RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 CERS1P27544 350 aa5.21□□□□□ -1.58
SMNDC1-205ENST00000477763 SERPINA4P29622 427 aa5.21□□□□□ -1.58
SMNDC1-205ENST00000477763 MCM2P49736 904 aa5.21□□□□□ -1.58
SMNDC1-205ENST00000477763 JAK3P52333 1124 aa5.21□□□□□ -1.58
SMNDC1-205ENST00000477763 ACTR2P61160 394 aa5.21□□□□□ -1.58
SMNDC1-205ENST00000477763 RBM6P78332 1123 aaKnown RBP5.21□□□□□ -1.58
SMNDC1-205ENST00000477763 GPC5P78333 572 aa5.21□□□□□ -1.58
SMNDC1-205ENST00000477763 CFHR3Q02985 330 aa5.21□□□□□ -1.58
SMNDC1-205ENST00000477763 AAK1Q2M2I8 961 aa5.21□□□□□ -1.58
SMNDC1-205ENST00000477763 CERKLQ49MI3 558 aaPredicted RBP5.21□□□□□ -1.58
SMNDC1-205ENST00000477763 ALFQ53S48 1182 aa5.21□□□□□ -1.58
SMNDC1-205ENST00000477763 ANKRD40Q6AI12 368 aa5.21□□□□□ -1.58
SMNDC1-205ENST00000477763 CHSY1Q86X52 802 aa5.21□□□□□ -1.58
SMNDC1-205ENST00000477763 C2CD5Q86YS7 1000 aa5.21□□□□□ -1.58
SMNDC1-205ENST00000477763 SUGP1Q8IWZ8 645 aaKnown RBP5.21□□□□□ -1.58
SMNDC1-205ENST00000477763 SRRM1Q8IYB3 904 aaKnown RBP5.21□□□□□ -1.58
SMNDC1-205ENST00000477763 MCRS1Q96EZ8 462 aa5.21□□□□□ -1.58
SMNDC1-205ENST00000477763 EDC3Q96F86 508 aaKnown RBP5.21□□□□□ -1.58
SMNDC1-205ENST00000477763 PRR11Q96HE9 360 aaPredicted RBP5.21□□□□□ -1.58
SMNDC1-205ENST00000477763 HS6ST2Q96MM7 605 aa5.21□□□□□ -1.58
SMNDC1-205ENST00000477763 ASB2Q96Q27 587 aa5.21□□□□□ -1.58
SMNDC1-205ENST00000477763 PYM1Q9BRP8 204 aaKnown RBP5.21□□□□□ -1.58
SMNDC1-205ENST00000477763 KCNK9Q9NPC2 374 aa5.21□□□□□ -1.58
SMNDC1-205ENST00000477763 VPS4AQ9UN37 437 aa5.21□□□□□ -1.58
SMNDC1-205ENST00000477763 PCDHB2Q9Y5E7 798 aa5.21□□□□□ -1.58
SMNDC1-205ENST00000477763 TBC1D3DA0A087WVF3 549 aa5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 TBC1D3IA0A087WXS9 549 aa5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 TBC1D3EA0A087X179 549 aa5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 TBC1D3KA0A087X1G2 549 aa5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 LOC105369274A0A096LPK9 316 aa5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 LOC102723532A0A0G2JNH3 316 aa5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 TBC1D3BA6NDS4 549 aa5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 TBC1D3FA6NER0 549 aaPredicted RBP5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 TTC34A8MYJ7 566 aa5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 TBC1D3LB9A6J9 549 aa5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 EIF3FO00303 357 aaPredicted RBP5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 NKX2-8O15522 239 aa5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 KRT38O76015 456 aa5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 SLC3A2P08195 630 aaKnown RBP5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 TBC1D3HP0C7X1 549 aa5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 DUSP1P28562 367 aa5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 PRKAA2P54646 552 aa5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 FOXF2Q12947 444 aa5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 EFR3AQ14156 821 aa5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 FAM187BQ17R55 369 aa5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 TMEM119Q4V9L6 283 aa5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 TBC1D3GQ6DHY5 549 aa5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 TBC1D3CQ6IPX1 549 aa5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 WDR93Q6P2C0 686 aa5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 SERPINA13PQ6UXR4 307 aa5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 ZNF782Q6ZMW2 699 aaPredicted RBP5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 TBC1D3Q8IZP1 549 aaPredicted RBP5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 OR4N4Q8N0Y3 316 aa5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 TMEM57Q8N5G2 664 aa5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 CSGALNACT1Q8TDX6 532 aa5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 GLMPQ8WWB7 406 aa5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 NPIPB3Q92617 1050 aa5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 VOPP1Q96AW1 172 aa5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 UBXN10Q96LJ8 280 aa5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 CCDC17Q96LX7 622 aa5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 TBATAQ96M53 351 aa5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 MECRQ9BV79 373 aa5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 ADGRE3Q9BY15 652 aa5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 TWSG1Q9GZX9 223 aa5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 RRN3Q9NYV6 651 aa5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 FZD4Q9ULV1 537 aa5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 LRRFIP2Q9Y608 721 aaKnown RBP5.2□□□□□ -1.58
SMNDC1-205ENST00000477763 CGB1A6NKQ9 187 aa5.19□□□□□ -1.58
SMNDC1-205ENST00000477763 SLC38A8A6NNN8 435 aa5.19□□□□□ -1.58
SMNDC1-205ENST00000477763 B9A039 149 aa5.19□□□□□ -1.58
SMNDC1-205ENST00000477763 M0QZQ0 153 aa5.19□□□□□ -1.58
SMNDC1-205ENST00000477763 SEPT4O43236 478 aa5.19□□□□□ -1.58
SMNDC1-205ENST00000477763 PRAMEF2O60811 474 aa5.19□□□□□ -1.58
SMNDC1-205ENST00000477763 TFRCP02786 760 aaKnown RBP5.19□□□□□ -1.58
SMNDC1-205ENST00000477763 TK1P04183 234 aa5.19□□□□□ -1.58
SMNDC1-205ENST00000477763 PAX3P23760 479 aa5.19□□□□□ -1.58
SMNDC1-205ENST00000477763 GALNSP34059 522 aa5.19□□□□□ -1.58
SMNDC1-205ENST00000477763 GRK5P34947 590 aa5.19□□□□□ -1.58
SMNDC1-205ENST00000477763 RBM5P52756 815 aaKnown RBP eCLIP5.19□□□□□ -1.58
SMNDC1-205ENST00000477763 RNASELQ05823 741 aaKnown RBP5.19□□□□□ -1.58
SMNDC1-205ENST00000477763 POU5F1BQ06416 359 aa5.19□□□□□ -1.58
SMNDC1-205ENST00000477763 LARS2Q15031 903 aaKnown RBP5.19□□□□□ -1.58
SMNDC1-205ENST00000477763 DGAT2L7PQ6IED9 249 aa5.19□□□□□ -1.58
SMNDC1-205ENST00000477763 PAF1Q8N7H5 531 aa5.19□□□□□ -1.58
SMNDC1-205ENST00000477763 PNLDC1Q8NA58 520 aaKnown RBP5.19□□□□□ -1.58
SMNDC1-205ENST00000477763 SRFBP1Q8NEF9 429 aaKnown RBP5.19□□□□□ -1.58
SMNDC1-205ENST00000477763 USP13Q92995 863 aaPredicted RBP5.19□□□□□ -1.58
SMNDC1-205ENST00000477763 NAP1L4Q99733 375 aaKnown RBP5.19□□□□□ -1.58
SMNDC1-205ENST00000477763 RIC8AQ9NPQ8 531 aa5.19□□□□□ -1.58
SMNDC1-205ENST00000477763 G6PC2Q9NQR9 355 aa5.19□□□□□ -1.58
SMNDC1-205ENST00000477763 KCND3Q9UK17 655 aa5.19□□□□□ -1.58
SMNDC1-205ENST00000477763 FEM1BQ9UK73 627 aa5.19□□□□□ -1.58
SMNDC1-205ENST00000477763 SLC12A4Q9UP95 1085 aa5.19□□□□□ -1.58
SMNDC1-205ENST00000477763 MBD3L5A6NJ08 208 aaPredicted RBP5.18□□□□□ -1.58
SMNDC1-205ENST00000477763 M0QYT0 321 aa5.18□□□□□ -1.58
SMNDC1-205ENST00000477763 CLIC1O00299 241 aa5.18□□□□□ -1.58
SMNDC1-205ENST00000477763 GCATO75600 419 aa5.18□□□□□ -1.58
SMNDC1-205ENST00000477763 TUBB4AP04350 444 aa5.18□□□□□ -1.58
SMNDC1-205ENST00000477763 CELA2AP08217 269 aa5.18□□□□□ -1.58
SMNDC1-205ENST00000477763 CYP3A4P08684 503 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms