RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-208	ENST00000475997	GTF2H1	P32780	548 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	RFC5	P40937	340 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	MAPKAPK2	P49137	400 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	HSD17B4	P51659	736 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	GMFB	P60983	142 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	TNFAIP2	Q03169	654 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	TRAF2	Q12933	501 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	QPRT	Q15274	297 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	TSN	Q15631	228 aa	Known RBP	6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	DUOXA2	Q1HG44	320 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	THOC7	Q6I9Y2	204 aa	Known RBP	6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	C3orf62	Q6ZUJ4	267 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	SIAH1	Q8IUQ4	282 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	DHRSX	Q8N5I4	330 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	SEMA4D	Q92854	862 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	PTPRN2	Q92932	1015 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ZKSCAN4	Q969J2	545 aa	Predicted RBP	6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	CENPT	Q96BT3	561 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ASIC4	Q96FT7	647 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	RMND5A	Q9H871	391 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	DMAC2	Q9NW81	257 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	WRAP73	Q9P2S5	460 aa	Predicted RBP	6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	BAIAP2	Q9UQB8	552 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	FOXO6	A8MYZ6	492 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	MTSS1	O43312	755 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	EXTL3	O43909	919 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	IL5RA	Q01344	420 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	CUL2	Q13617	745 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	PTK6	Q13882	451 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	EMC2	Q15006	297 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	FAM83E	Q2M2I3	478 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	RNF219	Q5W0B1	726 aa	Predicted RBP	6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	CDC73	Q6P1J9	531 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	RNASE11	Q8TAA1	199 aa	Known RBP	6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ATXN2L	Q8WWM7	1075 aa	Known RBP	6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	PGBD4	Q96DM1	585 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	KLHL32	Q96NJ5	620 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	NAT9	Q9BTE0	207 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	MRI	Q9BWK5	157 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	DCLK3	Q9C098	648 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	WDR12	Q9GZL7	423 aa	Known RBP	6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	POLR1B	Q9H9Y6	1135 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	RNPEPL1	Q9HAU8	725 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	FBXO40	Q9UH90	709 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	PFDN2	Q9UHV9	154 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	CLEC11A	Q9Y240	323 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	EIF3L	Q9Y262	564 aa	Known RBP	6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	VPS9D1	Q9Y2B5	631 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	HEATR9	A2RTY3	570 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	SNX3	O60493	162 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	CST8	O60676	142 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	LDLR	P01130	860 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	APRT	P07741	180 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	MAPT	P10636	758 aa	Known RBP	6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	MLN	P12872	115 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	CCNA2	P20248	432 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	IL12A	P29459	219 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	CHKA	P35790	457 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	MMP13	P45452	471 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	PRIM2	P49643	509 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	STAR	P49675	285 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	GTF2B	Q00403	316 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	RRP1B	Q14684	758 aa	Known RBP	6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	NR1D2	Q14995	579 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	RASA2	Q15283	850 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	CCNG2	Q16589	344 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	NFIL3	Q16649	462 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	WDR72	Q3MJ13	1102 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	FAM98B	Q52LJ0	330 aa	Known RBP	6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	CACHD1	Q5VU97	1274 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	MZT2A	Q6P582	158 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	KLHL24	Q6TFL4	600 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	PEG10	Q86TG7	708 aa	Known RBP	6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ZNF677	Q86XU0	584 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	KY	Q8NBH2	561 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	KBTBD8	Q8NFY9	601 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	OR6B3	Q8NGW1	331 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	CENPI	Q92674	756 aa	Predicted RBP	6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	RAB6B	Q9NRW1	208 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	NINJ2	Q9NZG7	142 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ZNRF3	Q9ULT6	936 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	GSTK1	Q9Y2Q3	226 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ITGB4	P16144	1822 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	CACNA1S	Q13698	1873 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997		E9PBE3	544 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	PRPF4	O43172	522 aa	Known RBP eCLIP	6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	MAPK1	P28482	360 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ZNF846	Q147U1	533 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	NDUFAF6	Q330K2	333 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ATP13A4	Q4VNC1	1196 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	DGKK	Q5KSL6	1271 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	SPDYC	Q5MJ68	293 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	DCAF12L1	Q5VU92	463 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	BICRAL	Q6AI39	1079 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	STYK1	Q6J9G0	422 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	GPAT2	Q6NUI2	795 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	LAYN	Q6UX15	382 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	GADL1	Q6ZQY3	521 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	UBE2Q1	Q7Z7E8	422 aa		6.25	□□□□□ -1.41
HNRNPU-208	ENST00000475997	SYTL1	Q8IYJ3	562 aa		6.25	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms