RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 BCAMP50895 628 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 HIRAP54198 1017 aaPredicted RBP4.23□□□□□ -1.73
USP16-205ENST00000474835 GDF10P55107 478 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 GABARAPL2P60520 117 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 NOMO3P69849 1222 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 GALK2Q01415 458 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 SLC14A2Q15849 920 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 CNGA3Q16281 694 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 DALRD3Q5D0E6 543 aaKnown RBP4.23□□□□□ -1.73
USP16-205ENST00000474835 HP1BP3Q5SSJ5 553 aaPredicted RBP4.23□□□□□ -1.73
USP16-205ENST00000474835 FAM109BQ6ICB4 259 aaPredicted RBP4.23□□□□□ -1.73
USP16-205ENST00000474835 FAM45BPQ6NSW5 357 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 TATDN1Q6P1N9 297 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 C16orf46Q6P387 395 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 HTR3DQ70Z44 454 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 GPR155Q7Z3F1 870 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 PRPF39Q86UA1 669 aaKnown RBP4.23□□□□□ -1.73
USP16-205ENST00000474835 DCP2Q8IU60 420 aaKnown RBP4.23□□□□□ -1.73
USP16-205ENST00000474835 KIAA0319LQ8IZA0 1049 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 PARP8Q8N3A8 854 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 BEND7Q8N7W2 519 aaPredicted RBP4.23□□□□□ -1.73
USP16-205ENST00000474835 OR6F1Q8NGZ6 308 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 FAM45AQ8TCE6 357 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 SLC16A10Q8TF71 515 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 TAF4BQ92750 862 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 HSFY1Q96LI6 401 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 RBM15Q96T37 977 aaKnown RBP eCLIP4.23□□□□□ -1.732e-7■■■■□ 20.3
USP16-205ENST00000474835 TRIM55Q9BYV6 548 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 NACAP1Q9BZK3 213 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 CPNE5Q9HCH3 593 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 KCNQ5Q9NR82 932 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 ATAD3AQ9NVI7 634 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 TRAPPC4Q9Y296 219 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 TDRKHQ9Y2W6 561 aaKnown RBP4.23□□□□□ -1.73
USP16-205ENST00000474835 TCRBV9S1A1TA0A576 114 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 SLC35F4A4IF30 521 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 CXorf49A8MYA2 514 aaPredicted RBP4.22□□□□□ -1.73
USP16-205ENST00000474835 CACNG3O60359 315 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 UFL1O94874 794 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 PGM3O95394 542 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 PRR35P0CG20 571 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 TCF4P15884 667 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 CSTF2P33240 577 aaKnown RBP eCLIP4.22□□□□□ -1.73
USP16-205ENST00000474835 PTPN9P43378 593 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 HCAR3P49019 387 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 SLC26A2P50443 739 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 INCA1Q0VD86 236 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 AIMP1Q12904 312 aaKnown RBP4.22□□□□□ -1.73
USP16-205ENST00000474835 COG2Q14746 738 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 BOLA3Q53S33 107 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 AARS2Q5JTZ9 985 aaKnown RBP4.22□□□□□ -1.73
USP16-205ENST00000474835 SUSD4Q5VX71 490 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 TOM1L2Q6ZVM7 507 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 PGAM4Q8N0Y7 254 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 LSMEM1Q8N8F7 131 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 CATSPER1Q8NEC5 780 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 IL17RDQ8NFM7 739 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 EEF2KMTQ96G04 330 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 ANKRD36BP1Q96IX9 119 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 SNX18Q96RF0 628 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 TMEM117Q9H0C3 514 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 ATP13A3Q9H7F0 1226 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 PNPLA3Q9NST1 481 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 ZHX2Q9Y6X8 837 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 MYOCOSA0A1B0GUC4 107 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 KLRG2A4D1S0 409 aaPredicted RBP4.22□□□□□ -1.73
USP16-205ENST00000474835 EIF4E1BA6NMX2 242 aaKnown RBP4.22□□□□□ -1.73
USP16-205ENST00000474835 TBKBP1A7MCY6 615 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 E9PMD0 336 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 H0Y3Z8 333 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 PFDN6O15212 129 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 CHADO15335 359 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 THAP12O43422 761 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 TBC1D4O60343 1298 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 SNX4O95219 450 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 RASAL1O95294 804 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 ACSL3O95573 720 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 F9P00740 461 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 ADRB2P07550 413 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 H2AFB1P0C5Y9 115 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 H2AFB2P0C5Z0 115 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 CHRNB1P11230 501 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 ZNF30P17039 623 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 IBSPP21815 317 aaPredicted RBP4.22□□□□□ -1.73
USP16-205ENST00000474835 WEE1P30291 646 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 TTKP33981 857 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 UGT2B10P36537 528 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 EIF2DP41214 584 aaKnown RBP4.22□□□□□ -1.73
USP16-205ENST00000474835 ATP4BP51164 291 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 NAA20P61599 178 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 RHDQ02161 417 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 SEPT6Q14141 434 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 RAB39AQ14964 217 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 CALCRLQ16602 461 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 TOR1AIP1Q5JTV8 583 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 TSTD2Q5T7W7 516 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 SOGA3Q5TF21 947 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 IZUMO3Q5VZ72 239 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 MAMSTRQ6ZN01 415 aa4.22□□□□□ -1.73
USP16-205ENST00000474835 OTOP1Q7RTM1 612 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms