RNA–Protein interactions for RNA: ENST00000475875.1

CSNK2B-207, Transcript of casein kinase 2 beta, humanhuman

TSL 1 (best)

Gene CSNK2B, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2B-207ENST00000475875 MED10Q9BTT4 135 aa15.19■□□□□ 0.02
CSNK2B-207ENST00000475875 MRPL44Q9H9J2 332 aaKnown RBP15.19■□□□□ 0.02
CSNK2B-207ENST00000475875 CSNK1G1Q9HCP0 422 aa15.19■□□□□ 0.02
CSNK2B-207ENST00000475875 PRSS16Q9NQE7 514 aa15.19■□□□□ 0.02
CSNK2B-207ENST00000475875 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.19■□□□□ 0.02
CSNK2B-207ENST00000475875 PCDHB13Q9Y5F0 798 aa15.19■□□□□ 0.02
CSNK2B-207ENST00000475875 RELNP78509 3460 aa15.19■□□□□ 0.02
CSNK2B-207ENST00000475875 CREBBPQ92793 2442 aa15.19■□□□□ 0.02
CSNK2B-207ENST00000475875 ZNF233A6NK53 670 aa15.18■□□□□ 0.02
CSNK2B-207ENST00000475875 OPA1O60313 960 aa15.18■□□□□ 0.02
CSNK2B-207ENST00000475875 MAGEC1O60732 1142 aa15.18■□□□□ 0.02
CSNK2B-207ENST00000475875 KLKB1P03952 638 aa15.18■□□□□ 0.02
CSNK2B-207ENST00000475875 ITGB2P05107 769 aa15.18■□□□□ 0.02
CSNK2B-207ENST00000475875 GP1BAP07359 652 aa15.18■□□□□ 0.02
CSNK2B-207ENST00000475875 CR2P20023 1033 aa15.18■□□□□ 0.02
CSNK2B-207ENST00000475875 RBMS1P29558 406 aaKnown RBP15.18■□□□□ 0.02
CSNK2B-207ENST00000475875 MLLT3P42568 568 aaPredicted RBP15.18■□□□□ 0.02
CSNK2B-207ENST00000475875 COG7P83436 770 aa15.18■□□□□ 0.02
CSNK2B-207ENST00000475875 DAB2P98082 770 aa15.18■□□□□ 0.02
CSNK2B-207ENST00000475875 OVGP1Q12889 678 aa15.18■□□□□ 0.02
CSNK2B-207ENST00000475875 WDR72Q3MJ13 1102 aa15.18■□□□□ 0.02
CSNK2B-207ENST00000475875 NCEH1Q6PIU2 408 aa15.18■□□□□ 0.02
CSNK2B-207ENST00000475875 IQCHQ86VS3 1027 aa15.18■□□□□ 0.02
CSNK2B-207ENST00000475875 ZMIZ2Q8NF64 920 aa15.18■□□□□ 0.02
CSNK2B-207ENST00000475875 LARP4BQ92615 738 aaKnown RBP15.18■□□□□ 0.02
CSNK2B-207ENST00000475875 CDK5RAP1Q96SZ6 601 aaKnown RBP15.18■□□□□ 0.02
CSNK2B-207ENST00000475875 PABPC3Q9H361 631 aaKnown RBP15.18■□□□□ 0.02
CSNK2B-207ENST00000475875 EBF2Q9HAK2 575 aa15.18■□□□□ 0.02
CSNK2B-207ENST00000475875 KRT82Q9NSB4 513 aa15.18■□□□□ 0.02
CSNK2B-207ENST00000475875 OSER1Q9NX31 292 aa15.18■□□□□ 0.02
CSNK2B-207ENST00000475875 SUN2Q9UH99 717 aa15.18■□□□□ 0.02
CSNK2B-207ENST00000475875 PCDHGA8Q9Y5G5 932 aa15.18■□□□□ 0.02
CSNK2B-207ENST00000475875 PLXNA2O75051 1894 aa15.17■□□□□ 0.02
CSNK2B-207ENST00000475875 SIGLEC6O43699 453 aa15.17■□□□□ 0.02
CSNK2B-207ENST00000475875 CSO75390 466 aaKnown RBP15.17■□□□□ 0.02
CSNK2B-207ENST00000475875 RARGP13631 454 aa15.17■□□□□ 0.02
CSNK2B-207ENST00000475875 GAP43P17677 238 aa15.17■□□□□ 0.02
CSNK2B-207ENST00000475875 ITGB6P18564 788 aa15.17■□□□□ 0.02
CSNK2B-207ENST00000475875 PSEN1P49768 467 aa15.17■□□□□ 0.02
CSNK2B-207ENST00000475875 HS1BP3Q53T59 392 aa15.17■□□□□ 0.02
CSNK2B-207ENST00000475875 C10orf120Q5SQS8 335 aa15.17■□□□□ 0.02
CSNK2B-207ENST00000475875 SYCP3Q8IZU3 236 aa15.17■□□□□ 0.02
CSNK2B-207ENST00000475875 FUKQ8N0W3 1084 aa15.17■□□□□ 0.02
CSNK2B-207ENST00000475875 MFSD2AQ8NA29 543 aa15.17■□□□□ 0.02
CSNK2B-207ENST00000475875 FAM184AQ8NB25 1140 aa15.17■□□□□ 0.02
CSNK2B-207ENST00000475875 HPS3Q969F9 1004 aa15.17■□□□□ 0.02
CSNK2B-207ENST00000475875 SLC46A1Q96NT5 459 aa15.17■□□□□ 0.02
CSNK2B-207ENST00000475875 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.17■□□□□ 0.02
CSNK2B-207ENST00000475875 RSPH9Q9H1X1 276 aaPredicted RBP15.17■□□□□ 0.02
CSNK2B-207ENST00000475875 OLFML3Q9NRN5 406 aa15.17■□□□□ 0.02
CSNK2B-207ENST00000475875 FBXL12Q9NXK8 326 aa15.17■□□□□ 0.02
CSNK2B-207ENST00000475875 FZD4Q9ULV1 537 aa15.17■□□□□ 0.02
CSNK2B-207ENST00000475875 PCDHA5Q9Y5H7 936 aa15.17■□□□□ 0.02
CSNK2B-207ENST00000475875 CLEC18AA5D8T8 446 aa15.16■□□□□ 0.02
CSNK2B-207ENST00000475875 FAM47DPA6NHR8 397 aa15.16■□□□□ 0.02
CSNK2B-207ENST00000475875 CST3P01034 146 aaPredicted RBP15.16■□□□□ 0.02
CSNK2B-207ENST00000475875 CKMT1AP12532 417 aa15.16■□□□□ 0.02
CSNK2B-207ENST00000475875 ATICP31939 592 aa15.16■□□□□ 0.02
CSNK2B-207ENST00000475875 KCNJ12Q14500 433 aa15.16■□□□□ 0.02
CSNK2B-207ENST00000475875 LINC00303Q3SY05 128 aa15.16■□□□□ 0.02
CSNK2B-207ENST00000475875 C4orf17Q53FE4 359 aa15.16■□□□□ 0.02
CSNK2B-207ENST00000475875 CLEC18BQ6UXF7 455 aa15.16■□□□□ 0.02
CSNK2B-207ENST00000475875 FAM217AQ8IXS0 508 aa15.16■□□□□ 0.02
CSNK2B-207ENST00000475875 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.16■□□□□ 0.02
CSNK2B-207ENST00000475875 CLEC18CQ8NCF0 446 aa15.16■□□□□ 0.02
CSNK2B-207ENST00000475875 GANCQ8TET4 914 aa15.16■□□□□ 0.02
CSNK2B-207ENST00000475875 NOC3LQ8WTT2 800 aaKnown RBP15.16■□□□□ 0.02
CSNK2B-207ENST00000475875 DDI1Q8WTU0 396 aa15.16■□□□□ 0.02
CSNK2B-207ENST00000475875 SERAC1Q96JX3 654 aa15.16■□□□□ 0.02
CSNK2B-207ENST00000475875 CCNL2Q96S94 520 aaPredicted RBP15.16■□□□□ 0.02
CSNK2B-207ENST00000475875 SMOQ99835 787 aa15.16■□□□□ 0.02
CSNK2B-207ENST00000475875 USP29Q9HBJ7 922 aa15.16■□□□□ 0.02
CSNK2B-207ENST00000475875 KIAA1586Q9HCI6 787 aa15.16■□□□□ 0.02
CSNK2B-207ENST00000475875 PNPLA8Q9NP80 782 aa15.16■□□□□ 0.02
CSNK2B-207ENST00000475875 AGO1Q9UL18 857 aaKnown RBP15.16■□□□□ 0.02
CSNK2B-207ENST00000475875 CLEC4EQ9ULY5 219 aa15.16■□□□□ 0.02
CSNK2B-207ENST00000475875 TRIM38O00635 465 aa15.15■□□□□ 0.02
CSNK2B-207ENST00000475875 MDM4O15151 490 aa15.15■□□□□ 0.02
CSNK2B-207ENST00000475875 RNASEH1O60930 286 aaKnown RBP15.15■□□□□ 0.02
CSNK2B-207ENST00000475875 GCNT3O95395 438 aa15.15■□□□□ 0.02
CSNK2B-207ENST00000475875 ATP5BP06576 529 aaKnown RBP15.15■□□□□ 0.02
CSNK2B-207ENST00000475875 DLDP09622 509 aaKnown RBP15.15■□□□□ 0.02
CSNK2B-207ENST00000475875 CORO1AP31146 461 aaKnown RBP15.15■□□□□ 0.02
CSNK2B-207ENST00000475875 NUDT1P36639 197 aa15.15■□□□□ 0.02
CSNK2B-207ENST00000475875 ZNF445P59923 1031 aa15.15■□□□□ 0.02
CSNK2B-207ENST00000475875 NAPEPLDQ6IQ20 393 aa15.15■□□□□ 0.02
CSNK2B-207ENST00000475875 AHI1Q8N157 1196 aa15.15■□□□□ 0.02
CSNK2B-207ENST00000475875 OR4C6Q8NH72 309 aa15.15■□□□□ 0.02
CSNK2B-207ENST00000475875 ARHGAP9Q9BRR9 750 aa15.15■□□□□ 0.02
CSNK2B-207ENST00000475875 PCIF1Q9H4Z3 704 aa15.15■□□□□ 0.02
CSNK2B-207ENST00000475875 VRTNQ9H8Y1 702 aa15.15■□□□□ 0.02
CSNK2B-207ENST00000475875 NMUR1Q9HB89 426 aa15.15■□□□□ 0.02
CSNK2B-207ENST00000475875 EVA1BQ9NVM1 165 aa15.15■□□□□ 0.02
CSNK2B-207ENST00000475875 CLIC5Q9NZA1 410 aa15.15■□□□□ 0.02
CSNK2B-207ENST00000475875 ATXN7L1Q9ULK2 861 aaPredicted RBP15.15■□□□□ 0.02
CSNK2B-207ENST00000475875 A0A1W2PQH9 124 aa15.14■□□□□ 0.01
CSNK2B-207ENST00000475875 CDRT15L2A8MXV6 281 aa15.14■□□□□ 0.01
CSNK2B-207ENST00000475875 WNT9AO14904 365 aa15.14■□□□□ 0.01
CSNK2B-207ENST00000475875 CYP26A1O43174 497 aa15.14■□□□□ 0.01
CSNK2B-207ENST00000475875 LATO43561 262 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms