RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 SIX6OS1Q8N1H7 587 aa25.98■■□□□ 1.75
TMEM54-205ENST00000475208 UBA3Q8TBC4 463 aa25.98■■□□□ 1.75
TMEM54-205ENST00000475208 TMEM245Q9H330 911 aa25.98■■□□□ 1.75
TMEM54-205ENST00000475208 C6orf106Q9H6K1 298 aaPredicted RBP25.98■■□□□ 1.75
TMEM54-205ENST00000475208 ABCB8Q9NUT2 735 aa25.98■■□□□ 1.75
TMEM54-205ENST00000475208 STOML2Q9UJZ1 356 aa25.98■■□□□ 1.75
TMEM54-205ENST00000475208 COQ4Q9Y3A0 265 aa25.98■■□□□ 1.75
TMEM54-205ENST00000475208 A0A1B0GVT2 93 aa25.97■■□□□ 1.75
TMEM54-205ENST00000475208 YJEFN3A6XGL0 299 aa25.97■■□□□ 1.75
TMEM54-205ENST00000475208 E7ENQ6 273 aa25.97■■□□□ 1.75
TMEM54-205ENST00000475208 MSI1O43347 362 aaKnown RBP25.97■■□□□ 1.75
TMEM54-205ENST00000475208 LATS1O95835 1130 aa25.97■■□□□ 1.75
TMEM54-205ENST00000475208 ADGRF1Q5T601 910 aa25.97■■□□□ 1.75
TMEM54-205ENST00000475208 SLCO6A1Q86UG4 719 aa25.97■■□□□ 1.75
TMEM54-205ENST00000475208 TMA16Q96EY4 203 aaKnown RBP25.97■■□□□ 1.75
TMEM54-205ENST00000475208 GGA2Q9UJY4 613 aa25.97■■□□□ 1.75
TMEM54-205ENST00000475208 PLA2G4CQ9UP65 541 aa25.97■■□□□ 1.75
TMEM54-205ENST00000475208 SLCO1B1Q9Y6L6 691 aa25.97■■□□□ 1.75
TMEM54-205ENST00000475208 ANKRD11Q6UB99 2663 aaPredicted RBP25.96■■□□□ 1.75
TMEM54-205ENST00000475208 PABPC1P11940 636 aaKnown RBP25.96■■□□□ 1.75
TMEM54-205ENST00000475208 ACSL1P33121 698 aa25.96■■□□□ 1.75
TMEM54-205ENST00000475208 SGSHP51688 502 aa25.96■■□□□ 1.75
TMEM54-205ENST00000475208 YWHAEP62258 255 aaKnown RBP25.96■■□□□ 1.75
TMEM54-205ENST00000475208 COL9A2Q14055 689 aaPredicted RBP25.96■■□□□ 1.75
TMEM54-205ENST00000475208 CCNI2Q6ZMN8 369 aaPredicted RBP25.96■■□□□ 1.75
TMEM54-205ENST00000475208 ADIPOR2Q86V24 386 aa25.96■■□□□ 1.75
TMEM54-205ENST00000475208 AHI1Q8N157 1196 aa25.96■■□□□ 1.75
TMEM54-205ENST00000475208 DDX51Q8N8A6 666 aaKnown RBP eCLIP25.96■■□□□ 1.75
TMEM54-205ENST00000475208 SCAND2PQ9GZW5 306 aaPredicted RBP25.96■■□□□ 1.75
TMEM54-205ENST00000475208 O00370 1275 aa25.95■■□□□ 1.74
TMEM54-205ENST00000475208 SLC16A3O15427 465 aaKnown RBP25.95■■□□□ 1.74
TMEM54-205ENST00000475208 SETSIPP0DME0 302 aa25.95■■□□□ 1.74
TMEM54-205ENST00000475208 VDRP11473 427 aa25.95■■□□□ 1.74
TMEM54-205ENST00000475208 CSNK1EP49674 416 aaKnown RBP25.95■■□□□ 1.74
TMEM54-205ENST00000475208 AFF3P51826 1226 aaKnown RBP25.95■■□□□ 1.74
TMEM54-205ENST00000475208 NUMA1Q14980 2115 aa25.95■■□□□ 1.74
TMEM54-205ENST00000475208 PTPRNQ16849 979 aa25.95■■□□□ 1.74
TMEM54-205ENST00000475208 BAHD1Q8TBE0 780 aaPredicted RBP25.95■■□□□ 1.74
TMEM54-205ENST00000475208 KCTD13Q8WZ19 329 aa25.95■■□□□ 1.74
TMEM54-205ENST00000475208 CCDC34Q96HJ3 373 aa25.95■■□□□ 1.74
TMEM54-205ENST00000475208 CNGB3Q9NQW8 809 aa25.95■■□□□ 1.74
TMEM54-205ENST00000475208 ABCC13Q9NSE7 274 aa25.95■■□□□ 1.74
TMEM54-205ENST00000475208 ZBTB32Q9Y2Y4 487 aaPredicted RBP25.95■■□□□ 1.74
TMEM54-205ENST00000475208 PCDHGB2Q9Y5G2 931 aa25.95■■□□□ 1.74
TMEM54-205ENST00000475208 FLRT2O43155 660 aa25.94■■□□□ 1.74
TMEM54-205ENST00000475208 C7P10643 843 aa25.94■■□□□ 1.74
TMEM54-205ENST00000475208 LCP1P13796 627 aa25.94■■□□□ 1.74
TMEM54-205ENST00000475208 PRCPP42785 496 aa25.94■■□□□ 1.74
TMEM54-205ENST00000475208 DAOAP59103 153 aa25.94■■□□□ 1.74
TMEM54-205ENST00000475208 PNOCQ13519 176 aa25.94■■□□□ 1.74
TMEM54-205ENST00000475208 MBLAC2Q68D91 279 aa25.94■■□□□ 1.74
TMEM54-205ENST00000475208 KIAA0907Q7Z7F0 614 aaPredicted RBP25.94■■□□□ 1.74
TMEM54-205ENST00000475208 ZC3H3Q8IXZ2 948 aaKnown RBP25.94■■□□□ 1.74
TMEM54-205ENST00000475208 UBR7Q8N806 425 aa25.94■■□□□ 1.74
TMEM54-205ENST00000475208 WFDC5Q8TCV5 224 aa25.94■■□□□ 1.74
TMEM54-205ENST00000475208 TSG101Q99816 390 aa25.94■■□□□ 1.74
TMEM54-205ENST00000475208 FBRSQ9HAH7 460 aa25.94■■□□□ 1.74
TMEM54-205ENST00000475208 PRSS16Q9NQE7 514 aa25.94■■□□□ 1.74
TMEM54-205ENST00000475208 BAHCC1Q9P281 2608 aa25.93■■□□□ 1.74
TMEM54-205ENST00000475208 SEMA4FO95754 770 aa25.93■■□□□ 1.74
TMEM54-205ENST00000475208 RPS14P62263 151 aaKnown RBP25.93■■□□□ 1.74
TMEM54-205ENST00000475208 LRMPQ12912 555 aa25.93■■□□□ 1.74
TMEM54-205ENST00000475208 KIF19Q2TAC6 998 aa25.93■■□□□ 1.74
TMEM54-205ENST00000475208 PKDCCQ504Y2 493 aa25.93■■□□□ 1.74
TMEM54-205ENST00000475208 MSANTD2Q6P1R3 559 aa25.93■■□□□ 1.74
TMEM54-205ENST00000475208 SCML4Q8N228 414 aa25.93■■□□□ 1.74
TMEM54-205ENST00000475208 RHBDD1Q8TEB9 315 aa25.93■■□□□ 1.74
TMEM54-205ENST00000475208 BTBD1Q9H0C5 482 aa25.93■■□□□ 1.74
TMEM54-205ENST00000475208 CCDC86Q9H6F5 360 aaKnown RBP25.93■■□□□ 1.74
TMEM54-205ENST00000475208 GDPD2Q9HCC8 539 aa25.93■■□□□ 1.74
TMEM54-205ENST00000475208 RMND1Q9NWS8 449 aa25.93■■□□□ 1.74
TMEM54-205ENST00000475208 KIAA1522Q9P206 1035 aaPredicted RBP25.93■■□□□ 1.74
TMEM54-205ENST00000475208 ATP6V1DQ9Y5K8 247 aa25.93■■□□□ 1.74
TMEM54-205ENST00000475208 PLXNB3Q9ULL4 1909 aa25.92■■□□□ 1.74
TMEM54-205ENST00000475208 DNTTP04053 509 aa25.92■■□□□ 1.74
TMEM54-205ENST00000475208 ATP5BP06576 529 aaKnown RBP25.92■■□□□ 1.74
TMEM54-205ENST00000475208 DLDP09622 509 aaKnown RBP25.92■■□□□ 1.74
TMEM54-205ENST00000475208 TBXAS1P24557 533 aaPredicted RBP25.92■■□□□ 1.74
TMEM54-205ENST00000475208 RGS7P49802 495 aa25.92■■□□□ 1.74
TMEM54-205ENST00000475208 FKBP3Q00688 224 aaKnown RBP25.92■■□□□ 1.74
TMEM54-205ENST00000475208 ZBTB16Q05516 673 aa25.92■■□□□ 1.74
TMEM54-205ENST00000475208 TEAD4Q15561 434 aa25.92■■□□□ 1.74
TMEM54-205ENST00000475208 RFWD3Q6PCD5 774 aa25.92■■□□□ 1.74
TMEM54-205ENST00000475208 DBX2Q6ZNG2 339 aa25.92■■□□□ 1.74
TMEM54-205ENST00000475208 CDC6Q99741 560 aa25.92■■□□□ 1.74
TMEM54-205ENST00000475208 TM9SF3Q9HD45 589 aa25.92■■□□□ 1.74
TMEM54-205ENST00000475208 TOR4AQ9NXH8 423 aa25.92■■□□□ 1.74
TMEM54-205ENST00000475208 KIAA1257Q9ULG3 409 aa25.92■■□□□ 1.74
TMEM54-205ENST00000475208 SNX11Q9Y5W9 270 aa25.92■■□□□ 1.74
TMEM54-205ENST00000475208 TBL1XO60907 577 aa25.91■■□□□ 1.74
TMEM54-205ENST00000475208 IGLV3-27P01718 113 aa25.91■■□□□ 1.74
TMEM54-205ENST00000475208 ATXN1LP0C7T5 689 aaKnown RBP25.91■■□□□ 1.74
TMEM54-205ENST00000475208 CD70P32970 193 aa25.91■■□□□ 1.74
TMEM54-205ENST00000475208 PMS1P54277 932 aaKnown RBP25.91■■□□□ 1.74
TMEM54-205ENST00000475208 TTC31Q49AM3 519 aaPredicted RBP25.91■■□□□ 1.74
TMEM54-205ENST00000475208 PIK3R6Q5UE93 754 aa25.91■■□□□ 1.74
TMEM54-205ENST00000475208 ANKRD40Q6AI12 368 aa25.91■■□□□ 1.74
TMEM54-205ENST00000475208 LCLAT1Q6UWP7 414 aa25.91■■□□□ 1.74
TMEM54-205ENST00000475208 TFAP2BQ92481 460 aa25.91■■□□□ 1.74
TMEM54-205ENST00000475208 SLC35C1Q96A29 364 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms