RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 PIWIL1Q96J94 861 aaKnown RBP11.32□□□□□ -0.6
COL27A1-204ENST00000477421 MAGEB5Q9BZ81 275 aa11.32□□□□□ -0.6
COL27A1-204ENST00000477421 POPDC2Q9HBU9 364 aa11.32□□□□□ -0.6
COL27A1-204ENST00000477421 NRCAMQ92823 1304 aa11.32□□□□□ -0.6
COL27A1-204ENST00000477421 ADAMTS7Q9UKP4 1686 aa11.32□□□□□ -0.6
COL27A1-204ENST00000477421 E5RI56 91 aa11.32□□□□□ -0.6
COL27A1-204ENST00000477421 EDF1O60869 148 aaKnown RBP11.32□□□□□ -0.6
COL27A1-204ENST00000477421 C22orf31O95567 290 aa11.32□□□□□ -0.6
COL27A1-204ENST00000477421 GPD2P43304 727 aa11.32□□□□□ -0.6
COL27A1-204ENST00000477421 PLIN5Q00G26 463 aa11.32□□□□□ -0.6
COL27A1-204ENST00000477421 KLC1Q07866 573 aa11.32□□□□□ -0.6
COL27A1-204ENST00000477421 TWF1Q12792 350 aa11.32□□□□□ -0.6
COL27A1-204ENST00000477421 UGP2Q16851 508 aa11.32□□□□□ -0.6
COL27A1-204ENST00000477421 TMEM259Q4ZIN3 620 aa11.32□□□□□ -0.6
COL27A1-204ENST00000477421 TMEM154Q6P9G4 183 aa11.32□□□□□ -0.6
COL27A1-204ENST00000477421 TRMT10BQ6PF06 316 aaKnown RBP11.32□□□□□ -0.6
COL27A1-204ENST00000477421 B3GNT9Q6UX72 402 aa11.32□□□□□ -0.6
COL27A1-204ENST00000477421 ALYREFQ86V81 257 aaKnown RBP11.32□□□□□ -0.6
COL27A1-204ENST00000477421 LRRC43Q8N309 656 aa11.32□□□□□ -0.6
COL27A1-204ENST00000477421 ADAM2Q99965 735 aa11.32□□□□□ -0.6
COL27A1-204ENST00000477421 TRIM4Q9C037 500 aa11.32□□□□□ -0.6
COL27A1-204ENST00000477421 ILKAPQ9H0C8 392 aaPredicted RBP11.32□□□□□ -0.6
COL27A1-204ENST00000477421 PTPRHQ9HD43 1115 aa11.32□□□□□ -0.6
COL27A1-204ENST00000477421 N4BP2Q86UW6 1770 aaPredicted RBP11.32□□□□□ -0.6
COL27A1-204ENST00000477421 A0A0A0MRY4 1105 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 TPST1O60507 370 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 ABHD2P08910 425 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 KCNA3P22001 575 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 BRCC3P46736 316 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 DNAL1Q4LDG9 190 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 UNC5AQ6ZN44 842 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 PDZD8Q8NEN9 1154 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 GPR152Q8TDT2 470 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 P2RY11Q96G91 374 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 GLT1D1Q96MS3 346 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 SPATA13Q96N96 652 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 TSC22D3Q99576 134 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 RNF39Q9H2S5 420 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 CATSPERBQ9H7T0 1116 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 AURKCQ9UQB9 309 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 CDY2AQ9Y6F7 541 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 CDY1Q9Y6F8 540 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 AHDC1Q5TGY3 1603 aaPredicted RBP11.31□□□□□ -0.6
COL27A1-204ENST00000477421 DNAJC8O75937 253 aaPredicted RBP11.31□□□□□ -0.6
COL27A1-204ENST00000477421 F9P00740 461 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 NOS2P35228 1153 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 GP5P40197 560 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 SLC1A6P48664 564 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 LHX1P48742 406 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 POU5F1Q01860 360 aaKnown RBP11.31□□□□□ -0.6
COL27A1-204ENST00000477421 KPNB1Q14974 876 aaKnown RBP11.31□□□□□ -0.6
COL27A1-204ENST00000477421 TCHHL1Q5QJ38 904 aaPredicted RBP11.31□□□□□ -0.6
COL27A1-204ENST00000477421 C9orf57Q5W0N0 161 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 LRRC8EQ6NSJ5 796 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 C4orf22Q6V702 233 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 CCDC185Q8N715 623 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 ICA1LQ8NDH6 482 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 PCDH19Q8TAB3 1148 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 CSPG4P5Q96PW8 444 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 NAT9Q9BTE0 207 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 BEGAINQ9BUH8 593 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 ZCWPW1Q9H0M4 648 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 SDCBP2Q9H190 292 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 FAM96AQ9H5X1 160 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 TRPC7Q9HCX4 862 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 PRDM5Q9NQX1 630 aaPredicted RBP11.31□□□□□ -0.6
COL27A1-204ENST00000477421 DONSONQ9NYP3 566 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 DCDC2Q9UHG0 476 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 SLC4A7Q9Y6M7 1214 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 TUBGCP6Q96RT7 1819 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 ZC3H4Q9UPT8 1303 aaKnown RBP11.31□□□□□ -0.6
COL27A1-204ENST00000477421 GPR182O15218 404 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 PMM2O15305 246 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 CHADO15335 359 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 UGT1A9O60656 530 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 SNX2O60749 519 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 SMPD1P17405 629 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 CALB2P22676 271 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 GRM5P41594 1212 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 TUBP50607 506 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 CSE1LP55060 971 aaKnown RBP11.31□□□□□ -0.6
COL27A1-204ENST00000477421 MPP2Q14168 576 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 ACCSLQ4AC99 568 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 DUSP28Q4G0W2 176 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 MSS51Q4VC12 460 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 SCUBE1Q8IWY4 988 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 PPTC7Q8NI37 304 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 CMTM5Q96DZ9 223 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 CAB39LQ9H9S4 337 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 UGT1A7Q9HAW7 530 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 UGT1A10Q9HAW8 530 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 UGT1A8Q9HAW9 530 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 SLC17A6Q9P2U8 582 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 SIX4Q9UIU6 781 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 PCDHGC3Q9UN70 934 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 STARD13Q9Y3M8 1113 aa11.31□□□□□ -0.6
COL27A1-204ENST00000477421 GOLGB1Q14789 3259 aaKnown RBP11.3□□□□□ -0.6
COL27A1-204ENST00000477421 MTSS1O43312 755 aa11.3□□□□□ -0.6
COL27A1-204ENST00000477421 KLHL2O95198 593 aa11.3□□□□□ -0.6
COL27A1-204ENST00000477421 NAGLUP54802 743 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms