RNA–Protein interactions for RNA: ENST00000477403.1

RPL39-203, Transcript of ribosomal protein L39, humanhuman

TSL 3

Gene RPL39, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-203ENST00000477403 NSUN6Q8TEA1 469 aaKnown RBP4.29□□□□□ -1.72
RPL39-203ENST00000477403 NTN5Q8WTR8 489 aaPredicted RBP4.29□□□□□ -1.72
RPL39-203ENST00000477403 HERVK_113Q902F9 699 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 C12orf42Q96LP6 360 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 HEPHQ9BQS7 1158 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 MTIF3Q9H2K0 278 aaKnown RBP4.29□□□□□ -1.72
RPL39-203ENST00000477403 SLAMF7Q9NQ25 335 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 HOXC10Q9NYD6 342 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 FLRT1Q9NZU1 646 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 FOXJ2Q9P0K8 574 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 ANKRD6Q9Y2G4 727 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 NEU2Q9Y3R4 380 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 COX11Q9Y6N1 276 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 MUC6Q6W4X9 2439 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 ABHD14A-ACY1A0A1B0GW23 586 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 LRRC14BA6NHZ5 514 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 F2RL2O00254 374 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 SUN1O94901 812 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 SNUPNO95149 360 aaKnown RBP4.28□□□□□ -1.72
RPL39-203ENST00000477403 ZRANB2O95218 330 aaKnown RBP eCLIP4.28□□□□□ -1.72
RPL39-203ENST00000477403 BAG3O95817 575 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 GNAI3P08754 354 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 RARBP10826 455 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 FBLP22087 321 aaKnown RBP4.28□□□□□ -1.72
RPL39-203ENST00000477403 ITGB8P26012 769 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 SMARCA1P28370 1054 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 CD38P28907 300 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 IL15P40933 162 aaPredicted RBP4.28□□□□□ -1.72
RPL39-203ENST00000477403 FOLR3P41439 243 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 CASP2P42575 452 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 RFX5P48382 616 aaPredicted RBP4.28□□□□□ -1.72
RPL39-203ENST00000477403 ANXA11P50995 505 aaKnown RBP4.28□□□□□ -1.72
RPL39-203ENST00000477403 GEMIN4P57678 1058 aaKnown RBP4.28□□□□□ -1.72
RPL39-203ENST00000477403 PSMC1P62191 440 aaKnown RBP4.28□□□□□ -1.72
RPL39-203ENST00000477403 MC2RQ01718 297 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 POU5F1Q01860 360 aaKnown RBP4.28□□□□□ -1.72
RPL39-203ENST00000477403 DSC2Q02487 901 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 MECOMQ03112 1051 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 EXOSC9Q06265 439 aaKnown RBP4.28□□□□□ -1.72
RPL39-203ENST00000477403 DYRK1AQ13627 763 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 GTF2H3Q13889 308 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 ARHGAP29Q52LW3 1261 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 ZNF362Q5T0B9 420 aaPredicted RBP4.28□□□□□ -1.72
RPL39-203ENST00000477403 TAPT1Q6NXT6 567 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 XRRA1Q6P2D8 792 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 C1orf228Q6PIY5 440 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 SLC30A10Q6XR72 485 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 CATSPERGQ6ZRH7 1159 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 CCDC129Q6ZRS4 1044 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 FAM43BQ6ZT52 329 aaPredicted RBP4.28□□□□□ -1.72
RPL39-203ENST00000477403 ATG9AQ7Z3C6 839 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 ADGRG5Q8IZF4 528 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 TRPV1Q8NER1 839 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 PARD3BQ8TEW8 1205 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 TFAP2BQ92481 460 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 SNX19Q92543 992 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 NELL1Q92832 810 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 TTC17Q96AE7 1141 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 FBXL20Q96IG2 436 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 PDLIM2Q96JY6 352 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 SNX27Q96L92 541 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 SCLT1Q96NL6 688 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 TRIB1Q96RU8 372 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 SMOQ99835 787 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 SELENOOQ9BVL4 669 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 SPATA5L1Q9BVQ7 753 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 USP44Q9H0E7 712 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 MROH8Q9H579 483 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 EPHX3Q9H6B9 360 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 BRD9Q9H8M2 597 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 ALG13Q9NP73 1137 aaKnown RBP4.28□□□□□ -1.72
RPL39-203ENST00000477403 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.28□□□□□ -1.72
RPL39-203ENST00000477403 ABCF2Q9UG63 623 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 COG5Q9UP83 839 aa4.28□□□□□ -1.72
RPL39-203ENST00000477403 MORC2Q9Y6X9 1032 aaPredicted RBP4.28□□□□□ -1.72
RPL39-203ENST00000477403 CDH23Q9H251 3354 aa4.27□□□□□ -1.73
RPL39-203ENST00000477403 ELP1O95163 1332 aa4.27□□□□□ -1.73
RPL39-203ENST00000477403 MROH7Q68CQ1 1323 aa4.27□□□□□ -1.73
RPL39-203ENST00000477403 ZNF785A8K8V0 405 aa4.27□□□□□ -1.73
RPL39-203ENST00000477403 E9PLN8 166 aa4.27□□□□□ -1.73
RPL39-203ENST00000477403 SMIM22K7EJ46 135 aa4.27□□□□□ -1.73
RPL39-203ENST00000477403 EPB41L2O43491 1005 aaKnown RBP4.27□□□□□ -1.73
RPL39-203ENST00000477403 ORC4O43929 436 aa4.27□□□□□ -1.73
RPL39-203ENST00000477403 PQBP1O60828 265 aaKnown RBP4.27□□□□□ -1.73
RPL39-203ENST00000477403 DTNBO60941 627 aa4.27□□□□□ -1.73
RPL39-203ENST00000477403 RNASEH2AO75792 299 aaKnown RBP4.27□□□□□ -1.73
RPL39-203ENST00000477403 CNMDO75829 334 aa4.27□□□□□ -1.73
RPL39-203ENST00000477403 ARIH2O95376 493 aa4.27□□□□□ -1.73
RPL39-203ENST00000477403 IGLV2-14P01704 120 aa4.27□□□□□ -1.73
RPL39-203ENST00000477403 ZNF37AP17032 561 aaPredicted RBP4.27□□□□□ -1.73
RPL39-203ENST00000477403 VCAM1P19320 739 aa4.27□□□□□ -1.73
RPL39-203ENST00000477403 PHKA1P46020 1223 aa4.27□□□□□ -1.73
RPL39-203ENST00000477403 CACNA2D1P54289 1103 aa4.27□□□□□ -1.73
RPL39-203ENST00000477403 C21orf58P58505 322 aa4.27□□□□□ -1.73
RPL39-203ENST00000477403 COG2Q14746 738 aa4.27□□□□□ -1.73
RPL39-203ENST00000477403 MVPQ14764 893 aaKnown RBP4.27□□□□□ -1.73
RPL39-203ENST00000477403 THEMIS2Q5TEJ8 643 aa4.27□□□□□ -1.73
RPL39-203ENST00000477403 KAZNQ674X7 775 aa4.27□□□□□ -1.73
RPL39-203ENST00000477403 KRTAP5-3Q6L8H2 238 aa4.27□□□□□ -1.73
RPL39-203ENST00000477403 VWA1Q6PCB0 445 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms