□□□□ -0.78
SMARCB1-206ENST00000477836 DPEP3Q9H4B8 488 aa10.19□□□□□ -0.78
SMARCB1-206ENST00000477836 PARVGQ9HBI0 331 aa10.19□□□□□ -0.78
SMARCB1-206ENST00000477836 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.19□□□□□ -0.78
SMARCB1-206ENST00000477836 STK17AQ9UEE5 414 aa10.19□□□□□ -0.78
SMARCB1-206ENST00000477836 SERTAD1Q9UHV2 236 aa10.19□□□□□ -0.78
SMARCB1-206ENST00000477836 NME7Q9Y5B8 376 aa10.19□□□□□ -0.78
SMARCB1-206ENST00000477836 DOPEY1Q5JWR5 2465 aa10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 A0A1W2PR77 199 aa10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 CLEC18AA5D8T8 446 aa10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 TLR4O00206 839 aa10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 OPA1O60313 960 aa10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 SDC3O75056 442 aa10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 PENKP01210 267 aaPredicted RBP10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 TMEM191BP0C7N4 346 aa10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 SFTPCP11686 197 aa10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 PTPN1P18031 435 aaKnown RBP10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 RXRGP48443 463 aa10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 ZNF445P59923 1031 aa10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 ASIC1P78348 528 aa10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 ZBTB16Q05516 673 aa10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 CLN3Q13286 438 aa10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 MAPK8IP2Q13387 824 aaPredicted RBP10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 DHX8Q14562 1220 aaKnown RBP10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 EIF4HQ15056 248 aaKnown RBP10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 POSTNQ15063 836 aa10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 FNDC3BQ53EP0 1204 aaKnown RBP10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 HYIQ5T013 277 aa10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 TMEM215Q68D42 235 aa10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 CLEC18BQ6UXF7 455 aa10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 RBM43Q6ZSC3 357 aaKnown RBP10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 USP53Q70EK8 1073 aa10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 BRSK2Q8IWQ3 736 aa10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 OXR1Q8N573 874 aa10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 RBBP8NLQ8NC74 664 aaPredicted RBP10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 CLEC18CQ8NCF0 446 aa10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 OR6B3Q8NGW1 331 aa10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 GANCQ8TET4 914 aa10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 SAAL1Q96ER3 474 aa10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 SLC46A1Q96NT5 459 aa10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 MRPL45Q9BRJ2 306 aaKnown RBP10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 B3GNT5Q9BYG0 378 aa10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 PANK2Q9BZ23 570 aa10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 OSBPL2Q9H1P3 480 aa10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 LRRC4CQ9HCJ2 640 aa10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 RBAKQ9NYW8 714 aaPredicted RBP10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 NCKAP1Q9Y2A7 1128 aa10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 ARID1BQ8NFD5 2236 aaPredicted RBP10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 ITPR2Q14571 2701 aa10.18□□□□□ -0.78
SMARCB1-206ENST00000477836 TLN1Q9Y490 2541 aaKnown RBP10.17□□□□□ -0.78
SMARCB1-206ENST00000477836 CRYBG3Q68DQ2 2970 aa10.17□□□□□ -0.78
SMARCB1-206ENST00000477836 ABCA12Q86UK0 2595 aa10.17□□□□□ -0.78
SMARCB1-206ENST00000477836 TRIM38O00635 465 aa10.17□□□□□ -0.78
SMARCB1-206ENST00000477836 CYP26A1O43174 497 aa10.17□□□□□ -0.78
SMARCB1-206ENST00000477836 EFSO43281 561 aa10.17□□□□□ -0.78
SMARCB1-206ENST00000477836 ABCD1P33897 745 aa10.17□□□□□ -0.78
SMARCB1-206ENST00000477836 ATP5C1P36542 298 aaKnown RBP10.17□□□□□ -0.78
SMARCB1-206ENST00000477836 AFMP43652 599 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms