RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 KCNK9Q9NPC2 374 aa7.28□□□□□ -1.24
SMC5-203ENST00000475540 C2CD4BA6NLJ0 364 aa7.27□□□□□ -1.25
SMC5-203ENST00000475540 ST6GAL1P15907 406 aa7.27□□□□□ -1.25
SMC5-203ENST00000475540 KLRK1P26718 216 aa7.27□□□□□ -1.25
SMC5-203ENST00000475540 HOXA7P31268 230 aaPredicted RBP7.27□□□□□ -1.25
SMC5-203ENST00000475540 AKT1P31749 480 aa7.27□□□□□ -1.25
SMC5-203ENST00000475540 TNFAIP2Q03169 654 aa7.27□□□□□ -1.25
SMC5-203ENST00000475540 SPARCL1Q14515 664 aa7.27□□□□□ -1.25
SMC5-203ENST00000475540 RBMS2Q15434 407 aaKnown RBP7.27□□□□□ -1.25
SMC5-203ENST00000475540 ZNF569Q5MCW4 686 aa7.27□□□□□ -1.25
SMC5-203ENST00000475540 PAPD7Q5XG87 772 aaKnown RBP7.27□□□□□ -1.25
SMC5-203ENST00000475540 ANKRD40Q6AI12 368 aa7.27□□□□□ -1.25
SMC5-203ENST00000475540 RFX6Q8HWS3 928 aa7.27□□□□□ -1.25
SMC5-203ENST00000475540 SCNM1Q9BWG6 230 aa7.27□□□□□ -1.25
SMC5-203ENST00000475540 GATA5Q9BWX5 397 aaPredicted RBP7.27□□□□□ -1.25
SMC5-203ENST00000475540 OBP2BQ9NPH6 170 aa7.27□□□□□ -1.25
SMC5-203ENST00000475540 IPO11Q9UI26 975 aaKnown RBP7.27□□□□□ -1.25
SMC5-203ENST00000475540 B3GNT3Q9Y2A9 372 aa7.27□□□□□ -1.25
SMC5-203ENST00000475540 ZMYM2Q9UBW7 1377 aa7.27□□□□□ -1.25
SMC5-203ENST00000475540 EMSYQ7Z589 1322 aa7.27□□□□□ -1.25
SMC5-203ENST00000475540 A0A087WV62 115 aa7.26□□□□□ -1.25
SMC5-203ENST00000475540 SLC22A23A1A5C7 686 aa7.26□□□□□ -1.25
SMC5-203ENST00000475540 AQP12BA6NM10 295 aa7.26□□□□□ -1.25
SMC5-203ENST00000475540 NKX2-8O15522 239 aa7.26□□□□□ -1.25
SMC5-203ENST00000475540 ASNA1O43681 348 aa7.26□□□□□ -1.25
SMC5-203ENST00000475540 AKR1A1P14550 325 aa7.26□□□□□ -1.25
SMC5-203ENST00000475540 THBS4P35443 961 aa7.26□□□□□ -1.25
SMC5-203ENST00000475540 IL6STP40189 918 aaPredicted RBP7.26□□□□□ -1.25
SMC5-203ENST00000475540 PTK2BQ14289 1009 aa7.26□□□□□ -1.25
SMC5-203ENST00000475540 AAK1Q2M2I8 961 aa7.26□□□□□ -1.25
SMC5-203ENST00000475540 ANXA2RQ3ZCQ2 193 aa7.26□□□□□ -1.25
SMC5-203ENST00000475540 DHRS13Q6UX07 377 aa7.26□□□□□ -1.25
SMC5-203ENST00000475540 FAM57BQ71RH2 274 aa7.26□□□□□ -1.25
SMC5-203ENST00000475540 FAM71BQ8TC56 605 aa7.26□□□□□ -1.25
SMC5-203ENST00000475540 MCRS1Q96EZ8 462 aa7.26□□□□□ -1.25
SMC5-203ENST00000475540 HMCESQ96FZ2 354 aa7.26□□□□□ -1.25
SMC5-203ENST00000475540 REXO5Q96IC2 774 aaKnown RBP7.26□□□□□ -1.25
SMC5-203ENST00000475540 GPR78Q96P69 363 aa7.26□□□□□ -1.25
SMC5-203ENST00000475540 TP63Q9H3D4 680 aaPredicted RBP7.26□□□□□ -1.25
SMC5-203ENST00000475540 CCDC134Q9H6E4 229 aa7.26□□□□□ -1.25
SMC5-203ENST00000475540 LOC105369274A0A096LPK9 316 aa7.25□□□□□ -1.25
SMC5-203ENST00000475540 LOC102723532A0A0G2JNH3 316 aa7.25□□□□□ -1.25
SMC5-203ENST00000475540 ABHD14A-ACY1A0A1B0GW23 586 aa7.25□□□□□ -1.25
SMC5-203ENST00000475540 SKAP2O75563 359 aaPredicted RBP7.25□□□□□ -1.25
SMC5-203ENST00000475540 SGPL1O95470 568 aa7.25□□□□□ -1.25
SMC5-203ENST00000475540 TMEM191BP0C7N4 346 aa7.25□□□□□ -1.25
SMC5-203ENST00000475540 CYP19A1P11511 503 aaPredicted RBP7.25□□□□□ -1.25
SMC5-203ENST00000475540 TFEBP19484 476 aa7.25□□□□□ -1.25
SMC5-203ENST00000475540 NR4A2P43354 598 aa7.25□□□□□ -1.25
SMC5-203ENST00000475540 DMWDQ09019 674 aa7.25□□□□□ -1.25
SMC5-203ENST00000475540 PFKFB4Q16877 469 aa7.25□□□□□ -1.25
SMC5-203ENST00000475540 C1orf228Q6PIY5 440 aa7.25□□□□□ -1.25
SMC5-203ENST00000475540 RHPN2Q8IUC4 686 aa7.25□□□□□ -1.25
SMC5-203ENST00000475540 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.25□□□□□ -1.25
SMC5-203ENST00000475540 ADGRF4Q8IZF3 695 aa7.25□□□□□ -1.25
SMC5-203ENST00000475540 OR4N4Q8N0Y3 316 aa7.25□□□□□ -1.25
SMC5-203ENST00000475540 STYXQ8WUJ0 223 aa7.25□□□□□ -1.25
SMC5-203ENST00000475540 RSC1A1Q92681 617 aa7.25□□□□□ -1.25
SMC5-203ENST00000475540 ERVK-5Q9HDB9 667 aa7.25□□□□□ -1.25
SMC5-203ENST00000475540 AFG3L2Q9Y4W6 797 aa7.25□□□□□ -1.25
SMC5-203ENST00000475540 SOCS2O14508 198 aa7.24□□□□□ -1.25
SMC5-203ENST00000475540 RPP40O75818 363 aaKnown RBP7.24□□□□□ -1.25
SMC5-203ENST00000475540 SOX2P48431 317 aa7.24□□□□□ -1.25
SMC5-203ENST00000475540 LAMB3Q13751 1172 aa7.24□□□□□ -1.25
SMC5-203ENST00000475540 MYLK4Q86YV6 388 aaPredicted RBP7.24□□□□□ -1.25
SMC5-203ENST00000475540 ABHD14AQ9BUJ0 271 aa7.24□□□□□ -1.25
SMC5-203ENST00000475540 PLCB1Q9NQ66 1216 aa7.24□□□□□ -1.25
SMC5-203ENST00000475540 TMEM45AQ9NWC5 275 aa7.24□□□□□ -1.25
SMC5-203ENST00000475540 DAAM1Q9Y4D1 1078 aa7.24□□□□□ -1.25
SMC5-203ENST00000475540 LGALS16A8MUM7 142 aa7.23□□□□□ -1.25
SMC5-203ENST00000475540 M0QYT0 321 aa7.23□□□□□ -1.25
SMC5-203ENST00000475540 CNOT3O75175 753 aaKnown RBP7.23□□□□□ -1.25
SMC5-203ENST00000475540 BMP15O95972 392 aa7.23□□□□□ -1.25
SMC5-203ENST00000475540 PRF1P14222 555 aa7.23□□□□□ -1.25
SMC5-203ENST00000475540 POLE2P56282 527 aa7.23□□□□□ -1.25
SMC5-203ENST00000475540 PUM3Q15397 648 aaKnown RBP7.23□□□□□ -1.25
SMC5-203ENST00000475540 ZACNQ401N2 412 aa7.23□□□□□ -1.25
SMC5-203ENST00000475540 ATPAF1Q5TC12 328 aaPredicted RBP7.23□□□□□ -1.25
SMC5-203ENST00000475540 LIPMQ5VYY2 423 aa7.23□□□□□ -1.25
SMC5-203ENST00000475540 SLC39A5Q6ZMH5 540 aa7.23□□□□□ -1.25
SMC5-203ENST00000475540 ZNF793Q6ZN11 406 aa7.23□□□□□ -1.25
SMC5-203ENST00000475540 SAMD3Q8N6K7 520 aa7.23□□□□□ -1.25
SMC5-203ENST00000475540 ADPRHL1Q8NDY3 354 aa7.23□□□□□ -1.25
SMC5-203ENST00000475540 ZNF48Q96MX3 618 aaPredicted RBP7.23□□□□□ -1.25
SMC5-203ENST00000475540 MPHOSPH6Q99547 160 aaKnown RBP7.23□□□□□ -1.25
SMC5-203ENST00000475540 TRMOQ9BU70 441 aa7.23□□□□□ -1.25
SMC5-203ENST00000475540 TUBB6Q9BUF5 446 aa7.23□□□□□ -1.25
SMC5-203ENST00000475540 SFXN1Q9H9B4 322 aa7.23□□□□□ -1.25
SMC5-203ENST00000475540 MOV10Q9HCE1 1003 aaKnown RBP7.23□□□□□ -1.25
SMC5-203ENST00000475540 SLC12A4Q9UP95 1085 aa7.23□□□□□ -1.25
SMC5-203ENST00000475540 ZBTB1Q9Y2K1 713 aa7.23□□□□□ -1.25
SMC5-203ENST00000475540 C3orf70A6NLC5 250 aaPredicted RBP7.22□□□□□ -1.25
SMC5-203ENST00000475540 KIF28PB7ZC32 967 aa7.22□□□□□ -1.25
SMC5-203ENST00000475540 TNFRSF6BO95407 300 aa7.22□□□□□ -1.25
SMC5-203ENST00000475540 LARGE1O95461 756 aa7.22□□□□□ -1.25
SMC5-203ENST00000475540 RFPL3SP0C7P2 107 aa7.22□□□□□ -1.25
SMC5-203ENST00000475540 GRK5P34947 590 aa7.22□□□□□ -1.25
SMC5-203ENST00000475540 SLC37A1P57057 533 aa7.22□□□□□ -1.25
SMC5-203ENST00000475540 TLE3Q04726 772 aa7.22□□□□□ -1.25
SMC5-203ENST00000475540 ICA1Q05084 483 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms