RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 TEX51A0A1B0GUA7 166 aa17.19■□□□□ 0.34
APOBEC3F-203ENST00000476513 CYSRT1A8MQ03 144 aa17.19■□□□□ 0.34
APOBEC3F-203ENST00000476513 CAPN9O14815 690 aa17.19■□□□□ 0.34
APOBEC3F-203ENST00000476513 WNT1P04628 370 aa17.19■□□□□ 0.34
APOBEC3F-203ENST00000476513 ITGAVP06756 1048 aa17.19■□□□□ 0.34
APOBEC3F-203ENST00000476513 CASP1P29466 404 aa17.19■□□□□ 0.34
APOBEC3F-203ENST00000476513 PDE4CQ08493 712 aa17.19■□□□□ 0.34
APOBEC3F-203ENST00000476513 TTC31Q49AM3 519 aaPredicted RBP17.19■□□□□ 0.34
APOBEC3F-203ENST00000476513 MPPE1Q53F39 396 aa17.19■□□□□ 0.34
APOBEC3F-203ENST00000476513 FBXL19Q6PCT2 694 aa17.19■□□□□ 0.34
APOBEC3F-203ENST00000476513 SV2AQ7L0J3 742 aa17.19■□□□□ 0.34
APOBEC3F-203ENST00000476513 CHST9Q7L1S5 443 aa17.19■□□□□ 0.34
APOBEC3F-203ENST00000476513 RSRC2Q7L4I2 434 aaKnown RBP17.19■□□□□ 0.34
APOBEC3F-203ENST00000476513 ZC3H3Q8IXZ2 948 aaKnown RBP17.19■□□□□ 0.34
APOBEC3F-203ENST00000476513 SAP25Q8TEE9 199 aa17.19■□□□□ 0.34
APOBEC3F-203ENST00000476513 TSC1Q92574 1164 aa17.19■□□□□ 0.34
APOBEC3F-203ENST00000476513 ARID3AQ99856 593 aa17.19■□□□□ 0.34
APOBEC3F-203ENST00000476513 BLZF1Q9H2G9 400 aa17.19■□□□□ 0.34
APOBEC3F-203ENST00000476513 ABCB8Q9NUT2 735 aa17.19■□□□□ 0.34
APOBEC3F-203ENST00000476513 DMAC2Q9NW81 257 aa17.19■□□□□ 0.34
APOBEC3F-203ENST00000476513 A0A1W2PPC4 97 aa17.18■□□□□ 0.34
APOBEC3F-203ENST00000476513 J3QKU1 62 aa17.18■□□□□ 0.34
APOBEC3F-203ENST00000476513 HLA-DRAP01903 254 aa17.18■□□□□ 0.34
APOBEC3F-203ENST00000476513 ABCB4P21439 1286 aa17.18■□□□□ 0.34
APOBEC3F-203ENST00000476513 PIK3CAP42336 1068 aa17.18■□□□□ 0.34
APOBEC3F-203ENST00000476513 NASPP49321 788 aaPredicted RBP17.18■□□□□ 0.34
APOBEC3F-203ENST00000476513 CFHR1Q03591 330 aa17.18■□□□□ 0.34
APOBEC3F-203ENST00000476513 TRIP4Q15650 581 aaPredicted RBP17.18■□□□□ 0.34
APOBEC3F-203ENST00000476513 PPP1R26Q5T8A7 1209 aaPredicted RBP17.18■□□□□ 0.34
APOBEC3F-203ENST00000476513 ZNF776Q68DI1 518 aaPredicted RBP17.18■□□□□ 0.34
APOBEC3F-203ENST00000476513 KIAA0907Q7Z7F0 614 aaPredicted RBP17.18■□□□□ 0.34
APOBEC3F-203ENST00000476513 ARHGAP18Q8N392 663 aa17.18■□□□□ 0.34
APOBEC3F-203ENST00000476513 EID2Q8N6I1 236 aa17.18■□□□□ 0.34
APOBEC3F-203ENST00000476513 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.18■□□□□ 0.34
APOBEC3F-203ENST00000476513 IQUBQ8NA54 791 aa17.18■□□□□ 0.34
APOBEC3F-203ENST00000476513 GOLGA5Q8TBA6 731 aa17.18■□□□□ 0.34
APOBEC3F-203ENST00000476513 GOLGA1Q92805 767 aa17.18■□□□□ 0.34
APOBEC3F-203ENST00000476513 FGF11Q92914 225 aa17.18■□□□□ 0.34
APOBEC3F-203ENST00000476513 PLD4Q96BZ4 506 aa17.18■□□□□ 0.34
APOBEC3F-203ENST00000476513 EBF2Q9HAK2 575 aa17.18■□□□□ 0.34
APOBEC3F-203ENST00000476513 APOBEC3GQ9HC16 384 aaKnown RBP17.18■□□□□ 0.34
APOBEC3F-203ENST00000476513 GGA2Q9UJY4 613 aa17.18■□□□□ 0.34
APOBEC3F-203ENST00000476513 FAM47DPA6NHR8 397 aa17.17■□□□□ 0.34
APOBEC3F-203ENST00000476513 DLDP09622 509 aaKnown RBP17.17■□□□□ 0.34
APOBEC3F-203ENST00000476513 SYT1P21579 422 aa17.17■□□□□ 0.34
APOBEC3F-203ENST00000476513 YWHAGP61981 247 aaKnown RBP eCLIP17.17■□□□□ 0.34
APOBEC3F-203ENST00000476513 TLE3Q04726 772 aa17.17■□□□□ 0.34
APOBEC3F-203ENST00000476513 TMC2Q8TDI7 906 aa17.17■□□□□ 0.34
APOBEC3F-203ENST00000476513 SKA1Q96BD8 255 aa17.17■□□□□ 0.34
APOBEC3F-203ENST00000476513 BACH2Q9BYV9 841 aa17.17■□□□□ 0.34
APOBEC3F-203ENST00000476513 PABPC3Q9H361 631 aaKnown RBP17.17■□□□□ 0.34
APOBEC3F-203ENST00000476513 MTG2Q9H4K7 406 aa17.17■□□□□ 0.34
APOBEC3F-203ENST00000476513 CYP3A43Q9HB55 503 aa17.17■□□□□ 0.34
APOBEC3F-203ENST00000476513 NCKAP1Q9Y2A7 1128 aa17.17■□□□□ 0.34
APOBEC3F-203ENST00000476513 BRINP1O60477 761 aa17.16■□□□□ 0.34
APOBEC3F-203ENST00000476513 PABPC1P11940 636 aaKnown RBP17.16■□□□□ 0.34
APOBEC3F-203ENST00000476513 CD58P19256 250 aa17.16■□□□□ 0.34
APOBEC3F-203ENST00000476513 GALCP54803 685 aa17.16■□□□□ 0.34
APOBEC3F-203ENST00000476513 CCDC173Q0VFZ6 552 aa17.16■□□□□ 0.34
APOBEC3F-203ENST00000476513 CUL4AQ13619 759 aa17.16■□□□□ 0.34
APOBEC3F-203ENST00000476513 STK38Q15208 465 aa17.16■□□□□ 0.34
APOBEC3F-203ENST00000476513 C1orf220Q5T0J3 134 aa17.16■□□□□ 0.34
APOBEC3F-203ENST00000476513 MBLAC2Q68D91 279 aa17.16■□□□□ 0.34
APOBEC3F-203ENST00000476513 NCEH1Q6PIU2 408 aa17.16■□□□□ 0.34
APOBEC3F-203ENST00000476513 USP30Q70CQ3 517 aa17.16■□□□□ 0.34
APOBEC3F-203ENST00000476513 SLC9A9Q8IVB4 645 aa17.16■□□□□ 0.34
APOBEC3F-203ENST00000476513 AHI1Q8N157 1196 aa17.16■□□□□ 0.34
