RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 SETSIPP0DME0 302 aa12.09□□□□□ -0.47
LSM2-212ENST00000477182 HAPLN1P10915 354 aaPredicted RBP12.09□□□□□ -0.47
LSM2-212ENST00000477182 CD59P13987 128 aa12.09□□□□□ -0.47
LSM2-212ENST00000477182 DDX6P26196 483 aaKnown RBP eCLIP12.09□□□□□ -0.473e-8■■■■□ 20
LSM2-212ENST00000477182 ANXA13P27216 316 aa12.09□□□□□ -0.47
LSM2-212ENST00000477182 CDH5P33151 784 aaPredicted RBP12.09□□□□□ -0.47
LSM2-212ENST00000477182 CYLC1P35663 651 aaPredicted RBP12.09□□□□□ -0.47
LSM2-212ENST00000477182 GRIK1P39086 918 aa12.09□□□□□ -0.47
LSM2-212ENST00000477182 P2RY2P41231 377 aa12.09□□□□□ -0.47
LSM2-212ENST00000477182 MAGEA11P43364 429 aa12.09□□□□□ -0.47
LSM2-212ENST00000477182 GPR15P49685 360 aa12.09□□□□□ -0.47
LSM2-212ENST00000477182 RGS7P49802 495 aa12.09□□□□□ -0.47
LSM2-212ENST00000477182 CYP4F8P98187 520 aa12.09□□□□□ -0.47
LSM2-212ENST00000477182 VEPH1Q14D04 833 aa12.09□□□□□ -0.47
LSM2-212ENST00000477182 SLC18A3Q16572 532 aa12.09□□□□□ -0.47
LSM2-212ENST00000477182 MGAT5BQ3V5L5 792 aa12.09□□□□□ -0.47
LSM2-212ENST00000477182 CLEC20AQ6ZU45 233 aa12.09□□□□□ -0.47
LSM2-212ENST00000477182 DNAAF5Q86Y56 855 aa12.09□□□□□ -0.47
LSM2-212ENST00000477182 SCN4BQ8IWT1 228 aa12.09□□□□□ -0.47
LSM2-212ENST00000477182 SCUBE3Q8IX30 993 aa12.09□□□□□ -0.47
LSM2-212ENST00000477182 TMEFF1Q8IYR6 380 aa12.09□□□□□ -0.47
LSM2-212ENST00000477182 WDTC1Q8N5D0 677 aa12.09□□□□□ -0.47
LSM2-212ENST00000477182 MINDY1Q8N5J2 469 aa12.09□□□□□ -0.47
LSM2-212ENST00000477182 TMEM35BQ8NCS4 154 aa12.09□□□□□ -0.47
LSM2-212ENST00000477182 ZMIZ2Q8NF64 920 aa12.09□□□□□ -0.47
LSM2-212ENST00000477182 MDGA1Q8NFP4 955 aa12.09□□□□□ -0.47
LSM2-212ENST00000477182 KCNK16Q96T55 309 aa12.09□□□□□ -0.47
LSM2-212ENST00000477182 SEPT5Q99719 369 aaPredicted RBP12.09□□□□□ -0.47
LSM2-212ENST00000477182 SLC46A2Q9BY10 475 aa12.09□□□□□ -0.47
LSM2-212ENST00000477182 SMG9Q9H0W8 520 aaKnown RBP12.09□□□□□ -0.47
LSM2-212ENST00000477182 DMAP1Q9NPF5 467 aaPredicted RBP12.09□□□□□ -0.47
LSM2-212ENST00000477182 DNAAF2Q9NVR5 837 aaKnown RBP12.09□□□□□ -0.47
LSM2-212ENST00000477182 TAS2R14Q9NYV8 317 aa12.09□□□□□ -0.47
LSM2-212ENST00000477182 CYTH4Q9UIA0 394 aa12.09□□□□□ -0.47
LSM2-212ENST00000477182 EPN1Q9Y6I3 576 aaPredicted RBP12.09□□□□□ -0.47
LSM2-212ENST00000477182 PLXND1Q9Y4D7 1925 aa12.08□□□□□ -0.48
LSM2-212ENST00000477182 CAPN8A6NHC0 703 aa12.08□□□□□ -0.48
LSM2-212ENST00000477182 CYSRT1A8MQ03 144 aa12.08□□□□□ -0.48
LSM2-212ENST00000477182 F8VP50 259 aa12.08□□□□□ -0.48
LSM2-212ENST00000477182 XPO1O14980 1071 aaKnown RBP12.08□□□□□ -0.48
LSM2-212ENST00000477182 ATXN7O15265 892 aaPredicted RBP12.08□□□□□ -0.48
LSM2-212ENST00000477182 ARHGAP6O43182 974 aa12.08□□□□□ -0.48
LSM2-212ENST00000477182 C1QL1O75973 258 aa12.08□□□□□ -0.48
LSM2-212ENST00000477182 NDUFA10O95299 355 aa12.08□□□□□ -0.48
LSM2-212ENST00000477182 SYPP08247 313 aa12.08□□□□□ -0.48
LSM2-212ENST00000477182 UNGP13051 313 aaPredicted RBP12.08□□□□□ -0.48
LSM2-212ENST00000477182 ARSAP15289 507 aa12.08□□□□□ -0.48
LSM2-212ENST00000477182 PTGER3P43115 390 aa12.08□□□□□ -0.48
LSM2-212ENST00000477182 GPD2P43304 727 aa12.08□□□□□ -0.48
LSM2-212ENST00000477182 TUFMP49411 452 aaKnown RBP12.08□□□□□ -0.48
LSM2-212ENST00000477182 SLC8A3P57103 927 aa12.08□□□□□ -0.48
LSM2-212ENST00000477182 TAF12Q16514 161 aa12.08□□□□□ -0.48
LSM2-212ENST00000477182 DDR2Q16832 855 aa12.08□□□□□ -0.48
LSM2-212ENST00000477182 CCDC122Q5T0U0 273 aa12.08□□□□□ -0.48
LSM2-212ENST00000477182 SDHAF4Q5VUM1 108 aa12.08□□□□□ -0.48
LSM2-212ENST00000477182 ACAD10Q6JQN1 1059 aa12.08□□□□□ -0.48
LSM2-212ENST00000477182 PMF1Q6P1K2 205 aa12.08□□□□□ -0.48
LSM2-212ENST00000477182 ALKBH5Q6P6C2 394 aaKnown RBP12.08□□□□□ -0.48
LSM2-212ENST00000477182 VSTM1Q6UX27 236 aa12.08□□□□□ -0.48
LSM2-212ENST00000477182 ARMCX6Q7L4S7 300 aa12.08□□□□□ -0.48
LSM2-212ENST00000477182 USP33Q8TEY7 942 aa12.08□□□□□ -0.48
LSM2-212ENST00000477182 SLC35F5Q8WV83 523 aa12.08□□□□□ -0.48
LSM2-212ENST00000477182 ECT2Q9H8V3 914 aa12.08□□□□□ -0.48
LSM2-212ENST00000477182 CSNK1G1Q9HCP0 422 aa12.08□□□□□ -0.48
LSM2-212ENST00000477182 ST7Q9NRC1 585 aa12.08□□□□□ -0.48
LSM2-212ENST00000477182 TDP1Q9NUW8 608 aa12.08□□□□□ -0.48
LSM2-212ENST00000477182 NAGPAQ9UK23 515 aa12.08□□□□□ -0.48
LSM2-212ENST00000477182 MMP17Q9ULZ9 603 aa12.08□□□□□ -0.48
LSM2-212ENST00000477182 NENFQ9UMX5 172 aa12.08□□□□□ -0.48
LSM2-212ENST00000477182 PTPRBP23467 1997 aa12.08□□□□□ -0.48
LSM2-212ENST00000477182 OBSL1O75147 1896 aa12.08□□□□□ -0.48
LSM2-212ENST00000477182 DENND4CQ5VZ89 1909 aa12.07□□□□□ -0.48
LSM2-212ENST00000477182 EIF3CLB5ME19 914 aaKnown RBP12.07□□□□□ -0.48
LSM2-212ENST00000477182 HHLA1C9JL84 531 aa12.07□□□□□ -0.48
LSM2-212ENST00000477182 PIK3R2O00459 728 aa12.07□□□□□ -0.48
LSM2-212ENST00000477182 ARHGAP33O14559 1287 aa12.07□□□□□ -0.48
LSM2-212ENST00000477182 TRIM66O15016 1216 aa12.07□□□□□ -0.48
LSM2-212ENST00000477182 RTN2O75298 545 aa12.07□□□□□ -0.48
LSM2-212ENST00000477182 GABBR2O75899 941 aa12.07□□□□□ -0.48
LSM2-212ENST00000477182 FTLP02792 175 aaPredicted RBP12.07□□□□□ -0.48
LSM2-212ENST00000477182 GZMAP12544 262 aa12.07□□□□□ -0.48
LSM2-212ENST00000477182 ABCG1P45844 678 aa12.07□□□□□ -0.48
LSM2-212ENST00000477182 NSFP46459 744 aaKnown RBP12.07□□□□□ -0.48
LSM2-212ENST00000477182 PLA2G4AP47712 749 aa12.07□□□□□ -0.48
LSM2-212ENST00000477182 CENPCQ03188 943 aa12.07□□□□□ -0.48
LSM2-212ENST00000477182 NR1H3Q13133 447 aa12.07□□□□□ -0.48
LSM2-212ENST00000477182 PDCLQ13371 301 aa12.07□□□□□ -0.48
LSM2-212ENST00000477182 SPA17Q15506 151 aa12.07□□□□□ -0.48
LSM2-212ENST00000477182 CRY1Q16526 586 aa12.07□□□□□ -0.48
LSM2-212ENST00000477182 PTPN20Q4JDL3 420 aa12.07□□□□□ -0.48
LSM2-212ENST00000477182 C2CD6Q53TS8 623 aa12.07□□□□□ -0.48
LSM2-212ENST00000477182 MMS22LQ6ZRQ5 1243 aa12.07□□□□□ -0.48
LSM2-212ENST00000477182 TOGARAM2Q6ZUX3 1019 aa12.07□□□□□ -0.48
LSM2-212ENST00000477182 GPRIN1Q7Z2K8 1008 aa12.07□□□□□ -0.48
LSM2-212ENST00000477182 PIGZQ86VD9 579 aa12.07□□□□□ -0.48
LSM2-212ENST00000477182 ERICH1Q86X53 443 aa12.07□□□□□ -0.48
LSM2-212ENST00000477182 PNPLA1Q8N8W4 532 aa12.07□□□□□ -0.48
LSM2-212ENST00000477182 STKLD1Q8NE28 680 aa12.07□□□□□ -0.48
LSM2-212ENST00000477182 ACRBPQ8NEB7 543 aa12.07□□□□□ -0.48
LSM2-212ENST00000477182 EZH1Q92800 747 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms