RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	SSBP3	Q9BWW4	388 aa	Predicted RBP	4.9	□□□□□ -1.63
PTCD3-212	ENST00000477520	SLC12A9	Q9BXP2	914 aa		4.9	□□□□□ -1.63
PTCD3-212	ENST00000477520	TDRD1	Q9BXT4	1180 aa	Known RBP	4.9	□□□□□ -1.63
PTCD3-212	ENST00000477520	RNF26	Q9BY78	433 aa	Predicted RBP	4.9	□□□□□ -1.63
PTCD3-212	ENST00000477520	NUF2	Q9BZD4	464 aa		4.9	□□□□□ -1.63
PTCD3-212	ENST00000477520	OSBPL8	Q9BZF1	889 aa		4.9	□□□□□ -1.63
PTCD3-212	ENST00000477520	KIAA1683	Q9H0B3	1180 aa		4.9	□□□□□ -1.63
PTCD3-212	ENST00000477520	KLC2	Q9H0B6	622 aa		4.9	□□□□□ -1.63
PTCD3-212	ENST00000477520	NT5C3A	Q9H0P0	336 aa		4.9	□□□□□ -1.63
PTCD3-212	ENST00000477520	MYLK2	Q9H1R3	596 aa		4.9	□□□□□ -1.63
PTCD3-212	ENST00000477520	TPK1	Q9H3S4	243 aa		4.9	□□□□□ -1.63
PTCD3-212	ENST00000477520	AZI2	Q9H6S1	392 aa		4.9	□□□□□ -1.63
PTCD3-212	ENST00000477520	GREM2	Q9H772	168 aa		4.9	□□□□□ -1.63
PTCD3-212	ENST00000477520	RIC8A	Q9NPQ8	531 aa		4.9	□□□□□ -1.63
PTCD3-212	ENST00000477520	DIABLO	Q9NR28	239 aa		4.9	□□□□□ -1.63
PTCD3-212	ENST00000477520	CNNM1	Q9NRU3	951 aa		4.9	□□□□□ -1.63
PTCD3-212	ENST00000477520	INIP	Q9NRY2	104 aa		4.9	□□□□□ -1.63
PTCD3-212	ENST00000477520	ZDHHC18	Q9NUE0	388 aa		4.9	□□□□□ -1.63
PTCD3-212	ENST00000477520	TCP11L1	Q9NUJ3	509 aa		4.9	□□□□□ -1.63
PTCD3-212	ENST00000477520	ARMC1	Q9NVT9	282 aa		4.9	□□□□□ -1.63
PTCD3-212	ENST00000477520	FKBP14	Q9NWM8	211 aa		4.9	□□□□□ -1.63
PTCD3-212	ENST00000477520	SEPT10	Q9P0V9	454 aa		4.9	□□□□□ -1.63
PTCD3-212	ENST00000477520	IGSF9	Q9P2J2	1179 aa		4.9	□□□□□ -1.63
PTCD3-212	ENST00000477520	RSL24D1	Q9UHA3	163 aa	Known RBP	4.9	□□□□□ -1.63
PTCD3-212	ENST00000477520	PCYOX1	Q9UHG3	505 aa		4.9	□□□□□ -1.63
PTCD3-212	ENST00000477520	HAO1	Q9UJM8	370 aa		4.9	□□□□□ -1.63
PTCD3-212	ENST00000477520	GTF3C4	Q9UKN8	822 aa		4.9	□□□□□ -1.63
PTCD3-212	ENST00000477520	STX8	Q9UNK0	236 aa		4.9	□□□□□ -1.63
PTCD3-212	ENST00000477520	RABL2B	Q9UNT1	228 aa		4.9	□□□□□ -1.63
PTCD3-212	ENST00000477520	EXOC7	Q9UPT5	735 aa		4.9	□□□□□ -1.63
PTCD3-212	ENST00000477520	APOBEC2	Q9Y235	224 aa	Known RBP	4.9	□□□□□ -1.63
PTCD3-212	ENST00000477520	SIK3	Q9Y2K2	1263 aa		4.9	□□□□□ -1.63
PTCD3-212	ENST00000477520	IFT52	Q9Y366	437 aa		4.9	□□□□□ -1.63
PTCD3-212	ENST00000477520	TRIM17	Q9Y577	477 aa		4.9	□□□□□ -1.63
PTCD3-212	ENST00000477520	SCIN	Q9Y6U3	715 aa		4.9	□□□□□ -1.63
PTCD3-212	ENST00000477520	FPGT-TNNI3K	V9GXZ4	949 aa		4.9	□□□□□ -1.63
PTCD3-212	ENST00000477520	KIF13B	Q9NQT8	1826 aa		4.9	□□□□□ -1.63
PTCD3-212	ENST00000477520	ANKRD31	Q8N7Z5	1873 aa		4.9	□□□□□ -1.63
PTCD3-212	ENST00000477520		A0A0G2JLW4	131 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	IQANK1	A0A1B0GTG1	560 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	TLDC2	A0PJX2	215 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	FUOM	A2VDF0	154 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	FAM47DP	A6NHR8	397 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	MINDY4B	A8MYZ0	360 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	RASA4B	C9J798	803 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	GOLGA8M	H3BSY2	632 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	KPNA4	O00629	521 aa	Predicted RBP	4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	CASQ2	O14958	399 aa	Predicted RBP	4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	VILL	O15195	856 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	RASA4	O43374	803 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	EDF1	O60869	148 aa	Known RBP	4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	ENTPD5	O75356	428 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	CIAO1	O76071	339 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	HAUS5	O94927	633 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	PLAT	P00750	562 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	CYP1A1	P04798	512 aa	Predicted RBP	4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	ABHD2	P08910	425 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	GSTM1	P09488	218 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	OCM2	P0CE71	109 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	OCM	P0CE72	109 aa	Predicted RBP	4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	GSTT2	P0CG29	244 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	GSTT2B	P0CG30	244 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	T-ENOL	P0DO92	83 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	BRAF	P15056	766 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	DPEP1	P16444	411 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	GM2A	P17900	193 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	VCL	P18206	1134 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	TAC1	P20366	129 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	CDH3	P22223	829 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	EPHB2	P29323	1055 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	TKT	P29401	623 aa	Known RBP	4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	COPB2	P35606	906 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	IL15	P40933	162 aa	Predicted RBP	4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	GDF5	P43026	501 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	TOB1	P50616	345 aa	Predicted RBP	4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	ACTR3	P61158	418 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	ESRRG	P62508	458 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	BASP1	P80723	227 aa	Known RBP	4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	CYP4A11	Q02928	519 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	KLRC3	Q07444	240 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	KCNA1	Q09470	495 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	HSPA14	Q0VDF9	509 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	STK4	Q13043	487 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	CALCOCO2	Q13137	446 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	ORC2	Q13416	577 aa	Predicted RBP	4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	CDSN	Q15517	529 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	ALX1	Q15699	326 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	NTRK3	Q16288	839 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	PDK4	Q16654	411 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	PTPN21	Q16825	1174 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	RGS21	Q2M5E4	152 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	MMEL1	Q495T6	779 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	DALRD3	Q5D0E6	543 aa	Known RBP	4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	ACSBG2	Q5FVE4	666 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	CYP4A22	Q5TCH4	519 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	SLX4IP	Q5VYV7	408 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	ZNF449	Q6P9G9	518 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	TUBA3E	Q6PEY2	450 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	KLHDC10	Q6PID8	442 aa		4.89	□□□□□ -1.63
PTCD3-212	ENST00000477520	IZUMO2	Q6UXV1	221 aa		4.89	□□□□□ -1.63

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