APOBEC3F-203ENST00000476513 LINC00301Q8NCQ3 95 aa17.16■□□□□ 0.34
APOBEC3F-203ENST00000476513 GANCQ8TET4 914 aa17.16■□□□□ 0.34
APOBEC3F-203ENST00000476513 TMA16Q96EY4 203 aaKnown RBP17.16■□□□□ 0.34
APOBEC3F-203ENST00000476513 TMEM176AQ96HP8 235 aa17.16■□□□□ 0.34
APOBEC3F-203ENST00000476513 RSPH9Q9H1X1 276 aaPredicted RBP17.16■□□□□ 0.34
APOBEC3F-203ENST00000476513 AASDHPPTQ9NRN7 309 aa17.16■□□□□ 0.34
APOBEC3F-203ENST00000476513 FBXL12Q9NXK8 326 aa17.16■□□□□ 0.34
APOBEC3F-203ENST00000476513 SERGEFQ9UGK8 458 aa17.16■□□□□ 0.34
APOBEC3F-203ENST00000476513 SUN2Q9UH99 717 aa17.16■□□□□ 0.34
APOBEC3F-203ENST00000476513 PVALEFA0A1B0GWK0 134 aa17.15■□□□□ 0.34
APOBEC3F-203ENST00000476513 A0A1W2PR77 199 aa17.15■□□□□ 0.34
APOBEC3F-203ENST00000476513 WNT9AO14904 365 aa17.15■□□□□ 0.34
APOBEC3F-203ENST00000476513 IKBKBO14920 756 aa17.15■□□□□ 0.34
APOBEC3F-203ENST00000476513 YKT6O15498 198 aa17.15■□□□□ 0.34
APOBEC3F-203ENST00000476513 ATP5BP06576 529 aaKnown RBP17.15■□□□□ 0.34
APOBEC3F-203ENST00000476513 EPHA8P29322 1005 aaPredicted RBP17.15■□□□□ 0.34
APOBEC3F-203ENST00000476513 HARS2P49590 506 aaKnown RBP17.15■□□□□ 0.34
APOBEC3F-203ENST00000476513 CXADRP78310 365 aa17.15■□□□□ 0.34
APOBEC3F-203ENST00000476513 RAB41Q5JT25 222 aa17.15■□□□□ 0.34
APOBEC3F-203ENST00000476513 ERICH1Q86X53 443 aa17.15■□□□□ 0.34
APOBEC3F-203ENST00000476513 FMNL3Q8IVF7 1028 aa17.15■□□□□ 0.34
APOBEC3F-203ENST00000476513 SPACA3Q8IXA5 215 aa17.15■□□□□ 0.34
APOBEC3F-203ENST00000476513 TMEM174Q8WUU8 243 aa17.15■□□□□ 0.34
APOBEC3F-203ENST00000476513 NIF3L1Q9GZT8 377 aa17.15■□□□□ 0.34
APOBEC3F-203ENST00000476513 GDF3Q9NR23 364 aa17.15■□□□□ 0.34
APOBEC3F-203ENST00000476513 STOML2Q9UJZ1 356 aa17.15■□□□□ 0.34
APOBEC3F-203ENST00000476513 NAV2Q8IVL1 2488 aa17.14■□□□□ 0.34
APOBEC3F-203ENST00000476513 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.14■□□□□ 0.33
APOBEC3F-203ENST00000476513 CAPN8A6NHC0 703 aa17.14■□□□□ 0.33
APOBEC3F-203ENST00000476513 SPTLC2O15270 562 aa17.14■□□□□ 0.33
APOBEC3F-203ENST00000476513 POLR2EP19388 210 aaKnown RBP17.14■□□□□ 0.33
APOBEC3F-203ENST00000476513 CD38P28907 300 aa17.14■□□□□ 0.33
APOBEC3F-203ENST00000476513 CD70P32970 193 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms